| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475692
Identifier: 186475692
GI number: 186475692
Start: 1029561
End: 1029986
Strand: Reverse
Name: 186475692
Synonym: Bphy_0927
Alternate gene names: NA
Gene position: 1029986-1029561 (Counterclockwise)
Preceding gene: 186475693
Following gene: 186475691
Centisome position: 29.6
GC content: 64.55
Gene sequence:
>426_bases ATGCCGCCCCGCAACGACAGCCCTGATCGCATTCCTCACCCCGACATCTCTTCGATGAACCCGATTTCCCTGTTCTGTAT CCTCGCGGGCGTCGCCCTCAACGCGACGGCCCAGCTGCTCCTGAAGGCCGGCACCAACGCGGTCGGCCACTTCGACTTCA CGCTGTCGAACATCATCCCCATCGGCTGGCGCATCGCGACGCAGTTGCCCATCATCGGCGGGCTTGCCTGCTACGTGCTG AGCGTGGTCGTGTGGATCGTCGGGCTGTCGCGCGTGGACGTATCGATCGCCTACCCGATGCTGTCGCTCGGCTATGTCGT GAACGCGTTCGCCGCGTGGTACCTGTTCGGCGAGGTGCTGTCGGCGCAACGCCTGATCGGCATCGGCGTGATCCTCGTCG GTGTGTTCATCGTGGCGCGCAGCTGA
Upstream 100 bases:
>100_bases ATGACCGTCGTCGCGCGCGACGCCCGCCGCGTGATCGTCGAGAAGCCGCTTCCCGCCGACGCGGGCGCCGCCGCGCAAGA CCCCGCGGCGTCGCAGCCCG
Downstream 100 bases:
>100_bases GTTCGGGCCCGGCGCGCATCACTTGCCTTTAGAGGCAACGCCCCTGGCAAGCTCGCGCAGGTCTGCTAATGTCTTCTGAA ATGTTTCGAGCGCTGGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: Small Multidrug Resistance Transmembrane Protein; QuateRNAry Ammonium Compound-Resistance Protein
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MPPRNDSPDRIPHPDISSMNPISLFCILAGVALNATAQLLLKAGTNAVGHFDFTLSNIIPIGWRIATQLPIIGGLACYVL SVVVWIVGLSRVDVSIAYPMLSLGYVVNAFAAWYLFGEVLSAQRLIGIGVILVGVFIVARS
Sequences:
>Translated_141_residues MPPRNDSPDRIPHPDISSMNPISLFCILAGVALNATAQLLLKAGTNAVGHFDFTLSNIIPIGWRIATQLPIIGGLACYVL SVVVWIVGLSRVDVSIAYPMLSLGYVVNAFAAWYLFGEVLSAQRLIGIGVILVGVFIVARS >Mature_140_residues PPRNDSPDRIPHPDISSMNPISLFCILAGVALNATAQLLLKAGTNAVGHFDFTLSNIIPIGWRIATQLPIIGGLACYVLS VVVWIVGLSRVDVSIAYPMLSLGYVVNAFAAWYLFGEVLSAQRLIGIGVILVGVFIVARS
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15062; Mature: 14931
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPRNDSPDRIPHPDISSMNPISLFCILAGVALNATAQLLLKAGTNAVGHFDFTLSNIIP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCC IGWRIATQLPIIGGLACYVLSVVVWIVGLSRVDVSIAYPMLSLGYVVNAFAAWYLFGEVL CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAQRLIGIGVILVGVFIVARS HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PPRNDSPDRIPHPDISSMNPISLFCILAGVALNATAQLLLKAGTNAVGHFDFTLSNIIP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCC IGWRIATQLPIIGGLACYVLSVVVWIVGLSRVDVSIAYPMLSLGYVVNAFAAWYLFGEVL CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAQRLIGIGVILVGVFIVARS HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA