| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is aroA
Identifier: 186475509
GI number: 186475509
Start: 840037
End: 841341
Strand: Direct
Name: aroA
Synonym: Bphy_0744
Alternate gene names: 186475509
Gene position: 840037-841341 (Clockwise)
Preceding gene: 186475508
Following gene: 186475510
Centisome position: 24.14
GC content: 65.13
Gene sequence:
>1305_bases ATGGAACATCTCGATCTCGGACCATTTTCCCGTGCTTCCGGCACGGTTCGTCTGCCAGGCTCGAAGAGCATTTCGAACCG CGTGCTGCTGCTCGCGGCGTTGGCCGAAGGCGAGACGACGATCACGAATCTGCTCGATTCCGACGACACGCGGGTGATGC TCGACGCGCTCGAAAAGCTCGGCGTGAAGTTCAAGCGCGACGGCGACACCTGTGTCGTGACAGGCACGCGCGGCGCGCTG CCTGCGGCGCGCGCGGACCTCTTTCTCGGGAACGCCGGCACGGCGGTGCGGCCGCTGACAGCGGCGCTCGCCGTGAATGG CGGCGACTACCGGATTCACGGGGTGCCGCGCATGCACGAGCGGCCGATCGGCGATCTGGTCGACGGATTGCGGCAGATCG GCGCGAAGATCGACTACGAAGAGAACGAAGGCTTCCCGCCGCTGCGCATCCGCCCGGCGCAGATTTCGGTCGACGCGCCC ATCCGCGTGCGCGGCGACGTGTCGAGCCAGTTCCTGACGGCGCTGCTGATGACGCTGCCGCTCGTGAAGACGGAAAGCGG CGAGACGATTGTCGAAGTGTCAGGCGAACTGATTTCCAAGCCGTACATCGAGATCACGATCCGGCTGATGGAACGCTTCG GCATCAAGGTCGAGCGTTTCGGCTGGGAGCGCTTCACGATTCCGAGTGGCGTGCGTTATCAGTCGCCGGGCAAGATCATG GTGGAAGGCGACGCATCGTCGGCGTCGTACTTCCTCGCGGCGGGCGCGCTGGGCGGGGGGCCGCTGCGGGTCGAAGGCGT GGGGCGCGCGAGCATTCAGGGGGACGTCGGTTTCGCGACGGCGCTGATGAAGATGGGCGCGAACGTGACGATGGGGGACG ACTGGATCGAAGTGCGCGGCGTGGGCAACGATCACGGAAAGCTGGACCCGATCGACATGGACTTCAACCTGATCCCCGAT GCGGCGATGACCATCGCAGTGGCCGCGCTGTTCGCGGACGGCACGACCACGCTGCGCAATATCGGGAGCTGGCGCGTGAA GGAAACGGATCGGATCGCCGCGATGGCGACGGAGTTGAGCAAGGTCGGCGCAAAGGTGCAGGCGGGTGAGGATTTTCTCG TCGTGACGCCACCCGAGCAACTGACGCCGAACGCCGCGATCGACACCTACGACGACCACCGGATGGCGATGTGCTTCTCT CTGGTGAGCCTCGGCGGCGTGCCCGTCCGGATCAACGATCCGAAATGCGTCGGCAAGACGTTCCCCGATTATTTCGAGCG TTTCCTGGCGCTCACGCAACCCTGA
Upstream 100 bases:
>100_bases CGCAGCGCCTGGCAGGAGCGCGCTGCGTCCGCACGTCAGGCATCGCCCGCACGTTCGGCCAACGACGAAGCGTCGAAATA AAGGACCTTGGAATTCATAT
Downstream 100 bases:
>100_bases CACCGCATTGCTAACCCGTGCCGCCCGTTCCGACGGACGACCTTTTCGATGAAACCGACCCGCCCCTTTCACCAGACGCC CGTTATCACGATCGACGGCC
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MEHLDLGPFSRASGTVRLPGSKSISNRVLLLAALAEGETTITNLLDSDDTRVMLDALEKLGVKFKRDGDTCVVTGTRGAL PAARADLFLGNAGTAVRPLTAALAVNGGDYRIHGVPRMHERPIGDLVDGLRQIGAKIDYEENEGFPPLRIRPAQISVDAP IRVRGDVSSQFLTALLMTLPLVKTESGETIVEVSGELISKPYIEITIRLMERFGIKVERFGWERFTIPSGVRYQSPGKIM VEGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFATALMKMGANVTMGDDWIEVRGVGNDHGKLDPIDMDFNLIPD AAMTIAVAALFADGTTTLRNIGSWRVKETDRIAAMATELSKVGAKVQAGEDFLVVTPPEQLTPNAAIDTYDDHRMAMCFS LVSLGGVPVRINDPKCVGKTFPDYFERFLALTQP
Sequences:
>Translated_434_residues MEHLDLGPFSRASGTVRLPGSKSISNRVLLLAALAEGETTITNLLDSDDTRVMLDALEKLGVKFKRDGDTCVVTGTRGAL PAARADLFLGNAGTAVRPLTAALAVNGGDYRIHGVPRMHERPIGDLVDGLRQIGAKIDYEENEGFPPLRIRPAQISVDAP IRVRGDVSSQFLTALLMTLPLVKTESGETIVEVSGELISKPYIEITIRLMERFGIKVERFGWERFTIPSGVRYQSPGKIM VEGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFATALMKMGANVTMGDDWIEVRGVGNDHGKLDPIDMDFNLIPD AAMTIAVAALFADGTTTLRNIGSWRVKETDRIAAMATELSKVGAKVQAGEDFLVVTPPEQLTPNAAIDTYDDHRMAMCFS LVSLGGVPVRINDPKCVGKTFPDYFERFLALTQP >Mature_434_residues MEHLDLGPFSRASGTVRLPGSKSISNRVLLLAALAEGETTITNLLDSDDTRVMLDALEKLGVKFKRDGDTCVVTGTRGAL PAARADLFLGNAGTAVRPLTAALAVNGGDYRIHGVPRMHERPIGDLVDGLRQIGAKIDYEENEGFPPLRIRPAQISVDAP IRVRGDVSSQFLTALLMTLPLVKTESGETIVEVSGELISKPYIEITIRLMERFGIKVERFGWERFTIPSGVRYQSPGKIM VEGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFATALMKMGANVTMGDDWIEVRGVGNDHGKLDPIDMDFNLIPD AAMTIAVAALFADGTTTLRNIGSWRVKETDRIAAMATELSKVGAKVQAGEDFLVVTPPEQLTPNAAIDTYDDHRMAMCFS LVSLGGVPVRINDPKCVGKTFPDYFERFLALTQP
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=436, Percent_Identity=57.5688073394495, Blast_Score=466, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6320332, Length=450, Percent_Identity=40.2222222222222, Blast_Score=254, Evalue=2e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_BURP8 (B2JF04)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001856979.1 - ProteinModelPortal: B2JF04 - SMR: B2JF04 - GeneID: 6242242 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_0744 - HOGENOM: HBG646626 - OMA: GADIEWG - ProtClustDB: PRK02427 - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 46632; Mature: 46632
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHLDLGPFSRASGTVRLPGSKSISNRVLLLAALAEGETTITNLLDSDDTRVMLDALEKL CCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHC GVKFKRDGDTCVVTGTRGALPAARADLFLGNAGTAVRPLTAALAVNGGDYRIHGVPRMHE CCEEEECCCEEEEECCCCCCCCCHHEEEECCCCCCHHHEEEEEEECCCCEEEECCCCHHC RPIGDLVDGLRQIGAKIDYEENEGFPPLRIRPAQISVDAPIRVRGDVSSQFLTALLMTLP CCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCEEEECCCHHHHHHHHHHHHC LVKTESGETIVEVSGELISKPYIEITIRLMERFGIKVERFGWERFTIPSGVRYQSPGKIM CEECCCCCEEEEECHHHHCCCHHHHHHHHHHHHCCEEEEECCEEEECCCCCEECCCCEEE VEGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFATALMKMGANVTMGDDWIEVRG EECCCCCCEEEEEECCCCCCCEEEEECCCEECCCCHHHHHHHHHCCCCEEECCCEEEEEE VGNDHGKLDPIDMDFNLIPDAAMTIAVAALFADGTTTLRNIGSWRVKETDRIAAMATELS CCCCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCHHHHHCCCEEECCHHHHHHHHHHHH KVGAKVQAGEDFLVVTPPEQLTPNAAIDTYDDHRMAMCFSLVSLGGVPVRINDPKCVGKT HHCCEEECCCCEEEECCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCC FPDYFERFLALTQP CHHHHHHHHHCCCC >Mature Secondary Structure MEHLDLGPFSRASGTVRLPGSKSISNRVLLLAALAEGETTITNLLDSDDTRVMLDALEKL CCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHC GVKFKRDGDTCVVTGTRGALPAARADLFLGNAGTAVRPLTAALAVNGGDYRIHGVPRMHE CCEEEECCCEEEEECCCCCCCCCHHEEEECCCCCCHHHEEEEEEECCCCEEEECCCCHHC RPIGDLVDGLRQIGAKIDYEENEGFPPLRIRPAQISVDAPIRVRGDVSSQFLTALLMTLP CCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCEEEECCCHHHHHHHHHHHHC LVKTESGETIVEVSGELISKPYIEITIRLMERFGIKVERFGWERFTIPSGVRYQSPGKIM CEECCCCCEEEEECHHHHCCCHHHHHHHHHHHHCCEEEEECCEEEECCCCCEECCCCEEE VEGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFATALMKMGANVTMGDDWIEVRG EECCCCCCEEEEEECCCCCCCEEEEECCCEECCCCHHHHHHHHHCCCCEEECCCEEEEEE VGNDHGKLDPIDMDFNLIPDAAMTIAVAALFADGTTTLRNIGSWRVKETDRIAAMATELS CCCCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCHHHHHCCCEEECCHHHHHHHHHHHH KVGAKVQAGEDFLVVTPPEQLTPNAAIDTYDDHRMAMCFSLVSLGGVPVRINDPKCVGKT HHCCEEECCCCEEEECCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCC FPDYFERFLALTQP CHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA