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The map label for this gene is arnC [H]

Identifier: 186475690

GI number: 186475690

Start: 1027085

End: 1028134

Strand: Reverse

Name: arnC [H]

Synonym: Bphy_0925

Alternate gene names: 186475690

Gene position: 1028134-1027085 (Counterclockwise)

Preceding gene: 186475691

Following gene: 186475689

Centisome position: 29.55

GC content: 63.9

Gene sequence:

>1050_bases
ATGAATCAATCGGACCCACGCACGGTCGCTCCCGAACTGTCGGTCGTCATCCCCGTTTACAACGAGGAGCAAGGACTCGC
CGCACTGTTCTCGCGCCTGTACCCCGCGCTCGATGCGCTCGGCACGAGCTACGAGGTAATCTTCATCAATGACGGCAGCC
GCGACCGGTCGCCCGCGATGCTCGCCGACCAGTTCCGCGCCCGTCCCGACACCACGCGGGTGATCCTGCTGAACGGCAAC
TACGGGCAGCACATGGCGATCCTCGCGGGCTTCGAGCAATCGCGCGGCCAGATCGTCATCACGCTCGACGCCGACCTGCA
GAATCCGCCCGAAGAAATCGGCAAGCTGTGCGCGAAAATGCGCGAGGGCTTCGACTATGTCGGCACGATCCGCATGCAGC
GCCGCGACAGCCTGTGGCGGCGCAAGGCGTCGCAGGCGATGAACCGCCTGCGCGAACGCATCACGCGCATCAAGATGACC
GACCAGGGCTGCATGCTGCGCGCCTACAGCCGGCACGTGATCGACACGATCAACCGCTGCGGCGAGGTCAACACGTTCAT
CCCCGCGCTCGCCTACACGTTCGCGCAAAATCCCGTCGAAATCGAGGTCGCGCACGAAGAGCGCTTCGCGGGCGAATCGA
AGTACTCCGTCTACAGCCTGATCCGCCTGAACTTCGACCTCGTCACGGGCTTCTCGGTCGTGCCGCTGCAATGGCTGTCG
TTCATCGGTGTGATCCTGTCGATGGGCTCGGCGGCCTTGTTCGTGCTGCTGCTCATCCGCCGCTTCATCATCGGCGCGGA
AGTGCAAGGTGTGTTCACGCTGTTCGCCATCACGTTCTTCATGCTCGGCGTGATCATCTTCGCGCTCGGCCTGCTCGGCG
AATACATCGGCCGCATCTATCAGCAGGTGCGTGCGCGTCCGCGCTATCTGGTGCAGACCATTCTCGAACAGCGCGACGGC
GAACCCGTTGTCGCGCAACCGCGCCAGTCGATCTTGCCGGGCATGCAGCCCGCACCCGTCGCACACGACGAACCGAGGCA
AGGCGCATGA

Upstream 100 bases:

>100_bases
GCTCTTCACGCTGATGAATGAAGGCGATGTCGAGCGCGTGTGCCGCGCCGTCAACGAGATTTGCGAACAATACGGTCAAT
AAAGCGGAAATCCAGGGAAT

Downstream 100 bases:

>100_bases
AGCCGCGCGCCGTCGTCTTCGCGTATCACAACGTCGGTGTGCGCTGCCTGCAGGTACTGCTCGCGCGCGGCGTCGAGGTC
GCGCTCGTCGTCACGCACGA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MNQSDPRTVAPELSVVIPVYNEEQGLAALFSRLYPALDALGTSYEVIFINDGSRDRSPAMLADQFRARPDTTRVILLNGN
YGQHMAILAGFEQSRGQIVITLDADLQNPPEEIGKLCAKMREGFDYVGTIRMQRRDSLWRRKASQAMNRLRERITRIKMT
DQGCMLRAYSRHVIDTINRCGEVNTFIPALAYTFAQNPVEIEVAHEERFAGESKYSVYSLIRLNFDLVTGFSVVPLQWLS
FIGVILSMGSAALFVLLLIRRFIIGAEVQGVFTLFAITFFMLGVIIFALGLLGEYIGRIYQQVRARPRYLVQTILEQRDG
EPVVAQPRQSILPGMQPAPVAHDEPRQGA

Sequences:

>Translated_349_residues
MNQSDPRTVAPELSVVIPVYNEEQGLAALFSRLYPALDALGTSYEVIFINDGSRDRSPAMLADQFRARPDTTRVILLNGN
YGQHMAILAGFEQSRGQIVITLDADLQNPPEEIGKLCAKMREGFDYVGTIRMQRRDSLWRRKASQAMNRLRERITRIKMT
DQGCMLRAYSRHVIDTINRCGEVNTFIPALAYTFAQNPVEIEVAHEERFAGESKYSVYSLIRLNFDLVTGFSVVPLQWLS
FIGVILSMGSAALFVLLLIRRFIIGAEVQGVFTLFAITFFMLGVIIFALGLLGEYIGRIYQQVRARPRYLVQTILEQRDG
EPVVAQPRQSILPGMQPAPVAHDEPRQGA
>Mature_349_residues
MNQSDPRTVAPELSVVIPVYNEEQGLAALFSRLYPALDALGTSYEVIFINDGSRDRSPAMLADQFRARPDTTRVILLNGN
YGQHMAILAGFEQSRGQIVITLDADLQNPPEEIGKLCAKMREGFDYVGTIRMQRRDSLWRRKASQAMNRLRERITRIKMT
DQGCMLRAYSRHVIDTINRCGEVNTFIPALAYTFAQNPVEIEVAHEERFAGESKYSVYSLIRLNFDLVTGFSVVPLQWLS
FIGVILSMGSAALFVLLLIRRFIIGAEVQGVFTLFAITFFMLGVIIFALGLLGEYIGRIYQQVRARPRYLVQTILEQRDG
EPVVAQPRQSILPGMQPAPVAHDEPRQGA

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=238, Percent_Identity=26.4705882352941, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1788588, Length=312, Percent_Identity=50.9615384615385, Blast_Score=312, Evalue=3e-86,
Organism=Escherichia coli, GI1788692, Length=304, Percent_Identity=27.9605263157895, Blast_Score=150, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6325441, Length=150, Percent_Identity=28, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 39290; Mature: 39290

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSDPRTVAPELSVVIPVYNEEQGLAALFSRLYPALDALGTSYEVIFINDGSRDRSPAM
CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHH
LADQFRARPDTTRVILLNGNYGQHMAILAGFEQSRGQIVITLDADLQNPPEEIGKLCAKM
HHHHHCCCCCCCEEEEEECCCCCHHHEEECHHCCCCEEEEEEECCCCCCHHHHHHHHHHH
REGFDYVGTIRMQRRDSLWRRKASQAMNRLRERITRIKMTDQGCMLRAYSRHVIDTINRC
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
GEVNTFIPALAYTFAQNPVEIEVAHEERFAGESKYSVYSLIRLNFDLVTGFSVVPLQWLS
CCHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
FIGVILSMGSAALFVLLLIRRFIIGAEVQGVFTLFAITFFMLGVIIFALGLLGEYIGRIY
HHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQVRARPRYLVQTILEQRDGEPVVAQPRQSILPGMQPAPVAHDEPRQGA
HHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNQSDPRTVAPELSVVIPVYNEEQGLAALFSRLYPALDALGTSYEVIFINDGSRDRSPAM
CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHH
LADQFRARPDTTRVILLNGNYGQHMAILAGFEQSRGQIVITLDADLQNPPEEIGKLCAKM
HHHHHCCCCCCCEEEEEECCCCCHHHEEECHHCCCCEEEEEEECCCCCCHHHHHHHHHHH
REGFDYVGTIRMQRRDSLWRRKASQAMNRLRERITRIKMTDQGCMLRAYSRHVIDTINRC
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
GEVNTFIPALAYTFAQNPVEIEVAHEERFAGESKYSVYSLIRLNFDLVTGFSVVPLQWLS
CCHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
FIGVILSMGSAALFVLLLIRRFIIGAEVQGVFTLFAITFFMLGVIIFALGLLGEYIGRIY
HHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQVRARPRYLVQTILEQRDGEPVVAQPRQSILPGMQPAPVAHDEPRQGA
HHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA