| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yceG [C]
Identifier: 186475807
GI number: 186475807
Start: 1171552
End: 1172562
Strand: Direct
Name: yceG [C]
Synonym: Bphy_1042
Alternate gene names: 186475807
Gene position: 1171552-1172562 (Clockwise)
Preceding gene: 186475804
Following gene: 186475808
Centisome position: 33.67
GC content: 64.29
Gene sequence:
>1011_bases ATGTCCCTCCTGAAGAAATGTCTCATCGCCTGCGTCCTGCTCGCGATGCTGATCGGTGCCGCGGCATACGGCGCATACCG CTGGGCTACGACACCCGTCCAACTCGCCACACCGCAACTCGACGTCACGATCAAGCCGCATAGCAGTCTGCGCAGCGTCA CGACGCAGCTCAATCGCGGCGGCGTACCCGTCGAGCCCGAACTGTTCGTGCTCATGACGCGCGTGCTCGGCCTCCAGACG GCGCTCAAATCGGGCAACTACGAGTTCAAGCAAGGCATCACGCCGTACGACGTGCTGCAAAAGATCGCGCGCGGCGACGT GAACGAATACGTGGCCACCATCATCGAGGGCTGGACGTTCAAGCATATGCGCGCCGAACTGGATGCCAACCCGGCTTTGA AGCACGACACGGCGGGCATGGCGGACGCGGATCTCCTGAAGGCGATCGGCGCCCCCGAAACGCCGACGGGCACGGGCGAG GGGCTGTTCTTCCCCGACACCTATCTGTTCGACAAGGACACGAGCGACCTCGACGTCTATCGCCGCGCGTACCGGCTGAT GAAGCTGCGCATCGACGAAGCGTGGGCGGCGCGTGCGCCCGGTCTGCCGTACAAGACGCCGTACGACGCGCTGACGATGG CGTCGATCGTCGAAAAGGAAACGGGCAAGGCGTCCGACCGCGCGATGGTCGCGGGCGTGTTCGCCAACCGTCTGCGCGCG GGCATGCCGCTGCAGACGGACCCGACCGTCATCTACGGAATGGGCGACAGCTACACGGGGCATCTGCGCAAGAAGGACCT GCAGACGGACACTCCCTACAATACCTATATGCGAATGGGCCTGCCGCCTTCGCCGATTGCGCTGCCCGGCGTCGCATCGC TGCAGGCCGCGCTCAATCCGGCGCCGACCAGCGCGCTGTATTTCGTGTCGCGCGGCGACGGCAGCAGCATCTTTTCTGAC ACGCTCGGCGATCACAACAAGGCCGTCGACAAGTACATTCGAGGGCAATGA
Upstream 100 bases:
>100_bases GCAGAAGCAAGCGGTGCGTTCATGGATTCGGGGAACAGTCAATTCTGACTTTGGCGGAGGCAAGCAAGTATTATATTGGC TTCACTCGAACCACGTTTCC
Downstream 100 bases:
>100_bases TGGCGCGGGGAAAATTCATCACGTTCGAGGGCATCGACGGTGCGGGCAAGACCACGCATCTCGGCTGGTTTCGCGACCGT CTGGAGCAGAAGGTCGCGCC
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSLLKKCLIACVLLAMLIGAAAYGAYRWATTPVQLATPQLDVTIKPHSSLRSVTTQLNRGGVPVEPELFVLMTRVLGLQT ALKSGNYEFKQGITPYDVLQKIARGDVNEYVATIIEGWTFKHMRAELDANPALKHDTAGMADADLLKAIGAPETPTGTGE GLFFPDTYLFDKDTSDLDVYRRAYRLMKLRIDEAWAARAPGLPYKTPYDALTMASIVEKETGKASDRAMVAGVFANRLRA GMPLQTDPTVIYGMGDSYTGHLRKKDLQTDTPYNTYMRMGLPPSPIALPGVASLQAALNPAPTSALYFVSRGDGSSIFSD TLGDHNKAVDKYIRGQ
Sequences:
>Translated_336_residues MSLLKKCLIACVLLAMLIGAAAYGAYRWATTPVQLATPQLDVTIKPHSSLRSVTTQLNRGGVPVEPELFVLMTRVLGLQT ALKSGNYEFKQGITPYDVLQKIARGDVNEYVATIIEGWTFKHMRAELDANPALKHDTAGMADADLLKAIGAPETPTGTGE GLFFPDTYLFDKDTSDLDVYRRAYRLMKLRIDEAWAARAPGLPYKTPYDALTMASIVEKETGKASDRAMVAGVFANRLRA GMPLQTDPTVIYGMGDSYTGHLRKKDLQTDTPYNTYMRMGLPPSPIALPGVASLQAALNPAPTSALYFVSRGDGSSIFSD TLGDHNKAVDKYIRGQ >Mature_335_residues SLLKKCLIACVLLAMLIGAAAYGAYRWATTPVQLATPQLDVTIKPHSSLRSVTTQLNRGGVPVEPELFVLMTRVLGLQTA LKSGNYEFKQGITPYDVLQKIARGDVNEYVATIIEGWTFKHMRAELDANPALKHDTAGMADADLLKAIGAPETPTGTGEG LFFPDTYLFDKDTSDLDVYRRAYRLMKLRIDEAWAARAPGLPYKTPYDALTMASIVEKETGKASDRAMVAGVFANRLRAG MPLQTDPTVIYGMGDSYTGHLRKKDLQTDTPYNTYMRMGLPPSPIALPGVASLQAALNPAPTSALYFVSRGDGSSIFSDT LGDHNKAVDKYIRGQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=292, Percent_Identity=40.7534246575342, Blast_Score=216, Evalue=2e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 36616; Mature: 36484
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLKKCLIACVLLAMLIGAAAYGAYRWATTPVQLATPQLDVTIKPHSSLRSVTTQLNRG CHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEECCCEEEEECCHHHHHHHHHHHHCC GVPVEPELFVLMTRVLGLQTALKSGNYEFKQGITPYDVLQKIARGDVNEYVATIIEGWTF CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCHH KHMRAELDANPALKHDTAGMADADLLKAIGAPETPTGTGEGLFFPDTYLFDKDTSDLDVY HHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEECCCCEEECCCCCHHHHH RRAYRLMKLRIDEAWAARAPGLPYKTPYDALTMASIVEKETGKASDRAMVAGVFANRLRA HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC GMPLQTDPTVIYGMGDSYTGHLRKKDLQTDTPYNTYMRMGLPPSPIALPGVASLQAALNP CCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCHHHEEECCCCCCCCCCCCHHHHHHHCCC APTSALYFVSRGDGSSIFSDTLGDHNKAVDKYIRGQ CCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure SLLKKCLIACVLLAMLIGAAAYGAYRWATTPVQLATPQLDVTIKPHSSLRSVTTQLNRG HHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEECCCEEEEECCHHHHHHHHHHHHCC GVPVEPELFVLMTRVLGLQTALKSGNYEFKQGITPYDVLQKIARGDVNEYVATIIEGWTF CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCHH KHMRAELDANPALKHDTAGMADADLLKAIGAPETPTGTGEGLFFPDTYLFDKDTSDLDVY HHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEECCCCEEECCCCCHHHHH RRAYRLMKLRIDEAWAARAPGLPYKTPYDALTMASIVEKETGKASDRAMVAGVFANRLRA HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC GMPLQTDPTVIYGMGDSYTGHLRKKDLQTDTPYNTYMRMGLPPSPIALPGVASLQAALNP CCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCHHHEEECCCCCCCCCCCCHHHHHHHCCC APTSALYFVSRGDGSSIFSDTLGDHNKAVDKYIRGQ CCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]