| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476243
Identifier: 186476243
GI number: 186476243
Start: 1676280
End: 1677263
Strand: Reverse
Name: 186476243
Synonym: Bphy_1485
Alternate gene names: NA
Gene position: 1677263-1676280 (Counterclockwise)
Preceding gene: 186476244
Following gene: 186476242
Centisome position: 48.21
GC content: 60.87
Gene sequence:
>984_bases ATGTTCCACCTGATCGCTTCTAGCCTGGATAGCGTCATTTCGTCGATCCAGACGCTGTTGTATGTCGACGTGGTGCAGCC GCTGCTGTTCCGCCTCGACCTGATGGACTACGACGAAGACACGTACGACAGCCTTTACTGGGTGATCGTCGGCGTGCTGG AAGTGCTCGCGATGTACGCGCTGCTGCGTCCGCTGGAGGCGTTGCGTCCCGTCGAACAATGGAAGGACCGGAAGGCCGTG CGCGTCGACGTGCTCTATACGTGGATCGCGAAACTCGGCATTCTCAACCTGTTTTTCTTCTTCGCGTTGCAGCCGTTTTT CGATTCGGTACAGGGCTGGTTCCGCCTGCACGGCATCGCAAACATCGAACTCGACAACCTCTGGCCGGGCGTGACGACGC AGCCATTCATCACGTTCGTCATGTATCTGCTCGTGCTCGATTTCGCGGGCTACTGGTATCACCGGGGCGAGCACAAGATC GGCGTGTGGTGGGAGTTGCACGCGGTGCATCACAGCCAGCAGCAGATGTCGCTGTGGGCCGACGACCGCAACCATCTGCT CGACGATCTGCTGCAGGCATGCTTCTTCGCGGTAATCGCGCTGTTCATCGGCGTGCCGCCGTCGCAGTTCGTCGCGCTCG TCGCGATCACGAACCTCGCGCAAAGTGTGCAGCACGCGAACATCCGGCTGTATTTCGGCTGGCTCGGCGAGCGCTTGCTC GTCAGCCCGACGTTTCATCGACGCCATCATGCGATCGGCTACGGCCACGAAGGGCTCAAGTACGGCTGCAATTTCGGCGT GCTGTTTCCGTGGTGGGACATTCTGTTCGGCAGCGCGTCGTGGAGCCGCGAAATGGAACCGACGGGCATTCGCGACCAAT TGAGCGGACGCCGCTACGGCGAGGGTTTCTGGGCTCAGCATTGGCTCGCGTTCGTGCGCATCGCGGAGCGCATGTCCGGC AAAAAGCAGCGGGGCACGGCGTAA
Upstream 100 bases:
>100_bases CGCGCCGAACGGGGCGTAACGCGTAACGCGTGACGCAGCGGCGGCGCGCCTTGCCGGCGCGCCGCACAGTGACGCAGAAC ATCGACGCATATAGAGCCAC
Downstream 100 bases:
>100_bases GCGCGCCGGCGCGCATCCCGATCCCTTGTGCGCCAGTCGGGGACGGGCGAGTGTGGCCTCGAAAGCGTTGCGGTGAAGCG CGTGTGAAGACCGCGTGACG
Product: fatty acid hydroxylase
Products: NA
Alternate protein names: Sterol Desaturase; Transmembrane Protein; Sterol Desaturase-Related Protein; Sterol Desaturase Protein; Sterol Desaturase Family Protein; Sterol Desaturase-Like Protein; Sterol Desaturase-Like; YhhN Family Protein; YhhN-Like Protein; Fatty Acid Hydroxylase Superfamily; TRAP Dicarboxylate Transporter DctM Subunit
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MFHLIASSLDSVISSIQTLLYVDVVQPLLFRLDLMDYDEDTYDSLYWVIVGVLEVLAMYALLRPLEALRPVEQWKDRKAV RVDVLYTWIAKLGILNLFFFFALQPFFDSVQGWFRLHGIANIELDNLWPGVTTQPFITFVMYLLVLDFAGYWYHRGEHKI GVWWELHAVHHSQQQMSLWADDRNHLLDDLLQACFFAVIALFIGVPPSQFVALVAITNLAQSVQHANIRLYFGWLGERLL VSPTFHRRHHAIGYGHEGLKYGCNFGVLFPWWDILFGSASWSREMEPTGIRDQLSGRRYGEGFWAQHWLAFVRIAERMSG KKQRGTA
Sequences:
>Translated_327_residues MFHLIASSLDSVISSIQTLLYVDVVQPLLFRLDLMDYDEDTYDSLYWVIVGVLEVLAMYALLRPLEALRPVEQWKDRKAV RVDVLYTWIAKLGILNLFFFFALQPFFDSVQGWFRLHGIANIELDNLWPGVTTQPFITFVMYLLVLDFAGYWYHRGEHKI GVWWELHAVHHSQQQMSLWADDRNHLLDDLLQACFFAVIALFIGVPPSQFVALVAITNLAQSVQHANIRLYFGWLGERLL VSPTFHRRHHAIGYGHEGLKYGCNFGVLFPWWDILFGSASWSREMEPTGIRDQLSGRRYGEGFWAQHWLAFVRIAERMSG KKQRGTA >Mature_327_residues MFHLIASSLDSVISSIQTLLYVDVVQPLLFRLDLMDYDEDTYDSLYWVIVGVLEVLAMYALLRPLEALRPVEQWKDRKAV RVDVLYTWIAKLGILNLFFFFALQPFFDSVQGWFRLHGIANIELDNLWPGVTTQPFITFVMYLLVLDFAGYWYHRGEHKI GVWWELHAVHHSQQQMSLWADDRNHLLDDLLQACFFAVIALFIGVPPSQFVALVAITNLAQSVQHANIRLYFGWLGERLL VSPTFHRRHHAIGYGHEGLKYGCNFGVLFPWWDILFGSASWSREMEPTGIRDQLSGRRYGEGFWAQHWLAFVRIAERMSG KKQRGTA
Specific function: Unknown
COG id: COG3000
COG function: function code I; Sterol desaturase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37997; Mature: 37997
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHLIASSLDSVISSIQTLLYVDVVQPLLFRLDLMDYDEDTYDSLYWVIVGVLEVLAMYA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LLRPLEALRPVEQWKDRKAVRVDVLYTWIAKLGILNLFFFFALQPFFDSVQGWFRLHGIA HHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE NIELDNLWPGVTTQPFITFVMYLLVLDFAGYWYHRGEHKIGVWWELHAVHHSQQQMSLWA EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHH DDRNHLLDDLLQACFFAVIALFIGVPPSQFVALVAITNLAQSVQHANIRLYFGWLGERLL CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHE VSPTFHRRHHAIGYGHEGLKYGCNFGVLFPWWDILFGSASWSREMEPTGIRDQLSGRRYG ECCCHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCC EGFWAQHWLAFVRIAERMSGKKQRGTA CCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MFHLIASSLDSVISSIQTLLYVDVVQPLLFRLDLMDYDEDTYDSLYWVIVGVLEVLAMYA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LLRPLEALRPVEQWKDRKAVRVDVLYTWIAKLGILNLFFFFALQPFFDSVQGWFRLHGIA HHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE NIELDNLWPGVTTQPFITFVMYLLVLDFAGYWYHRGEHKIGVWWELHAVHHSQQQMSLWA EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHH DDRNHLLDDLLQACFFAVIALFIGVPPSQFVALVAITNLAQSVQHANIRLYFGWLGERLL CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHE VSPTFHRRHHAIGYGHEGLKYGCNFGVLFPWWDILFGSASWSREMEPTGIRDQLSGRRYG ECCCHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCC EGFWAQHWLAFVRIAERMSGKKQRGTA CCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA