| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yhdN [H]
Identifier: 186476064
GI number: 186476064
Start: 1464672
End: 1465073
Strand: Reverse
Name: yhdN [H]
Synonym: Bphy_1306
Alternate gene names: 186476064
Gene position: 1465073-1464672 (Counterclockwise)
Preceding gene: 186476070
Following gene: 186476063
Centisome position: 42.11
GC content: 67.66
Gene sequence:
>402_bases ATGAAATTGCTTGATGCACTTGTCGAACAACGGATCGCCGCCGCCGCCGCGCGTGGCGAGTTCGACTATTTGCCGGGAGC CGGCGCGCCGCAGGTTCTCGATGACGACGCACTCGTGCCCGAGGAAGTTCGAGTCGCGAACCGCATTCTGAAGAATGCGG GTTTCGTGCCGCCTGCCGTCGAGCAGTTGCGGGCGCTGCGCGACCTGCAGGGCGATCTCGATGCCGTCAGCGACGGCAGC ACGCGCTGCCGCCTGCAGGCGAAGATGCTTGCGCTCGATATGGCACTGGAATCGCTGCGCGGCGGGCCGCTGGTCATGCC GCGCGAATACTGCCGACGGATTGCGGAGCGCCTGTCGGAGCGCGCCGCCGACGAACCGGCGCCAAACGCGGGGCCGGCGT GA
Upstream 100 bases:
>100_bases TACGACAAATCCTAATCTGGGATGTGTCCTCTAGGCGTCTGACAAATCCATTTCGCAGCACCCTGATAAAATGGCGAAGC CGCAACGTAGTGGATTGCAG
Downstream 100 bases:
>100_bases GCATTGGCGTCGGTCCGGCCGGGCTGCCGTCCGCGGATTCTGTTTCGTCTGGCGACTTGTCTGCCGATACCGTCGGGCCC TGCCTGACGACGGCCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MKLLDALVEQRIAAAAARGEFDYLPGAGAPQVLDDDALVPEEVRVANRILKNAGFVPPAVEQLRALRDLQGDLDAVSDGS TRCRLQAKMLALDMALESLRGGPLVMPREYCRRIAERLSERAADEPAPNAGPA
Sequences:
>Translated_133_residues MKLLDALVEQRIAAAAARGEFDYLPGAGAPQVLDDDALVPEEVRVANRILKNAGFVPPAVEQLRALRDLQGDLDAVSDGS TRCRLQAKMLALDMALESLRGGPLVMPREYCRRIAERLSERAADEPAPNAGPA >Mature_133_residues MKLLDALVEQRIAAAAARGEFDYLPGAGAPQVLDDDALVPEEVRVANRILKNAGFVPPAVEQLRALRDLQGDLDAVSDGS TRCRLQAKMLALDMALESLRGGPLVMPREYCRRIAERLSERAADEPAPNAGPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789688, Length=64, Percent_Identity=56.25, Blast_Score=74, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018961 [H]
Pfam domain/function: PF09350 DUF1992 [H]
EC number: NA
Molecular weight: Translated: 14319; Mature: 14319
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLDALVEQRIAAAAARGEFDYLPGAGAPQVLDDDALVPEEVRVANRILKNAGFVPPAV CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH EQLRALRDLQGDLDAVSDGSTRCRLQAKMLALDMALESLRGGPLVMPREYCRRIAERLSE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH RAADEPAPNAGPA HHCCCCCCCCCCC >Mature Secondary Structure MKLLDALVEQRIAAAAARGEFDYLPGAGAPQVLDDDALVPEEVRVANRILKNAGFVPPAV CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH EQLRALRDLQGDLDAVSDGSTRCRLQAKMLALDMALESLRGGPLVMPREYCRRIAERLSE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH RAADEPAPNAGPA HHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8063098; 9278503 [H]