Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is tyrA [H]

Identifier: 186475508

GI number: 186475508

Start: 839013

End: 840017

Strand: Direct

Name: tyrA [H]

Synonym: Bphy_0743

Alternate gene names: 186475508

Gene position: 839013-840017 (Clockwise)

Preceding gene: 186475507

Following gene: 186475509

Centisome position: 24.12

GC content: 66.77

Gene sequence:

>1005_bases
ATGCAATCCATGCGCCTCATCGACTACGAGGCGCTTTTTTCTGTGACTGACGTGGCAGCGTTCTCTTTCGACAAACTGGT
GATTTTTGGCGTCGGGCTGATCGGTGGCTCGCTCGCGCGCGCATTGCGCGAGCGCGGCGACATCGGTGGCGCGCGACGCG
TGATCGGCGTCGGGCGCTCAGCGGCTTCGACTGCGCGGGCGATGGAACTGGGCGTGATCGACGGCAGCGCGGCGTTGACG
GACGACGCGGCATTGCGCGACGCGCTCGACGGGGCGGACGTGGTGCTGCTGGCCGCCCCCGTCGCGCAGACGCAACCGCT
GCTCGAACGGATTGCGCCGTTTCTGGGTCCGAAGACAATCATCACCGACGCCGGCAGCACCAAGTCCGATGTCGTCGCAG
CGGCGCGCGCAGTGCTTGGCGAGCGCATCTGTCAGTTCGTACCGGGACATCCGATAGCGGGCCGCGAATCGAGCGGTGTC
GATGCCGCGCTGCCGGACCTGTACGTGAACCGGAACGTCGTGCTGTGCGCGTTGCCGGAGAACGCCGGGGATGACGTCGA
GCGTATCGCCGCGATGTGGCGCGCGACGGGCGCGAGTGTGCACGCGATGCCGCCCGAACAGCATGACCGCGTGTTCGCGT
CGGTCAGCCATCTGCCTCACGTGTTGTCGTTCGCGCTGGTCGAGCAGATTCTCAATTCATCGGACGCCGAGCTGAAGTTC
TCGTTTGCGGCAGGCGGATTCCGCGACTTCACGCGCATCGCCGCGTCGAGCCCGGAAATGTGGCGCGACGTGTGCGTGGC
CAATCGTGCCGCGCTGCTGAGCGAAATCGACGACTACACGGCTGTGCTGGCACATCTGAGGTCGGCGATCGACGCTGGCG
ACGGCGCGACGCTCGAAGCTGTGTTCGCGCGCTCGCGCACCGCCCGCAGCGCCTGGCAGGAGCGCGCTGCGTCCGCACGT
CAGGCATCGCCCGCACGTTCGGCCAACGACGAAGCGTCGAAATAA

Upstream 100 bases:

>100_bases
GTCTGCCGCAGTGGTTGCGCGTGACGATCGGCCTGCCCGAAGAAAATGAAGCGTTTATCGCGGCGCTCGAAAAGACCCTG
GCGACGGCCTGAGCGGATCC

Downstream 100 bases:

>100_bases
AGGACCTTGGAATTCATATATGGAACATCTCGATCTCGGACCATTTTCCCGTGCTTCCGGCACGGTTCGTCTGCCAGGCT
CGAAGAGCATTTCGAACCGC

Product: prephenate dehydrogenase

Products: NA

Alternate protein names: PDH [H]

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MQSMRLIDYEALFSVTDVAAFSFDKLVIFGVGLIGGSLARALRERGDIGGARRVIGVGRSAASTARAMELGVIDGSAALT
DDAALRDALDGADVVLLAAPVAQTQPLLERIAPFLGPKTIITDAGSTKSDVVAAARAVLGERICQFVPGHPIAGRESSGV
DAALPDLYVNRNVVLCALPENAGDDVERIAAMWRATGASVHAMPPEQHDRVFASVSHLPHVLSFALVEQILNSSDAELKF
SFAAGGFRDFTRIAASSPEMWRDVCVANRAALLSEIDDYTAVLAHLRSAIDAGDGATLEAVFARSRTARSAWQERAASAR
QASPARSANDEASK

Sequences:

>Translated_334_residues
MQSMRLIDYEALFSVTDVAAFSFDKLVIFGVGLIGGSLARALRERGDIGGARRVIGVGRSAASTARAMELGVIDGSAALT
DDAALRDALDGADVVLLAAPVAQTQPLLERIAPFLGPKTIITDAGSTKSDVVAAARAVLGERICQFVPGHPIAGRESSGV
DAALPDLYVNRNVVLCALPENAGDDVERIAAMWRATGASVHAMPPEQHDRVFASVSHLPHVLSFALVEQILNSSDAELKF
SFAAGGFRDFTRIAASSPEMWRDVCVANRAALLSEIDDYTAVLAHLRSAIDAGDGATLEAVFARSRTARSAWQERAASAR
QASPARSANDEASK
>Mature_334_residues
MQSMRLIDYEALFSVTDVAAFSFDKLVIFGVGLIGGSLARALRERGDIGGARRVIGVGRSAASTARAMELGVIDGSAALT
DDAALRDALDGADVVLLAAPVAQTQPLLERIAPFLGPKTIITDAGSTKSDVVAAARAVLGERICQFVPGHPIAGRESSGV
DAALPDLYVNRNVVLCALPENAGDDVERIAAMWRATGASVHAMPPEQHDRVFASVSHLPHVLSFALVEQILNSSDAELKF
SFAAGGFRDFTRIAASSPEMWRDVCVANRAALLSEIDDYTAVLAHLRSAIDAGDGATLEAVFARSRTARSAWQERAASAR
QASPARSANDEASK

Specific function: Unknown

COG id: COG0287

COG function: function code E; Prephenate dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR002912
- InterPro:   IPR016040
- InterPro:   IPR003099 [H]

Pfam domain/function: PF01842 ACT; PF02153 PDH [H]

EC number: =1.3.1.12 [H]

Molecular weight: Translated: 35166; Mature: 35166

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSMRLIDYEALFSVTDVAAFSFDKLVIFGVGLIGGSLARALRERGDIGGARRVIGVGRS
CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCH
AASTARAMELGVIDGSAALTDDAALRDALDGADVVLLAAPVAQTQPLLERIAPFLGPKTI
HHHHHHHHHEEEECCCCCCCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEE
ITDAGSTKSDVVAAARAVLGERICQFVPGHPIAGRESSGVDAALPDLYVNRNVVLCALPE
EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEECCCEEEEECCC
NAGDDVERIAAMWRATGASVHAMPPEQHDRVFASVSHLPHVLSFALVEQILNSSDAELKF
CCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
SFAAGGFRDFTRIAASSPEMWRDVCVANRAALLSEIDDYTAVLAHLRSAIDAGDGATLEA
EECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
VFARSRTARSAWQERAASARQASPARSANDEASK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQSMRLIDYEALFSVTDVAAFSFDKLVIFGVGLIGGSLARALRERGDIGGARRVIGVGRS
CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCH
AASTARAMELGVIDGSAALTDDAALRDALDGADVVLLAAPVAQTQPLLERIAPFLGPKTI
HHHHHHHHHEEEECCCCCCCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEE
ITDAGSTKSDVVAAARAVLGERICQFVPGHPIAGRESSGVDAALPDLYVNRNVVLCALPE
EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEECCCEEEEECCC
NAGDDVERIAAMWRATGASVHAMPPEQHDRVFASVSHLPHVLSFALVEQILNSSDAELKF
CCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
SFAAGGFRDFTRIAASSPEMWRDVCVANRAALLSEIDDYTAVLAHLRSAIDAGDGATLEA
EECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
VFARSRTARSAWQERAASARQASPARSANDEASK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3106153; 9384377 [H]