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The map label for this gene is ydjC [C]

Identifier: 186475943

GI number: 186475943

Start: 1325342

End: 1326193

Strand: Reverse

Name: ydjC [C]

Synonym: Bphy_1178

Alternate gene names: 186475943

Gene position: 1326193-1325342 (Counterclockwise)

Preceding gene: 186475944

Following gene: 186475942

Centisome position: 38.12

GC content: 65.96

Gene sequence:

>852_bases
ATGACGCAACGTGCGACGCATACGCCGCGACGCGCACTGATCGTTACCGCCGACGACTTCGGCCTGCATCCGCGCATCAA
CGAAGCGGTCGAGCGCGCGCATCTGCACGGCATCCTGACTTCAGCGAGCCTGATGGTGGCCGCGGCTGCGTCGGCGGATG
CCGTGCATCGCGCACGTCAGTATCCGAGCCTGCGCGTCGGCTTGCACATCGTGCTGGCCGACGGCGTGCCGATGCTGGCG
ACGCATCTCATTCCCGCGCTCGTCGACGGGCATGGCCGGCTCGGCGACCGGATGGTGCGCGACGGCTTTCGCTTTTTCCT
GCTGCCCGAAGTGCGCCGCCAGCTGAAGGCGGAGATCCGCGCGCAGTTTCAGGCGTTCGCGCGCACGGGTCTGAAGCTCG
ATCACGTCAACACGCACAAGCACTTCCATTTGCATCCGACCGTGCTCGCGCTGATCATCGAAGTGGGCAGCGAATATGGC
CTGAATGCGATGCGCCTGCCGTACGAGCGCGGCGCGCCGGCATGGATCCGGCCGTGGATCGCGCGCGTTCGCAAGCAGCT
GGATAATGCAGGGATCGCGCACAACGATTACATCATTGGCATGTCGCAGACGGGACACATGGACGAAGCGGCGCTGCTTG
CCGCGCTCGCACGGCTGCCCGAAGGCGTCGGCGAGATTTACTGCCATCCGGCCGTGCCGGGCGAAGGGCCGATTACGCCC
ACGATGCAAACGTACCGGCATAGCGACGAATTCGATGCGCTGATGTCCGAGCGCGTCGCGGCGGCGCTGGCGGCGAGCGG
CGCGATCACGGGCGGTTTCGCGGATGTGTTCGCGCAACGCGCATACATGTGA

Upstream 100 bases:

>100_bases
TCTGGGAAATCGTGCGCGAGATGCTGGTGAGCTGGGAGATGATGAAACGGCGTCTGCGCGAAGGCGTCGAATTCTTCCGC
TTCCTGCGGGCTCACGAGGC

Downstream 100 bases:

>100_bases
GGGACGCAGCTTTTTTTACCGATGATGAAGTGGCTCAAATGGTTGGGATTGCCCGCCGGCATCGCGGTGCTGATCGCGCT
CGCGTTGCACAGCGGTATGA

Product: hopanoid biosynthesis associated protein HpnK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MTQRATHTPRRALIVTADDFGLHPRINEAVERAHLHGILTSASLMVAAAASADAVHRARQYPSLRVGLHIVLADGVPMLA
THLIPALVDGHGRLGDRMVRDGFRFFLLPEVRRQLKAEIRAQFQAFARTGLKLDHVNTHKHFHLHPTVLALIIEVGSEYG
LNAMRLPYERGAPAWIRPWIARVRKQLDNAGIAHNDYIIGMSQTGHMDEAALLAALARLPEGVGEIYCHPAVPGEGPITP
TMQTYRHSDEFDALMSERVAAALAASGAITGGFADVFAQRAYM

Sequences:

>Translated_283_residues
MTQRATHTPRRALIVTADDFGLHPRINEAVERAHLHGILTSASLMVAAAASADAVHRARQYPSLRVGLHIVLADGVPMLA
THLIPALVDGHGRLGDRMVRDGFRFFLLPEVRRQLKAEIRAQFQAFARTGLKLDHVNTHKHFHLHPTVLALIIEVGSEYG
LNAMRLPYERGAPAWIRPWIARVRKQLDNAGIAHNDYIIGMSQTGHMDEAALLAALARLPEGVGEIYCHPAVPGEGPITP
TMQTYRHSDEFDALMSERVAAALAASGAITGGFADVFAQRAYM
>Mature_282_residues
TQRATHTPRRALIVTADDFGLHPRINEAVERAHLHGILTSASLMVAAAASADAVHRARQYPSLRVGLHIVLADGVPMLAT
HLIPALVDGHGRLGDRMVRDGFRFFLLPEVRRQLKAEIRAQFQAFARTGLKLDHVNTHKHFHLHPTVLALIIEVGSEYGL
NAMRLPYERGAPAWIRPWIARVRKQLDNAGIAHNDYIIGMSQTGHMDEAALLAALARLPEGVGEIYCHPAVPGEGPITPT
MQTYRHSDEFDALMSERVAAALAASGAITGGFADVFAQRAYM

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family [H]

Homologues:

Organism=Homo sapiens, GI63054868, Length=308, Percent_Identity=30.8441558441558, Blast_Score=100, Evalue=2e-21,
Organism=Escherichia coli, GI1788028, Length=272, Percent_Identity=27.9411764705882, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948 [H]

Pfam domain/function: PF04794 YdjC [H]

EC number: NA

Molecular weight: Translated: 31026; Mature: 30895

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRATHTPRRALIVTADDFGLHPRINEAVERAHLHGILTSASLMVAAAASADAVHRARQ
CCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPSLRVGLHIVLADGVPMLATHLIPALVDGHGRLGDRMVRDGFRFFLLPEVRRQLKAEIR
CCCEEEEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEECHHHHHHHHHHHH
AQFQAFARTGLKLDHVNTHKHFHLHPTVLALIIEVGSEYGLNAMRLPYERGAPAWIRPWI
HHHHHHHHCCCEEEECCCCCEEEECHHHHHHHHHHCCCCCCCEEECCHHCCCCHHHHHHH
ARVRKQLDNAGIAHNDYIIGMSQTGHMDEAALLAALARLPEGVGEIYCHPAVPGEGPITP
HHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCC
TMQTYRHSDEFDALMSERVAAALAASGAITGGFADVFAQRAYM
CHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TQRATHTPRRALIVTADDFGLHPRINEAVERAHLHGILTSASLMVAAAASADAVHRARQ
CCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPSLRVGLHIVLADGVPMLATHLIPALVDGHGRLGDRMVRDGFRFFLLPEVRRQLKAEIR
CCCEEEEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEECHHHHHHHHHHHH
AQFQAFARTGLKLDHVNTHKHFHLHPTVLALIIEVGSEYGLNAMRLPYERGAPAWIRPWI
HHHHHHHHCCCEEEECCCCCEEEECHHHHHHHHHHCCCCCCCEEECCHHCCCCHHHHHHH
ARVRKQLDNAGIAHNDYIIGMSQTGHMDEAALLAALARLPEGVGEIYCHPAVPGEGPITP
HHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCC
TMQTYRHSDEFDALMSERVAAALAASGAITGGFADVFAQRAYM
CHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA