| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476105
Identifier: 186476105
GI number: 186476105
Start: 1513123
End: 1514124
Strand: Reverse
Name: 186476105
Synonym: Bphy_1347
Alternate gene names: NA
Gene position: 1514124-1513123 (Counterclockwise)
Preceding gene: 186476112
Following gene: 186476104
Centisome position: 43.52
GC content: 67.07
Gene sequence:
>1002_bases ATGAATCTCTCGCTGCGCAATACGTGGCCCACGCTCGCGATCATGATGGGCGCGTCCGTATGGGGCATGGTCTGGTATCC GCTGCGCATGCTCAACGCGCTCGGCTTGACGGGTACGGCGGCGAGCGCGCTGACGAGCGGCGCGGGCTGTCTGTTCGTCC TGCTCGTCCGCCGCAGCGCAATCAGAACGGTCCGCTGGCATTGGCTGCTGCCGGCGCTCGCGCTGTTTGCGGGTATCACC AATCTCGGCTTCGTGTGGGGCGCGATTCACGGTCAGGTGATGCGCGTGCTGCTGCTGTTCTATCTGACGCCCGCCTGGAC GGCGCTGTTCGCGCATTTCATCCTGCGCGAACGGCTGACGTGGTCGGGCGCAGCGCTCGCGGCGATGTCGCTGGCGGGTG CCATGATGATGTTGTGGTCGCCGCAACTGGGGCTGCCCGTTCCCGGCAGCCTGGCCGAATGGGCAGGGCTCGCGGCGGGC ATGTCGTTCGCGATGAGCAACGTGCTGATCCTCAAGACGAGCCGCGACTTGCCGGACATGCGCGCCGAGATGCGCACGGC CGTGATTTTCGGCGGCGCGGCGATCTTCGGCGCCTGCGCGTCGTACTTCGAATCGATGCCCGCCGCTCCGACGGGCGCAC ACGTCGGCGAGGCGGTACTGCTTGTGCTCGGTATCGGCTTCGCGCTCGCGACCAACAATATGCTCGTGCAATACGGGCTC GCGCGCGTGCCGGCGAACCGCGCGTCGATCATCATGCTGTTCGAGATCGTCGTGACGGCGCTGACGGCGTGGCTGTTCGC TGGCGAAGTGCCCGGTCCGCGCGAATGGGCGGGCGGCGCGTGCATCGTTTTGGCCTCTGCACTGTCGAGCTGGGTGCATC GCGCGAAGCCCGGCGAAGCGGCGGGTGCTGAAGGATCGGGCAATCGGCAGGACAACCCGGACGGCAACCTCGACCAAGAC CGGGATGGCGCCCGTAAGAATCGCCCACGCGCGATGGTATGA
Upstream 100 bases:
>100_bases ACTGCACGGTAAAGGTAAAGCATTCAGCGGCAGCGGCCGGCAACACACGAGGCAGACAGGTCATGCAAAACAGGCTGGAC ATTGGCGGGAGTGCTGCGCG
Downstream 100 bases:
>100_bases TTGCCCCTCATTGGCCAGCGGTGCAGCGTAGGGCGCGCCGCGGCGCCGGAATCGCAGCGGGCTCGCGCTACGTTGTGCCG CTTGCCGGGCAGGGAGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MNLSLRNTWPTLAIMMGASVWGMVWYPLRMLNALGLTGTAASALTSGAGCLFVLLVRRSAIRTVRWHWLLPALALFAGIT NLGFVWGAIHGQVMRVLLLFYLTPAWTALFAHFILRERLTWSGAALAAMSLAGAMMMLWSPQLGLPVPGSLAEWAGLAAG MSFAMSNVLILKTSRDLPDMRAEMRTAVIFGGAAIFGACASYFESMPAAPTGAHVGEAVLLVLGIGFALATNNMLVQYGL ARVPANRASIIMLFEIVVTALTAWLFAGEVPGPREWAGGACIVLASALSSWVHRAKPGEAAGAEGSGNRQDNPDGNLDQD RDGARKNRPRAMV
Sequences:
>Translated_333_residues MNLSLRNTWPTLAIMMGASVWGMVWYPLRMLNALGLTGTAASALTSGAGCLFVLLVRRSAIRTVRWHWLLPALALFAGIT NLGFVWGAIHGQVMRVLLLFYLTPAWTALFAHFILRERLTWSGAALAAMSLAGAMMMLWSPQLGLPVPGSLAEWAGLAAG MSFAMSNVLILKTSRDLPDMRAEMRTAVIFGGAAIFGACASYFESMPAAPTGAHVGEAVLLVLGIGFALATNNMLVQYGL ARVPANRASIIMLFEIVVTALTAWLFAGEVPGPREWAGGACIVLASALSSWVHRAKPGEAAGAEGSGNRQDNPDGNLDQD RDGARKNRPRAMV >Mature_333_residues MNLSLRNTWPTLAIMMGASVWGMVWYPLRMLNALGLTGTAASALTSGAGCLFVLLVRRSAIRTVRWHWLLPALALFAGIT NLGFVWGAIHGQVMRVLLLFYLTPAWTALFAHFILRERLTWSGAALAAMSLAGAMMMLWSPQLGLPVPGSLAEWAGLAAG MSFAMSNVLILKTSRDLPDMRAEMRTAVIFGGAAIFGACASYFESMPAAPTGAHVGEAVLLVLGIGFALATNNMLVQYGL ARVPANRASIIMLFEIVVTALTAWLFAGEVPGPREWAGGACIVLASALSSWVHRAKPGEAAGAEGSGNRQDNPDGNLDQD RDGARKNRPRAMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35481; Mature: 35481
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSLRNTWPTLAIMMGASVWGMVWYPLRMLNALGLTGTAASALTSGAGCLFVLLVRRSA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHH IRTVRWHWLLPALALFAGITNLGFVWGAIHGQVMRVLLLFYLTPAWTALFAHFILRERLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC WSGAALAAMSLAGAMMMLWSPQLGLPVPGSLAEWAGLAAGMSFAMSNVLILKTSRDLPDM CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHH RAEMRTAVIFGGAAIFGACASYFESMPAAPTGAHVGEAVLLVLGIGFALATNNMLVQYGL HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH ARVPANRASIIMLFEIVVTALTAWLFAGEVPGPREWAGGACIVLASALSSWVHRAKPGEA HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCC AGAEGSGNRQDNPDGNLDQDRDGARKNRPRAMV CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure MNLSLRNTWPTLAIMMGASVWGMVWYPLRMLNALGLTGTAASALTSGAGCLFVLLVRRSA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHH IRTVRWHWLLPALALFAGITNLGFVWGAIHGQVMRVLLLFYLTPAWTALFAHFILRERLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC WSGAALAAMSLAGAMMMLWSPQLGLPVPGSLAEWAGLAAGMSFAMSNVLILKTSRDLPDM CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHH RAEMRTAVIFGGAAIFGACASYFESMPAAPTGAHVGEAVLLVLGIGFALATNNMLVQYGL HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH ARVPANRASIIMLFEIVVTALTAWLFAGEVPGPREWAGGACIVLASALSSWVHRAKPGEA HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCC AGAEGSGNRQDNPDGNLDQDRDGARKNRPRAMV CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA