Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476149

Identifier: 186476149

GI number: 186476149

Start: 1564087

End: 1564983

Strand: Direct

Name: 186476149

Synonym: Bphy_1391

Alternate gene names: NA

Gene position: 1564087-1564983 (Clockwise)

Preceding gene: 186476142

Following gene: 186476150

Centisome position: 44.96

GC content: 65.66

Gene sequence:

>897_bases
GTGGCGAAAGACAGTCTGTGGTTCGACGGAACGCGCAGACCTTTTGTTAGAATGGGTCGGAGTATAACATCCCGACCTGA
GCCTATGAAACACTCCAGCGGCCGCGCGCGAGGCGCCACGCCCCTCTTCGCGACGGCGCTCCGTTCGACGCTTTTCTCGC
CGTCGGACGCATCGTGCCGCCGGCATTTGCTCGCGGCATTGCGCGCGGCAGCGGGCACGGCGTGCTGCGGTCTCGCCCTG
TTGATGCTGCCTGCCGCACCCGCCTTTGCGCAGAAAACGCAGACGGTTTCCCACGGCCCGGCCGTGCGCGATGTCACGCC
GGATGCCGACGCGTCCATTCAGGAGAAGAACTGGACGGCTGCCCTCGCGCAGCTCGACGCGCGCATCGCCGCCAATCCGC
GCGACGTGCAGGCCAAATTCAAGCGCGCCACGGTGCTCGCACGCCTGAATCGCGACGACGACGCCATCGCCGCATTCACG
GAACTCACGCAGACCTATCCCGAGCTGCCCGAGCCTTACAACAATCTCGCCGCGCTGTACGCGAAGCAGGGCCGCTACAC
GGAAGCGCGCGCCGCGCTCGAAACGGCTGTCAAGGCGAGCCCCGGCTACGGTCTCGCGTATGAGAATCTCGGCGACCTGT
ATCTGCGCCTCGCGGATCAGGCGTATCGCCGTGCGCAGAGTCTGGGTGCCGGCAACGGCACGACGAGCCAGCGCATCGCC
GACATCGAGAAAATCGTCTCGCCGCGTAAGACGGCCGTGAAGAAGACAAGCCAGCCGGCCGCCGAATCGGATTACACGAA
TCGCGCGACGCAGAACATCACGAACTCGCAGGGCTTCCAGTTTGGCGGGCCGAACGGTTCGCTCGCGACGCCGCCGTACG
TTGCACCATCGCAGTGA

Upstream 100 bases:

>100_bases
GCATGCAACTGCATGCACGAACACGGGCGGGCGGCATGACTGACAGCACGTCGCGCAACGGTGCGGGATCAGGCTGACGT
CGAAGCGGAGACGACCACGA

Downstream 100 bases:

>100_bases
GCGCTTGCGCGCATGCTTTCGGGCTGCGCGCCGGCCGACGCTTTTCATCTGAGTTCACCCTGCTTTCACCCCGAGGATTT
ACATGAAATGGTTGATGTTG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family Protein; Signal Peptide Protein; Tpr Repeat-Containing Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; TPR Domain-Containing Protein; Exported Protein

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MAKDSLWFDGTRRPFVRMGRSITSRPEPMKHSSGRARGATPLFATALRSTLFSPSDASCRRHLLAALRAAAGTACCGLAL
LMLPAAPAFAQKTQTVSHGPAVRDVTPDADASIQEKNWTAALAQLDARIAANPRDVQAKFKRATVLARLNRDDDAIAAFT
ELTQTYPELPEPYNNLAALYAKQGRYTEARAALETAVKASPGYGLAYENLGDLYLRLADQAYRRAQSLGAGNGTTSQRIA
DIEKIVSPRKTAVKKTSQPAAESDYTNRATQNITNSQGFQFGGPNGSLATPPYVAPSQ

Sequences:

>Translated_298_residues
MAKDSLWFDGTRRPFVRMGRSITSRPEPMKHSSGRARGATPLFATALRSTLFSPSDASCRRHLLAALRAAAGTACCGLAL
LMLPAAPAFAQKTQTVSHGPAVRDVTPDADASIQEKNWTAALAQLDARIAANPRDVQAKFKRATVLARLNRDDDAIAAFT
ELTQTYPELPEPYNNLAALYAKQGRYTEARAALETAVKASPGYGLAYENLGDLYLRLADQAYRRAQSLGAGNGTTSQRIA
DIEKIVSPRKTAVKKTSQPAAESDYTNRATQNITNSQGFQFGGPNGSLATPPYVAPSQ
>Mature_297_residues
AKDSLWFDGTRRPFVRMGRSITSRPEPMKHSSGRARGATPLFATALRSTLFSPSDASCRRHLLAALRAAAGTACCGLALL
MLPAAPAFAQKTQTVSHGPAVRDVTPDADASIQEKNWTAALAQLDARIAANPRDVQAKFKRATVLARLNRDDDAIAAFTE
LTQTYPELPEPYNNLAALYAKQGRYTEARAALETAVKASPGYGLAYENLGDLYLRLADQAYRRAQSLGAGNGTTSQRIAD
IEKIVSPRKTAVKKTSQPAAESDYTNRATQNITNSQGFQFGGPNGSLATPPYVAPSQ

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32015; Mature: 31884

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKDSLWFDGTRRPFVRMGRSITSRPEPMKHSSGRARGATPLFATALRSTLFSPSDASCR
CCCCCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH
RHLLAALRAAAGTACCGLALLMLPAAPAFAQKTQTVSHGPAVRDVTPDADASIQEKNWTA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
ALAQLDARIAANPRDVQAKFKRATVLARLNRDDDAIAAFTELTQTYPELPEPYNNLAALY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
AKQGRYTEARAALETAVKASPGYGLAYENLGDLYLRLADQAYRRAQSLGAGNGTTSQRIA
HHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
DIEKIVSPRKTAVKKTSQPAAESDYTNRATQNITNSQGFQFGGPNGSLATPPYVAPSQ
HHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKDSLWFDGTRRPFVRMGRSITSRPEPMKHSSGRARGATPLFATALRSTLFSPSDASCR
CCCCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH
RHLLAALRAAAGTACCGLALLMLPAAPAFAQKTQTVSHGPAVRDVTPDADASIQEKNWTA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
ALAQLDARIAANPRDVQAKFKRATVLARLNRDDDAIAAFTELTQTYPELPEPYNNLAALY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
AKQGRYTEARAALETAVKASPGYGLAYENLGDLYLRLADQAYRRAQSLGAGNGTTSQRIA
HHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
DIEKIVSPRKTAVKKTSQPAAESDYTNRATQNITNSQGFQFGGPNGSLATPPYVAPSQ
HHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA