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The map label for this gene is yfbE [C]

Identifier: 186475691

GI number: 186475691

Start: 1028153

End: 1029304

Strand: Reverse

Name: yfbE [C]

Synonym: Bphy_0926

Alternate gene names: 186475691

Gene position: 1029304-1028153 (Counterclockwise)

Preceding gene: 186475692

Following gene: 186475690

Centisome position: 29.58

GC content: 63.02

Gene sequence:

>1152_bases
ATGACCCAGTCATCCGTTCCGTTTTTGCCGTTCGTGCGTCCCGAGATCGATGAAGAAACGATCAGCGGTGTAGTCGACGT
GCTCCGCTCCGGCTGGATTACGACGGGCCCGCAGAATCAGGCGTTTGAAAAGGCATTGTCGGCGTACTGCGGCGGCCGCC
CGGTGCGCACGTTCAATTCGGGCACGGCGACGCTGGAAATCGGTCTGCGCATCGCGGGCGTCGGCGCTGGCGACGAAGTC
ATCACGACGCCCGCGTCGTGGGTCGCGACCAGCAACGTGATCCTCGCAGTGGGCGCAACACCCGTGTTCGTCGATATCGA
CCCGGTCACGCGCAACATCGATCTGGATCTGATGGAAAAGGCGATCACGCCGCGGACCAAAGCGATCATCCCCGTGTTCC
TGTCCGGCCTGCCCGTCGACATGGACCGGCTCTACGCGATCGCCCGCGCGCACAAGCTGCGCGTGATCGAAGACGCCGCG
CAGGCCTTCGGCGCAACGTGGAACGGCGAGCGCATCGGCAAGCTGGGCGACCTCGTGTCGTTCAGCTTTCACGCGAACAA
GAACCTGACCTCGATCGAAGGCGGCGCACTGGTGCTGAACAACGAAGAGGAAGCCGTCCTGGCGCAGAAGTACCGGCTGC
AGGGCATCACGCGCACGGGCTTCGACGGCATGGATTGCGACCTGCTCGGCGGCAAGTACAACCTGACGGACGTCGCAGCA
CGTGTCGGCCTGGGTCAGTTACAGCATATCGAGCGCTTTCGCACGCAGCGCCACAAGCTGGCGCGCGCATACTTCGCTGG
GTTCGACGGCGGCGCGGCCGTCCGGCTCGGCATGGGCCTGCCGCTGGCGGACTTCGAAAACACCAACTGGCATATGTTCC
TCGTTACGCTGCCGCTCGCGCGTCTGTCGATCACGCGCGCCGGCTTCATGGAGCAGATGAAGGAGCGCGGCATCGGCACG
GGCACGCACTATCCGGCCATCCATTTGTTCTCGCTGTATCGCGCAATGGGGTACAAGGAAGGCATGTATCCGCATGCGGA
GCACTACGGCGCAACCACACTTACACTGCCGCTCTTCACGCTGATGAATGAAGGCGATGTCGAGCGCGTGTGCCGCGCCG
TCAACGAGATTTGCGAACAATACGGTCAATAA

Upstream 100 bases:

>100_bases
CAATCAACGCTGGCGAAACGATAGAGCTTGACTAAAGCCGGATATTACAACTTTGTTAGGCTCCGCGGCCGCGACCCTTT
TATATCGAGCGTATTCACTC

Downstream 100 bases:

>100_bases
AGCGGAAATCCAGGGAATATGAATCAATCGGACCCACGCACGGTCGCTCCCGAACTGTCGGTCGTCATCCCCGTTTACAA
CGAGGAGCAAGGACTCGCCG

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MTQSSVPFLPFVRPEIDEETISGVVDVLRSGWITTGPQNQAFEKALSAYCGGRPVRTFNSGTATLEIGLRIAGVGAGDEV
ITTPASWVATSNVILAVGATPVFVDIDPVTRNIDLDLMEKAITPRTKAIIPVFLSGLPVDMDRLYAIARAHKLRVIEDAA
QAFGATWNGERIGKLGDLVSFSFHANKNLTSIEGGALVLNNEEEAVLAQKYRLQGITRTGFDGMDCDLLGGKYNLTDVAA
RVGLGQLQHIERFRTQRHKLARAYFAGFDGGAAVRLGMGLPLADFENTNWHMFLVTLPLARLSITRAGFMEQMKERGIGT
GTHYPAIHLFSLYRAMGYKEGMYPHAEHYGATTLTLPLFTLMNEGDVERVCRAVNEICEQYGQ

Sequences:

>Translated_383_residues
MTQSSVPFLPFVRPEIDEETISGVVDVLRSGWITTGPQNQAFEKALSAYCGGRPVRTFNSGTATLEIGLRIAGVGAGDEV
ITTPASWVATSNVILAVGATPVFVDIDPVTRNIDLDLMEKAITPRTKAIIPVFLSGLPVDMDRLYAIARAHKLRVIEDAA
QAFGATWNGERIGKLGDLVSFSFHANKNLTSIEGGALVLNNEEEAVLAQKYRLQGITRTGFDGMDCDLLGGKYNLTDVAA
RVGLGQLQHIERFRTQRHKLARAYFAGFDGGAAVRLGMGLPLADFENTNWHMFLVTLPLARLSITRAGFMEQMKERGIGT
GTHYPAIHLFSLYRAMGYKEGMYPHAEHYGATTLTLPLFTLMNEGDVERVCRAVNEICEQYGQ
>Mature_382_residues
TQSSVPFLPFVRPEIDEETISGVVDVLRSGWITTGPQNQAFEKALSAYCGGRPVRTFNSGTATLEIGLRIAGVGAGDEVI
TTPASWVATSNVILAVGATPVFVDIDPVTRNIDLDLMEKAITPRTKAIIPVFLSGLPVDMDRLYAIARAHKLRVIEDAAQ
AFGATWNGERIGKLGDLVSFSFHANKNLTSIEGGALVLNNEEEAVLAQKYRLQGITRTGFDGMDCDLLGGKYNLTDVAAR
VGLGQLQHIERFRTQRHKLARAYFAGFDGGAAVRLGMGLPLADFENTNWHMFLVTLPLARLSITRAGFMEQMKERGIGTG
THYPAIHLFSLYRAMGYKEGMYPHAEHYGATTLTLPLFTLMNEGDVERVCRAVNEICEQYGQ

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=384, Percent_Identity=39.84375, Blast_Score=245, Evalue=3e-66,
Organism=Escherichia coli, GI2367285, Length=360, Percent_Identity=31.1111111111111, Blast_Score=143, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41886; Mature: 41754

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSSVPFLPFVRPEIDEETISGVVDVLRSGWITTGPQNQAFEKALSAYCGGRPVRTFNS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECC
GTATLEIGLRIAGVGAGDEVITTPASWVATSNVILAVGATPVFVDIDPVTRNIDLDLMEK
CCEEEEEEEEEEECCCCCCEEECCHHHHCCCCEEEEECCCEEEEECCCCCCCCCHHHHHH
AITPRTKAIIPVFLSGLPVDMDRLYAIARAHKLRVIEDAAQAFGATWNGERIGKLGDLVS
HCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEE
FSFHANKNLTSIEGGALVLNNEEEAVLAQKYRLQGITRTGFDGMDCDLLGGKYNLTDVAA
EEEECCCCCCEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHH
RVGLGQLQHIERFRTQRHKLARAYFAGFDGGAAVRLGMGLPLADFENTNWHMFLVTLPLA
HHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECHH
RLSITRAGFMEQMKERGIGTGTHYPAIHLFSLYRAMGYKEGMYPHAEHYGATTLTLPLFT
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCEEHHHHHHH
LMNEGDVERVCRAVNEICEQYGQ
HHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQSSVPFLPFVRPEIDEETISGVVDVLRSGWITTGPQNQAFEKALSAYCGGRPVRTFNS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECC
GTATLEIGLRIAGVGAGDEVITTPASWVATSNVILAVGATPVFVDIDPVTRNIDLDLMEK
CCEEEEEEEEEEECCCCCCEEECCHHHHCCCCEEEEECCCEEEEECCCCCCCCCHHHHHH
AITPRTKAIIPVFLSGLPVDMDRLYAIARAHKLRVIEDAAQAFGATWNGERIGKLGDLVS
HCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEE
FSFHANKNLTSIEGGALVLNNEEEAVLAQKYRLQGITRTGFDGMDCDLLGGKYNLTDVAA
EEEECCCCCCEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHH
RVGLGQLQHIERFRTQRHKLARAYFAGFDGGAAVRLGMGLPLADFENTNWHMFLVTLPLA
HHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECHH
RLSITRAGFMEQMKERGIGTGTHYPAIHLFSLYRAMGYKEGMYPHAEHYGATTLTLPLFT
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCEEHHHHHHH
LMNEGDVERVCRAVNEICEQYGQ
HHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]