| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476242
Identifier: 186476242
GI number: 186476242
Start: 1675192
End: 1676061
Strand: Reverse
Name: 186476242
Synonym: Bphy_1484
Alternate gene names: NA
Gene position: 1676061-1675192 (Counterclockwise)
Preceding gene: 186476243
Following gene: 186476241
Centisome position: 48.17
GC content: 64.25
Gene sequence:
>870_bases ATGAATGACCTCTTGCGCTCGTTTGGGCGCGCGCTTTCTTCGGTGCTCCATCCGCGCATGCTATGGCTGACGTTCATGCC GTTCGCAGCAGCCGCGATCGTCTGGGGCGTTGTGCTGTGGTTTTCCTGGCAGACCCTGATCGGCGCGACGCGCGGCTGGC TCGAAAGCTGGCCGCTGACGACGACGCTCTACGGCCTGTTCGACTGGCTCGGCTTTTCGTCGCTGCACGCGGCCGTCGCG CCGTTCATCGTGATCGCCATGGTGATTCCGCTGATCGTCGTCACGGTGCTGCTGCTGATCGCGACGCTGTCGATGCCGGC CGTCATCAGGCATCTGTCGAAGCGGCAGTTCGCGGGTCTGGAGATGCGGCGCGGCGGCACATGGTTCGGCAGTGTGGTGC ATTCCATCTGGACAACGCTCGTGTGTCTGCTCGTGCTGGTGATCACGCTGCCGCTCTGGCTGATCCCGCCGTTCTTCGCA CTGATTCCGCCGCTGCTGTGGGGCTGGCTGACCTATCGCGTGATGACGTACGACGCGCTGTCACTGCACGCAAGCTACGA GGAGCGACGCGCGCTGGTGCGCCAGCATCGGCTGCCGCTGCTGCTGATCGGCGTGGCGAGCGGTTTGCTAGGTTCGCTGC CGACGCTGATCTGGGCGTCGTCCGTGTGGCTGATCGTGCTGTTCCCTGTGATGACCGCGGTGACCATCTGGATCTATGCT TTCATCCTCGTGTTTACGGCGCTGTGGTTCGGCTATTACTGCCTGCGTGCGCTGCAGCGAATGCGCGCCGACGAGCACGG CGGCAACGGCCATCATCACGGTCCCCACGGACCTCATGGCGCACGCGGCACAGCGCCCGTTTCCTACTGA
Upstream 100 bases:
>100_bases TCAAACGTCGTTCGCGCTTTCGAACGCCGACGCCCGACGTGGTTTATCCTGTCCACGTTTCCTTCCTTTTCCTGCCTGCT TCCCTCGTCATCGACTACGA
Downstream 100 bases:
>100_bases CAAGAGGCAGCAATGGCATTTGGCGTCATCATCATCGGCGATGAAATCCTGTCCGGCAGGCGTGTCGACAAGCATTTGCC GAAGGTCATCCAGCTTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MNDLLRSFGRALSSVLHPRMLWLTFMPFAAAAIVWGVVLWFSWQTLIGATRGWLESWPLTTTLYGLFDWLGFSSLHAAVA PFIVIAMVIPLIVVTVLLLIATLSMPAVIRHLSKRQFAGLEMRRGGTWFGSVVHSIWTTLVCLLVLVITLPLWLIPPFFA LIPPLLWGWLTYRVMTYDALSLHASYEERRALVRQHRLPLLLIGVASGLLGSLPTLIWASSVWLIVLFPVMTAVTIWIYA FILVFTALWFGYYCLRALQRMRADEHGGNGHHHGPHGPHGARGTAPVSY
Sequences:
>Translated_289_residues MNDLLRSFGRALSSVLHPRMLWLTFMPFAAAAIVWGVVLWFSWQTLIGATRGWLESWPLTTTLYGLFDWLGFSSLHAAVA PFIVIAMVIPLIVVTVLLLIATLSMPAVIRHLSKRQFAGLEMRRGGTWFGSVVHSIWTTLVCLLVLVITLPLWLIPPFFA LIPPLLWGWLTYRVMTYDALSLHASYEERRALVRQHRLPLLLIGVASGLLGSLPTLIWASSVWLIVLFPVMTAVTIWIYA FILVFTALWFGYYCLRALQRMRADEHGGNGHHHGPHGPHGARGTAPVSY >Mature_289_residues MNDLLRSFGRALSSVLHPRMLWLTFMPFAAAAIVWGVVLWFSWQTLIGATRGWLESWPLTTTLYGLFDWLGFSSLHAAVA PFIVIAMVIPLIVVTVLLLIATLSMPAVIRHLSKRQFAGLEMRRGGTWFGSVVHSIWTTLVCLLVLVITLPLWLIPPFFA LIPPLLWGWLTYRVMTYDALSLHASYEERRALVRQHRLPLLLIGVASGLLGSLPTLIWASSVWLIVLFPVMTAVTIWIYA FILVFTALWFGYYCLRALQRMRADEHGGNGHHHGPHGPHGARGTAPVSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32476; Mature: 32476
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLLRSFGRALSSVLHPRMLWLTFMPFAAAAIVWGVVLWFSWQTLIGATRGWLESWPLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH TTLYGLFDWLGFSSLHAAVAPFIVIAMVIPLIVVTVLLLIATLSMPAVIRHLSKRQFAGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EMRRGGTWFGSVVHSIWTTLVCLLVLVITLPLWLIPPFFALIPPLLWGWLTYRVMTYDAL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLHASYEERRALVRQHRLPLLLIGVASGLLGSLPTLIWASSVWLIVLFPVMTAVTIWIYA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FILVFTALWFGYYCLRALQRMRADEHGGNGHHHGPHGPHGARGTAPVSY HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNDLLRSFGRALSSVLHPRMLWLTFMPFAAAAIVWGVVLWFSWQTLIGATRGWLESWPLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH TTLYGLFDWLGFSSLHAAVAPFIVIAMVIPLIVVTVLLLIATLSMPAVIRHLSKRQFAGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EMRRGGTWFGSVVHSIWTTLVCLLVLVITLPLWLIPPFFALIPPLLWGWLTYRVMTYDAL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLHASYEERRALVRQHRLPLLLIGVASGLLGSLPTLIWASSVWLIVLFPVMTAVTIWIYA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FILVFTALWFGYYCLRALQRMRADEHGGNGHHHGPHGPHGARGTAPVSY HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA