Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186475586

Identifier: 186475586

GI number: 186475586

Start: 922147

End: 922539

Strand: Direct

Name: 186475586

Synonym: Bphy_0821

Alternate gene names: NA

Gene position: 922147-922539 (Clockwise)

Preceding gene: 186475585

Following gene: 186475587

Centisome position: 26.5

GC content: 64.63

Gene sequence:

>393_bases
ATGACGGACGCTGCGCTCGAACCGGTGCGCGTGTGCGCGTCGGAGGAACTCGTGGACGGCGGCGCGGGCGTTCGCATCGA
CGCGACGCACGCAGGCGGCGATGCTGTGGTGTTTTTTGTCCGCTATGACGGCGTTGCCTATGGTTATCTGAACCGGTGCG
CGCACGTGCCGATGGAACTGGACTGGAACGAGGGACAGTTCTTCGAGTCGTCGGGCCTATACTTGATGTGCGCGACACAT
GGTGCGATTTACGCGCCAGATACAGGCAAATGTGTGGGTGGACCGTGCCGCGGCGGCAGGCTTCGGCCGCTGCACGTCGC
CGAGCGCGATACCCCGGGAGGCCGTGCCGTATTTTGGCTGCCCGAAGCTGATCTGCGTCCGGCGTCTGCCTGA

Upstream 100 bases:

>100_bases
TCACTTATGGCGCGCATCCCGCCCGTTCGCTGGCGGCGCTGGAACCGAAATTCGTCGCGGACAGCATCGCATCGCTGTCG
GGCTGGCTGCGGGAGCACGC

Downstream 100 bases:

>100_bases
TTTCCCCGCAGTCTTTCCCAACTCGATTTCAATCGGCGGCAACGCATGTCCGACAATCTGACTCCCGATCCGAAGGAACC
TGCTGCGGCGAGCCGTGAAG

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: Rieske Region; Rieske Domain-Containing Protein; Rieske Protein; Ferredoxin; Rieske; Rieske Iron-Sulfur Domain Protein; Ferredoxin Protein; Nitrite Reductase Ferredoxin Subunit; Rieske Iron-Sulfur Domain-Containing Protein

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MTDAALEPVRVCASEELVDGGAGVRIDATHAGGDAVVFFVRYDGVAYGYLNRCAHVPMELDWNEGQFFESSGLYLMCATH
GAIYAPDTGKCVGGPCRGGRLRPLHVAERDTPGGRAVFWLPEADLRPASA

Sequences:

>Translated_130_residues
MTDAALEPVRVCASEELVDGGAGVRIDATHAGGDAVVFFVRYDGVAYGYLNRCAHVPMELDWNEGQFFESSGLYLMCATH
GAIYAPDTGKCVGGPCRGGRLRPLHVAERDTPGGRAVFWLPEADLRPASA
>Mature_129_residues
TDAALEPVRVCASEELVDGGAGVRIDATHAGGDAVVFFVRYDGVAYGYLNRCAHVPMELDWNEGQFFESSGLYLMCATHG
AIYAPDTGKCVGGPCRGGRLRPLHVAERDTPGGRAVFWLPEADLRPASA

Specific function: Unknown

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13872; Mature: 13741

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAALEPVRVCASEELVDGGAGVRIDATHAGGDAVVFFVRYDGVAYGYLNRCAHVPMEL
CCCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCEEEECHHHHHCCCEEE
DWNEGQFFESSGLYLMCATHGAIYAPDTGKCVGGPCRGGRLRPLHVAERDTPGGRAVFWL
ECCCCCEEECCCCEEEEECCCEEECCCCCCEECCCCCCCCCCEEEEECCCCCCCEEEEEE
PEADLRPASA
CCCCCCCCCC
>Mature Secondary Structure 
TDAALEPVRVCASEELVDGGAGVRIDATHAGGDAVVFFVRYDGVAYGYLNRCAHVPMEL
CCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCEEEECHHHHHCCCEEE
DWNEGQFFESSGLYLMCATHGAIYAPDTGKCVGGPCRGGRLRPLHVAERDTPGGRAVFWL
ECCCCCEEECCCCEEEEECCCEEECCCCCCEECCCCCCCCCCEEEEECCCCCCCEEEEEE
PEADLRPASA
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA