Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186475942

Identifier: 186475942

GI number: 186475942

Start: 1324265

End: 1325320

Strand: Reverse

Name: 186475942

Synonym: Bphy_1177

Alternate gene names: NA

Gene position: 1325320-1324265 (Counterclockwise)

Preceding gene: 186475943

Following gene: 186475941

Centisome position: 38.09

GC content: 67.99

Gene sequence:

>1056_bases
ATGATGAAGTGGCTCAAATGGTTGGGATTGCCCGCCGGCATCGCGGTGCTGATCGCGCTCGCGTTGCACAGCGGTATGAG
CGACGTGCTGCATGCGATCGGCGCAGCGGGCTTCGCGCTGCTATGGCTCGTGCCGCTGCACGCATTGCCGTTGCTGCTCG
ACGCGCAGGCGTGGTGGCTGCTGATCGGCAAGCGCGCGTCACTGCCGTATCTGTGGTGGGTCGCGACGGTGCGCGAAGCC
GTTAGCCGGCTACTGCCCGTGGCGAGCATCGGCGGCGAGTTTGTCGGTGTGCGGCTCGCGCGGTGGAAGATCGACGAAAC
AAGCGTGGTCGGCGCGTCGGTGATCGTCGAGGTGCTGGTGACGATGGCCGTTCAGTATGCATTCGCGGCGCTGGGGCTTG
TGATGATCGTCGCGCAGACGGGGCATGACGACCTGCTCGTGACGATCGGCGCGGCACTGTTGCTGTCGTTGCCGCTGCCG
GTCGTGGCGTTTGTGCTGCTGCGGCGCGGCGGGCTTTTTCACGCGATCGAACGCTGGTCCGCGCGTCTGCCGATGAGCGC
GCACTGGGGCCTCGAGCGCCTCGGCGGCGCGCAGCTCGACGCCGCCATCGATACGCTGCTGAGCGAGCCTCTTCTGTTGC
TGCGCGCGTTCGTCTGGCAGTTCGCCGGTTATCTGCTTGGCGCGTCGGAGGTGTACCTGGCGCTGTGGATGTTGGGGCAT
CCCGTGTCGATCGGCGGCGCGATCGCCGTCGAGGCGCTCACGCAGGCGGCGCGTCATGCCGCGTTCTTCGTGCCGTCGGG
GCTGGGCGTGCAGGAAGCCGTCGTCGTGCTGCTCGCGCGTATGTTCGGCGTCGACGAGCAGACGGCGCTGTCCCTGGCAC
TCGTCAAGCGGATGCGCGAAGTCGTGTTCGGCTGTTTGTCGCTCGTCTCGTGGCAAGCGGCCGAGATCTTGCGCAACCGG
CGCGACGCGTGGCAACAGAAAGCCGTGCTCAGGCCCGCCGAACAGCGCGTCGCGCGGCAGCGTGCCGACACCGGCGACGG
CCGTCGCTCGCGCTGA

Upstream 100 bases:

>100_bases
CGTCGCGGCGGCGCTGGCGGCGAGCGGCGCGATCACGGGCGGTTTCGCGGATGTGTTCGCGCAACGCGCATACATGTGAG
GGACGCAGCTTTTTTTACCG

Downstream 100 bases:

>100_bases
TGCACGGCCGTGCGCGCATGACGTGACACGCAGCATTACCGAATGCGGCGTTGCAGGGCGTATGCGCCGAATGCGCGGCG
CGCGCTCATCCGCCGAGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MMKWLKWLGLPAGIAVLIALALHSGMSDVLHAIGAAGFALLWLVPLHALPLLLDAQAWWLLIGKRASLPYLWWVATVREA
VSRLLPVASIGGEFVGVRLARWKIDETSVVGASVIVEVLVTMAVQYAFAALGLVMIVAQTGHDDLLVTIGAALLLSLPLP
VVAFVLLRRGGLFHAIERWSARLPMSAHWGLERLGGAQLDAAIDTLLSEPLLLLRAFVWQFAGYLLGASEVYLALWMLGH
PVSIGGAIAVEALTQAARHAAFFVPSGLGVQEAVVVLLARMFGVDEQTALSLALVKRMREVVFGCLSLVSWQAAEILRNR
RDAWQQKAVLRPAEQRVARQRADTGDGRRSR

Sequences:

>Translated_351_residues
MMKWLKWLGLPAGIAVLIALALHSGMSDVLHAIGAAGFALLWLVPLHALPLLLDAQAWWLLIGKRASLPYLWWVATVREA
VSRLLPVASIGGEFVGVRLARWKIDETSVVGASVIVEVLVTMAVQYAFAALGLVMIVAQTGHDDLLVTIGAALLLSLPLP
VVAFVLLRRGGLFHAIERWSARLPMSAHWGLERLGGAQLDAAIDTLLSEPLLLLRAFVWQFAGYLLGASEVYLALWMLGH
PVSIGGAIAVEALTQAARHAAFFVPSGLGVQEAVVVLLARMFGVDEQTALSLALVKRMREVVFGCLSLVSWQAAEILRNR
RDAWQQKAVLRPAEQRVARQRADTGDGRRSR
>Mature_351_residues
MMKWLKWLGLPAGIAVLIALALHSGMSDVLHAIGAAGFALLWLVPLHALPLLLDAQAWWLLIGKRASLPYLWWVATVREA
VSRLLPVASIGGEFVGVRLARWKIDETSVVGASVIVEVLVTMAVQYAFAALGLVMIVAQTGHDDLLVTIGAALLLSLPLP
VVAFVLLRRGGLFHAIERWSARLPMSAHWGLERLGGAQLDAAIDTLLSEPLLLLRAFVWQFAGYLLGASEVYLALWMLGH
PVSIGGAIAVEALTQAARHAAFFVPSGLGVQEAVVVLLARMFGVDEQTALSLALVKRMREVVFGCLSLVSWQAAEILRNR
RDAWQQKAVLRPAEQRVARQRADTGDGRRSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38124; Mature: 38124

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKWLKWLGLPAGIAVLIALALHSGMSDVLHAIGAAGFALLWLVPLHALPLLLDAQAWWL
CCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LIGKRASLPYLWWVATVREAVSRLLPVASIGGEFVGVRLARWKIDETSVVGASVIVEVLV
HEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCHHHHHHHHHHHHHH
TMAVQYAFAALGLVMIVAQTGHDDLLVTIGAALLLSLPLPVVAFVLLRRGGLFHAIERWS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHH
ARLPMSAHWGLERLGGAQLDAAIDTLLSEPLLLLRAFVWQFAGYLLGASEVYLALWMLGH
HCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
PVSIGGAIAVEALTQAARHAAFFVPSGLGVQEAVVVLLARMFGVDEQTALSLALVKRMRE
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VVFGCLSLVSWQAAEILRNRRDAWQQKAVLRPAEQRVARQRADTGDGRRSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MMKWLKWLGLPAGIAVLIALALHSGMSDVLHAIGAAGFALLWLVPLHALPLLLDAQAWWL
CCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LIGKRASLPYLWWVATVREAVSRLLPVASIGGEFVGVRLARWKIDETSVVGASVIVEVLV
HEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCHHHHHHHHHHHHHH
TMAVQYAFAALGLVMIVAQTGHDDLLVTIGAALLLSLPLPVVAFVLLRRGGLFHAIERWS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHH
ARLPMSAHWGLERLGGAQLDAAIDTLLSEPLLLLRAFVWQFAGYLLGASEVYLALWMLGH
HCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
PVSIGGAIAVEALTQAARHAAFFVPSGLGVQEAVVVLLARMFGVDEQTALSLALVKRMRE
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VVFGCLSLVSWQAAEILRNRRDAWQQKAVLRPAEQRVARQRADTGDGRRSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA