| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is btuE [C]
Identifier: 186476112
GI number: 186476112
Start: 1520908
End: 1521396
Strand: Reverse
Name: btuE [C]
Synonym: Bphy_1354
Alternate gene names: 186476112
Gene position: 1521396-1520908 (Counterclockwise)
Preceding gene: 186476115
Following gene: 186476105
Centisome position: 43.73
GC content: 59.3
Gene sequence:
>489_bases ATGGCAGACAAGTCTTCGATTTATTCCTTCTCGGCGCGCACGCTGGACGGCGAGCCGGTCAGCTTCGAACGTTACAACGG CAAAGTGATGCTGATTGTCAACACGGCGAGCGAATGCGGTTTCACGCCGCAGTACGCCGGCTTGCAGAAGCTGCACGAGC AATACGCGGCGCGCGGGCTGCAGGTGCTGGGTTTTCCGTGCAACCAGTTCGGCAAGCAGGAGCCGGGCGATGCGGCGCAG ATCGGTGCGTTCTGCGAGAAGAACTATGGCGTGACGTTTCAGATGTTCGACAAGATAGACGTCAATGGTTCGGACGCGCA TCCGCTCTTCAGGTTCCTGAAGGACGAAGCGCCCGGCGTGCTCGGACTCGAAGCGATCAAATGGAATTTCACGAAGTTTC TGGTCGACCGCGACGGCAAGGTCGTCAAGCGCTACGCGCCCACCACGAAGCCCGAAACGATCACGGACGACATCGAGGCG CTGCTGTAA
Upstream 100 bases:
>100_bases TATTTTAGACTGCGCGGCGCACGCTCAGGCATTGGCCGATCGGCTAGGTGGCGCGCGGCCGCGGAGCCATTAGACTAACG ACATTCCTGGAGGGCGGCAC
Downstream 100 bases:
>100_bases CGGGCGTCAGAGAATCGGCGCGAACAAACGCGCAACGTGCATCAGCACGCGCCGCAGCGCCGGCGCGTTGCGATACTCGC TGCGGTCTATCTCGTACGAT
Product: glutathione peroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MADKSSIYSFSARTLDGEPVSFERYNGKVMLIVNTASECGFTPQYAGLQKLHEQYAARGLQVLGFPCNQFGKQEPGDAAQ IGAFCEKNYGVTFQMFDKIDVNGSDAHPLFRFLKDEAPGVLGLEAIKWNFTKFLVDRDGKVVKRYAPTTKPETITDDIEA LL
Sequences:
>Translated_162_residues MADKSSIYSFSARTLDGEPVSFERYNGKVMLIVNTASECGFTPQYAGLQKLHEQYAARGLQVLGFPCNQFGKQEPGDAAQ IGAFCEKNYGVTFQMFDKIDVNGSDAHPLFRFLKDEAPGVLGLEAIKWNFTKFLVDRDGKVVKRYAPTTKPETITDDIEA LL >Mature_161_residues ADKSSIYSFSARTLDGEPVSFERYNGKVMLIVNTASECGFTPQYAGLQKLHEQYAARGLQVLGFPCNQFGKQEPGDAAQI GAFCEKNYGVTFQMFDKIDVNGSDAHPLFRFLKDEAPGVLGLEAIKWNFTKFLVDRDGKVVKRYAPTTKPETITDDIEAL L
Specific function: Not Essential For B12 Transport; However, It Is An Auxiliary Component Of The Transport System. [C]
COG id: COG0386
COG function: function code O; Glutathione peroxidase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutathione peroxidase family [H]
Homologues:
Organism=Homo sapiens, GI75709200, Length=156, Percent_Identity=50, Blast_Score=152, Evalue=1e-37, Organism=Homo sapiens, GI90903240, Length=156, Percent_Identity=50, Blast_Score=151, Evalue=2e-37, Organism=Homo sapiens, GI192455698, Length=159, Percent_Identity=44.0251572327044, Blast_Score=142, Evalue=2e-34, Organism=Homo sapiens, GI15618997, Length=156, Percent_Identity=46.1538461538462, Blast_Score=136, Evalue=9e-33, Organism=Homo sapiens, GI90903238, Length=131, Percent_Identity=50.381679389313, Blast_Score=125, Evalue=2e-29, Organism=Homo sapiens, GI4557629, Length=185, Percent_Identity=41.0810810810811, Blast_Score=121, Evalue=2e-28, Organism=Homo sapiens, GI6006001, Length=182, Percent_Identity=37.9120879120879, Blast_Score=115, Evalue=2e-26, Organism=Homo sapiens, GI41406084, Length=186, Percent_Identity=40.3225806451613, Blast_Score=112, Evalue=1e-25, Organism=Homo sapiens, GI33186887, Length=173, Percent_Identity=38.150289017341, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI32967607, Length=181, Percent_Identity=35.3591160220994, Blast_Score=96, Evalue=1e-20, Organism=Homo sapiens, GI41406082, Length=70, Percent_Identity=54.2857142857143, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1788003, Length=168, Percent_Identity=43.452380952381, Blast_Score=152, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17506887, Length=159, Percent_Identity=49.0566037735849, Blast_Score=157, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17535473, Length=159, Percent_Identity=47.7987421383648, Blast_Score=154, Evalue=2e-38, Organism=Caenorhabditis elegans, GI193210707, Length=162, Percent_Identity=46.2962962962963, Blast_Score=143, Evalue=3e-35, Organism=Caenorhabditis elegans, GI71993584, Length=158, Percent_Identity=43.6708860759494, Blast_Score=139, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17550320, Length=185, Percent_Identity=35.1351351351351, Blast_Score=116, Evalue=5e-27, Organism=Caenorhabditis elegans, GI193209493, Length=182, Percent_Identity=32.967032967033, Blast_Score=110, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71993573, Length=95, Percent_Identity=41.0526315789474, Blast_Score=80, Evalue=5e-16, Organism=Caenorhabditis elegans, GI193210709, Length=72, Percent_Identity=50, Blast_Score=76, Evalue=8e-15, Organism=Caenorhabditis elegans, GI71999642, Length=76, Percent_Identity=38.1578947368421, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17507603, Length=101, Percent_Identity=35.6435643564356, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319721, Length=158, Percent_Identity=52.5316455696203, Blast_Score=187, Evalue=9e-49, Organism=Saccharomyces cerevisiae, GI6322228, Length=158, Percent_Identity=51.8987341772152, Blast_Score=184, Evalue=6e-48, Organism=Saccharomyces cerevisiae, GI6322826, Length=155, Percent_Identity=48.3870967741936, Blast_Score=159, Evalue=2e-40, Organism=Drosophila melanogaster, GI24656772, Length=162, Percent_Identity=47.5308641975309, Blast_Score=152, Evalue=1e-37, Organism=Drosophila melanogaster, GI24656767, Length=162, Percent_Identity=47.5308641975309, Blast_Score=151, Evalue=2e-37, Organism=Drosophila melanogaster, GI24656777, Length=160, Percent_Identity=48.125, Blast_Score=151, Evalue=2e-37, Organism=Drosophila melanogaster, GI85726443, Length=164, Percent_Identity=42.0731707317073, Blast_Score=130, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000889 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00255 GSHPx [H]
EC number: =1.11.1.9 [H]
Molecular weight: Translated: 18014; Mature: 17882
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00460 GLUTATHIONE_PEROXID_1 ; PS00763 GLUTATHIONE_PEROXID_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKSSIYSFSARTLDGEPVSFERYNGKVMLIVNTASECGFTPQYAGLQKLHEQYAARGL CCCCCCEEEEECCCCCCCCCEEEEECCEEEEEEECCHHCCCCCCHHHHHHHHHHHHHCCC QVLGFPCNQFGKQEPGDAAQIGAFCEKNYGVTFQMFDKIDVNGSDAHPLFRFLKDEAPGV EEEECCHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCE LGLEAIKWNFTKFLVDRDGKVVKRYAPTTKPETITDDIEALL EEHHHHHHHHEEEEECCCCCEEEECCCCCCCCCHHHHHHHCC >Mature Secondary Structure ADKSSIYSFSARTLDGEPVSFERYNGKVMLIVNTASECGFTPQYAGLQKLHEQYAARGL CCCCCEEEEECCCCCCCCCEEEEECCEEEEEEECCHHCCCCCCHHHHHHHHHHHHHCCC QVLGFPCNQFGKQEPGDAAQIGAFCEKNYGVTFQMFDKIDVNGSDAHPLFRFLKDEAPGV EEEECCHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCE LGLEAIKWNFTKFLVDRDGKVVKRYAPTTKPETITDDIEALL EEHHHHHHHHEEEEECCCCCEEEECCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]