| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is cmk
Identifier: 186475510
GI number: 186475510
Start: 841390
End: 842076
Strand: Direct
Name: cmk
Synonym: Bphy_0745
Alternate gene names: 186475510
Gene position: 841390-842076 (Clockwise)
Preceding gene: 186475509
Following gene: 186475511
Centisome position: 24.18
GC content: 64.48
Gene sequence:
>687_bases ATGAAACCGACCCGCCCCTTTCACCAGACGCCCGTTATCACGATCGACGGCCCCACCGCATCCGGCAAAGGCACGGTGGC CGCGCTGGTCGCCGCCGAACTCGGCTTCCATCTGCTGGACAGCGGCGCGCTGTACCGTCTCGCTGCGCTCGCGAGCGTAC GCTACGACATCGCCGCCGACGACGCCGAAGCACTTGCAAAACTGGTCGGCGAGCTCCATATCACTTTCCGCGAGGGCATC GCACAGCTGGACGGCGCCGACGTGTCGACTGACATCCGTGCCGAGGAAATCGGCAACCGTGCCTCGGCAATCGCCATTCA TGCACCCGTCCGGGCGGCGCTAGTGGCCCGTCAGCGGGCTTTCCGCAAGCAGCCCGGCCTCGTCGCGGACGGCCGCGACA TGGGCACCGTGATCTTTCCTGACGCCGCGCTGAAGGTGTTTTTGACGGCCAGCGTCGAGGCGCGCGCAACCCGCCGGCAT AAGCAATTGATCCAAAAAGGATTTTCTGCTAATATGGATGACTTGCTCCGGGATTTGCGTGAACGCGACGAGCGCGACAG TCAGCGCGCGGCCGCGCCGCTCAAGCCTGCAGCAGATGCGCAGCTTCTCGACACCTCTGCATTGTCGGTCGACCAGGCGG TCGAACAGGTGGTGCAATGGTACCGGGCGCTTGTTCCGCAAAGCTGA
Upstream 100 bases:
>100_bases CAAGACGTTCCCCGATTATTTCGAGCGTTTCCTGGCGCTCACGCAACCCTGACACCGCATTGCTAACCCGTGCCGCCCGT TCCGACGGACGACCTTTTCG
Downstream 100 bases:
>100_bases AGGCGGAAGGATCCGCATCAAATGTTTTTATGTTGTTGTGTTGGTGCTTTGCGGTGATACGCGAGGCGATTGTTTAACCT TTAACCCCGTGTGGCTTTCG
Product: cytidylate kinase
Products: NA
Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MKPTRPFHQTPVITIDGPTASGKGTVAALVAAELGFHLLDSGALYRLAALASVRYDIAADDAEALAKLVGELHITFREGI AQLDGADVSTDIRAEEIGNRASAIAIHAPVRAALVARQRAFRKQPGLVADGRDMGTVIFPDAALKVFLTASVEARATRRH KQLIQKGFSANMDDLLRDLRERDERDSQRAAAPLKPAADAQLLDTSALSVDQAVEQVVQWYRALVPQS
Sequences:
>Translated_228_residues MKPTRPFHQTPVITIDGPTASGKGTVAALVAAELGFHLLDSGALYRLAALASVRYDIAADDAEALAKLVGELHITFREGI AQLDGADVSTDIRAEEIGNRASAIAIHAPVRAALVARQRAFRKQPGLVADGRDMGTVIFPDAALKVFLTASVEARATRRH KQLIQKGFSANMDDLLRDLRERDERDSQRAAAPLKPAADAQLLDTSALSVDQAVEQVVQWYRALVPQS >Mature_228_residues MKPTRPFHQTPVITIDGPTASGKGTVAALVAAELGFHLLDSGALYRLAALASVRYDIAADDAEALAKLVGELHITFREGI AQLDGADVSTDIRAEEIGNRASAIAIHAPVRAALVARQRAFRKQPGLVADGRDMGTVIFPDAALKVFLTASVEARATRRH KQLIQKGFSANMDDLLRDLRERDERDSQRAAAPLKPAADAQLLDTSALSVDQAVEQVVQWYRALVPQS
Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1787139, Length=216, Percent_Identity=51.3888888888889, Blast_Score=215, Evalue=2e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KCY_BURP8 (B2JF05)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001856980.1 - ProteinModelPortal: B2JF05 - SMR: B2JF05 - GeneID: 6242243 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_0745 - HOGENOM: HBG354377 - OMA: DIGTVIC - ProtClustDB: PRK00023 - GO: GO:0005737 - HAMAP: MF_00238 - InterPro: IPR003136 - InterPro: IPR011994 - PANTHER: PTHR21299:SF2 - TIGRFAMs: TIGR00017
Pfam domain/function: PF02224 Cytidylate_kin
EC number: =2.7.4.14
Molecular weight: Translated: 24539; Mature: 24539
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTRPFHQTPVITIDGPTASGKGTVAALVAAELGFHLLDSGALYRLAALASVRYDIAAD CCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC DAEALAKLVGELHITFREGIAQLDGADVSTDIRAEEIGNRASAIAIHAPVRAALVARQRA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHH FRKQPGLVADGRDMGTVIFPDAALKVFLTASVEARATRRHKQLIQKGFSANMDDLLRDLR HHHCCCCEECCCCCCEEEECCHHEEEEHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH ERDERDSQRAAAPLKPAADAQLLDTSALSVDQAVEQVVQWYRALVPQS HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKPTRPFHQTPVITIDGPTASGKGTVAALVAAELGFHLLDSGALYRLAALASVRYDIAAD CCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC DAEALAKLVGELHITFREGIAQLDGADVSTDIRAEEIGNRASAIAIHAPVRAALVARQRA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHH FRKQPGLVADGRDMGTVIFPDAALKVFLTASVEARATRRHKQLIQKGFSANMDDLLRDLR HHHCCCCEECCCCCCEEEECCHHEEEEHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH ERDERDSQRAAAPLKPAADAQLLDTSALSVDQAVEQVVQWYRALVPQS HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA