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The map label for this gene is 186475922

Identifier: 186475922

GI number: 186475922

Start: 1296503

End: 1297642

Strand: Reverse

Name: 186475922

Synonym: Bphy_1157

Alternate gene names: NA

Gene position: 1297642-1296503 (Counterclockwise)

Preceding gene: 186475923

Following gene: 186475921

Centisome position: 37.3

GC content: 63.6

Gene sequence:

>1140_bases
ATGAAAAAGCTCATACTCTCGACCCTCTCGCTCACGCTGTTCGCCACGGCTGGCGCAGCACACGCTCAGAACTCGGTGAC
GCTGTACGGCCTGCTCGATACGGGCCTGACGTACACCAGCAACGCCGGCGGCCACAGCAATATCCAGCAGGCAAGCGGCA
TCCTGAACGGCAACCGTTGGGGCCTGCGCGGCTCGGAAGATCTCGGCAACGGGCTAAAGGCGATCTTCACGTTGGAAAGC
GGCTTTAATCTGTCGACGGGCGCAATGGGGCAGAACAGCCGTCTGTTCGGCCGCCAGGCATTCGTCGGCCTGGCCAGCAA
CCAGTACGGCGCGGTGACGCTCGGCCGCCAGTACGACAACCTCGTCGACAACCTCGGCCCGCTGTCGCTGAACGGCACGC
AATACGGCGGCACGCTCGCTGCGCACCCGTACGACAACGACAACCTGAACAACTCGTTCCGCGTCAGCAACTCGGTCAAG
TATCAGAGCGTCGATTACGCCGGCTTCAAGGCGGGCGCGATGTACGGCTTCTCGAACGAAGCTGACGGCTTCTCGGACAA
CCGCGCGTATAGCGTCGGCGCATCGTATGCATTCGGCGGTCTGAAGGTCGCGGCAGCTTATCTGCAACTGAACGGCGCAG
GGTCGAACAACACGAGCGGCGCAGTGAGCACCGACGCAACCTTCACGGCTTCGCGTCAACGCACGTACGGCGCGGGCGTC
AGCTATGCGTTCGGCCCTGCAAACGTCGGTTTCGTCTTTACGCAGACGCAACTCGCGAACGGCACCACTATCGGCACGTC
GGCATCGGGCAAGACGAGCGGCATCGCGCTGAACGGCACGGGCGCGCACTTCACGAATTTCGAACTGAACGGCCGCTACG
CGATCACGCCGGCATGGTCTCTGTCGGGCGCCTACACGTACACCGATGCAAGCCTGCTCGGCGCACAGCCGAAGTACCAC
CAGGTCACGCTGCAAACCGACTACGCACTGTCCAGGCGCACCGACGTCTACGCTGAGGCGGCCTACCAGCACGTCGGCAG
CACGGGCAGCTCGGGCATCACGGCGCACATCGTCGGCGTCAGCGCATCGTCGAGCGACTCGCAAGTGGTCGGCACCGTCG
GTATCCGTCACCGCTTCTAG

Upstream 100 bases:

>100_bases
TTAAAGGGTGGCTAAAACGCAACGATAAAGGCGAAATACGGATTCAATCGGATATTCTCCGCGGCACGATAGCATTCGTT
ATCGGAATAATGGAGAAAAG

Downstream 100 bases:

>100_bases
GCGGCGAGAGCCGCACGCGATGCACGGCATGATGTGACATCGCGTGCGCATCTTGCGCACGCCGCAGCGGCGAACGCGCG
TTCCGTGTCCAGGCGGAGCG

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKKLILSTLSLTLFATAGAAHAQNSVTLYGLLDTGLTYTSNAGGHSNIQQASGILNGNRWGLRGSEDLGNGLKAIFTLES
GFNLSTGAMGQNSRLFGRQAFVGLASNQYGAVTLGRQYDNLVDNLGPLSLNGTQYGGTLAAHPYDNDNLNNSFRVSNSVK
YQSVDYAGFKAGAMYGFSNEADGFSDNRAYSVGASYAFGGLKVAAAYLQLNGAGSNNTSGAVSTDATFTASRQRTYGAGV
SYAFGPANVGFVFTQTQLANGTTIGTSASGKTSGIALNGTGAHFTNFELNGRYAITPAWSLSGAYTYTDASLLGAQPKYH
QVTLQTDYALSRRTDVYAEAAYQHVGSTGSSGITAHIVGVSASSSDSQVVGTVGIRHRF

Sequences:

>Translated_379_residues
MKKLILSTLSLTLFATAGAAHAQNSVTLYGLLDTGLTYTSNAGGHSNIQQASGILNGNRWGLRGSEDLGNGLKAIFTLES
GFNLSTGAMGQNSRLFGRQAFVGLASNQYGAVTLGRQYDNLVDNLGPLSLNGTQYGGTLAAHPYDNDNLNNSFRVSNSVK
YQSVDYAGFKAGAMYGFSNEADGFSDNRAYSVGASYAFGGLKVAAAYLQLNGAGSNNTSGAVSTDATFTASRQRTYGAGV
SYAFGPANVGFVFTQTQLANGTTIGTSASGKTSGIALNGTGAHFTNFELNGRYAITPAWSLSGAYTYTDASLLGAQPKYH
QVTLQTDYALSRRTDVYAEAAYQHVGSTGSSGITAHIVGVSASSSDSQVVGTVGIRHRF
>Mature_379_residues
MKKLILSTLSLTLFATAGAAHAQNSVTLYGLLDTGLTYTSNAGGHSNIQQASGILNGNRWGLRGSEDLGNGLKAIFTLES
GFNLSTGAMGQNSRLFGRQAFVGLASNQYGAVTLGRQYDNLVDNLGPLSLNGTQYGGTLAAHPYDNDNLNNSFRVSNSVK
YQSVDYAGFKAGAMYGFSNEADGFSDNRAYSVGASYAFGGLKVAAAYLQLNGAGSNNTSGAVSTDATFTASRQRTYGAGV
SYAFGPANVGFVFTQTQLANGTTIGTSASGKTSGIALNGTGAHFTNFELNGRYAITPAWSLSGAYTYTDASLLGAQPKYH
QVTLQTDYALSRRTDVYAEAAYQHVGSTGSSGITAHIVGVSASSSDSQVVGTVGIRHRF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39426; Mature: 39426

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLILSTLSLTLFATAGAAHAQNSVTLYGLLDTGLTYTSNAGGHSNIQQASGILNGNRW
CCHHHHHHHEEEEEEECCCCCCCCCEEEEEEECCCCEEECCCCCCCCHHHHHCCCCCCCC
GLRGSEDLGNGLKAIFTLESGFNLSTGAMGQNSRLFGRQAFVGLASNQYGAVTLGRQYDN
CCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCCEECCEEEEEECCCCCCEEEECCHHHH
LVDNLGPLSLNGTQYGGTLAAHPYDNDNLNNSFRVSNSVKYQSVDYAGFKAGAMYGFSNE
HHHCCCCEEECCCCCCCEEEECCCCCCCCCCEEEECCCEEEEECCCCCCCCCEEECCCCC
ADGFSDNRAYSVGASYAFGGLKVAAAYLQLNGAGSNNTSGAVSTDATFTASRQRTYGAGV
CCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCEEECCCEEEECCCEECCCCC
SYAFGPANVGFVFTQTQLANGTTIGTSASGKTSGIALNGTGAHFTNFELNGRYAITPAWS
EEEECCCCCCEEEEEEEECCCCEECCCCCCCCCCEEEECCCCEEEEEEECCEEEEEECCC
LSGAYTYTDASLLGAQPKYHQVTLQTDYALSRRTDVYAEAAYQHVGSTGSSGITAHIVGV
CCCEEEEECHHHHCCCCCEEEEEEEECCCHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEE
SASSSDSQVVGTVGIRHRF
ECCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MKKLILSTLSLTLFATAGAAHAQNSVTLYGLLDTGLTYTSNAGGHSNIQQASGILNGNRW
CCHHHHHHHEEEEEEECCCCCCCCCEEEEEEECCCCEEECCCCCCCCHHHHHCCCCCCCC
GLRGSEDLGNGLKAIFTLESGFNLSTGAMGQNSRLFGRQAFVGLASNQYGAVTLGRQYDN
CCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCCEECCEEEEEECCCCCCEEEECCHHHH
LVDNLGPLSLNGTQYGGTLAAHPYDNDNLNNSFRVSNSVKYQSVDYAGFKAGAMYGFSNE
HHHCCCCEEECCCCCCCEEEECCCCCCCCCCEEEECCCEEEEECCCCCCCCCEEECCCCC
ADGFSDNRAYSVGASYAFGGLKVAAAYLQLNGAGSNNTSGAVSTDATFTASRQRTYGAGV
CCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCEEECCCEEEECCCEECCCCC
SYAFGPANVGFVFTQTQLANGTTIGTSASGKTSGIALNGTGAHFTNFELNGRYAITPAWS
EEEECCCCCCEEEEEEEECCCCEECCCCCCCCCCEEEECCCCEEEEEEECCEEEEEECCC
LSGAYTYTDASLLGAQPKYHQVTLQTDYALSRRTDVYAEAAYQHVGSTGSSGITAHIVGV
CCCEEEEECHHHHCCCCCEEEEEEEECCCHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEE
SASSSDSQVVGTVGIRHRF
ECCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]