| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476115
Identifier: 186476115
GI number: 186476115
Start: 1524645
End: 1524908
Strand: Reverse
Name: 186476115
Synonym: Bphy_1357
Alternate gene names: NA
Gene position: 1524908-1524645 (Counterclockwise)
Preceding gene: 186476116
Following gene: 186476112
Centisome position: 43.83
GC content: 63.64
Gene sequence:
>264_bases TTGAAACAGTCTCATCAATCCTCGGGCGAGTTTCTGTCGAATCTGCGCGGCTGCCGTGTGTCCGCACCCATTCAGGGGCC GTGGGGCGGCGGCTGCCGGATCGTCGAATGGATCGATACAGCCGGTCAGATTTCGCGGCGCGTCGTCGCGGAAAACGTGA CGGCTGACGAAGTGCGGGAAACCATCCGGCATCACGTGGAAGGCCGCAAGCACCGGTTGATCGACGACGAACGGGAGCCC CGGCAGACCTTGCCGCGGCGTTGA
Upstream 100 bases:
>100_bases GTAATCCGCTGTAAATTTCCGAACTCCCGCTGTAACCCAAGGGACTTTCGTTTTCCCTATCCTCGTGAGATGCAATGTCA CGAGCGGAAAGGAAGACGTC
Downstream 100 bases:
>100_bases ACCGGGCGCGAACTCATCTGCGCGGCACTCGCGGGCCTATTCGGATTCGGACGCCTCGTCGCCAGCCTGCGCGAGCAGCG CTTCCCGCGCGGCCTCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MKQSHQSSGEFLSNLRGCRVSAPIQGPWGGGCRIVEWIDTAGQISRRVVAENVTADEVRETIRHHVEGRKHRLIDDEREP RQTLPRR
Sequences:
>Translated_87_residues MKQSHQSSGEFLSNLRGCRVSAPIQGPWGGGCRIVEWIDTAGQISRRVVAENVTADEVRETIRHHVEGRKHRLIDDEREP RQTLPRR >Mature_87_residues MKQSHQSSGEFLSNLRGCRVSAPIQGPWGGGCRIVEWIDTAGQISRRVVAENVTADEVRETIRHHVEGRKHRLIDDEREP RQTLPRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9954; Mature: 9954
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSHQSSGEFLSNLRGCRVSAPIQGPWGGGCRIVEWIDTAGQISRRVVAENVTADEVRE CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH TIRHHVEGRKHRLIDDEREPRQTLPRR HHHHHHCCCCCCCCCCCCCHHHCCCCC >Mature Secondary Structure MKQSHQSSGEFLSNLRGCRVSAPIQGPWGGGCRIVEWIDTAGQISRRVVAENVTADEVRE CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH TIRHHVEGRKHRLIDDEREPRQTLPRR HHHHHHCCCCCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA