Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is cmk

Identifier: 186475510

GI number: 186475510

Start: 841390

End: 842076

Strand: Direct

Name: cmk

Synonym: Bphy_0745

Alternate gene names: 186475510

Gene position: 841390-842076 (Clockwise)

Preceding gene: 186475509

Following gene: 186475511

Centisome position: 24.18

GC content: 64.48

Gene sequence:

>687_bases
ATGAAACCGACCCGCCCCTTTCACCAGACGCCCGTTATCACGATCGACGGCCCCACCGCATCCGGCAAAGGCACGGTGGC
CGCGCTGGTCGCCGCCGAACTCGGCTTCCATCTGCTGGACAGCGGCGCGCTGTACCGTCTCGCTGCGCTCGCGAGCGTAC
GCTACGACATCGCCGCCGACGACGCCGAAGCACTTGCAAAACTGGTCGGCGAGCTCCATATCACTTTCCGCGAGGGCATC
GCACAGCTGGACGGCGCCGACGTGTCGACTGACATCCGTGCCGAGGAAATCGGCAACCGTGCCTCGGCAATCGCCATTCA
TGCACCCGTCCGGGCGGCGCTAGTGGCCCGTCAGCGGGCTTTCCGCAAGCAGCCCGGCCTCGTCGCGGACGGCCGCGACA
TGGGCACCGTGATCTTTCCTGACGCCGCGCTGAAGGTGTTTTTGACGGCCAGCGTCGAGGCGCGCGCAACCCGCCGGCAT
AAGCAATTGATCCAAAAAGGATTTTCTGCTAATATGGATGACTTGCTCCGGGATTTGCGTGAACGCGACGAGCGCGACAG
TCAGCGCGCGGCCGCGCCGCTCAAGCCTGCAGCAGATGCGCAGCTTCTCGACACCTCTGCATTGTCGGTCGACCAGGCGG
TCGAACAGGTGGTGCAATGGTACCGGGCGCTTGTTCCGCAAAGCTGA

Upstream 100 bases:

>100_bases
CAAGACGTTCCCCGATTATTTCGAGCGTTTCCTGGCGCTCACGCAACCCTGACACCGCATTGCTAACCCGTGCCGCCCGT
TCCGACGGACGACCTTTTCG

Downstream 100 bases:

>100_bases
AGGCGGAAGGATCCGCATCAAATGTTTTTATGTTGTTGTGTTGGTGCTTTGCGGTGATACGCGAGGCGATTGTTTAACCT
TTAACCCCGTGTGGCTTTCG

Product: cytidylate kinase

Products: NA

Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKPTRPFHQTPVITIDGPTASGKGTVAALVAAELGFHLLDSGALYRLAALASVRYDIAADDAEALAKLVGELHITFREGI
AQLDGADVSTDIRAEEIGNRASAIAIHAPVRAALVARQRAFRKQPGLVADGRDMGTVIFPDAALKVFLTASVEARATRRH
KQLIQKGFSANMDDLLRDLRERDERDSQRAAAPLKPAADAQLLDTSALSVDQAVEQVVQWYRALVPQS

Sequences:

>Translated_228_residues
MKPTRPFHQTPVITIDGPTASGKGTVAALVAAELGFHLLDSGALYRLAALASVRYDIAADDAEALAKLVGELHITFREGI
AQLDGADVSTDIRAEEIGNRASAIAIHAPVRAALVARQRAFRKQPGLVADGRDMGTVIFPDAALKVFLTASVEARATRRH
KQLIQKGFSANMDDLLRDLRERDERDSQRAAAPLKPAADAQLLDTSALSVDQAVEQVVQWYRALVPQS
>Mature_228_residues
MKPTRPFHQTPVITIDGPTASGKGTVAALVAAELGFHLLDSGALYRLAALASVRYDIAADDAEALAKLVGELHITFREGI
AQLDGADVSTDIRAEEIGNRASAIAIHAPVRAALVARQRAFRKQPGLVADGRDMGTVIFPDAALKVFLTASVEARATRRH
KQLIQKGFSANMDDLLRDLRERDERDSQRAAAPLKPAADAQLLDTSALSVDQAVEQVVQWYRALVPQS

Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]

COG id: COG0283

COG function: function code F; Cytidylate kinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1787139, Length=216, Percent_Identity=51.3888888888889, Blast_Score=215, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KCY_BURP8 (B2JF05)

Other databases:

- EMBL:   CP001043
- RefSeq:   YP_001856980.1
- ProteinModelPortal:   B2JF05
- SMR:   B2JF05
- GeneID:   6242243
- GenomeReviews:   CP001043_GR
- KEGG:   bph:Bphy_0745
- HOGENOM:   HBG354377
- OMA:   DIGTVIC
- ProtClustDB:   PRK00023
- GO:   GO:0005737
- HAMAP:   MF_00238
- InterPro:   IPR003136
- InterPro:   IPR011994
- PANTHER:   PTHR21299:SF2
- TIGRFAMs:   TIGR00017

Pfam domain/function: PF02224 Cytidylate_kin

EC number: =2.7.4.14

Molecular weight: Translated: 24539; Mature: 24539

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTRPFHQTPVITIDGPTASGKGTVAALVAAELGFHLLDSGALYRLAALASVRYDIAAD
CCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
DAEALAKLVGELHITFREGIAQLDGADVSTDIRAEEIGNRASAIAIHAPVRAALVARQRA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHH
FRKQPGLVADGRDMGTVIFPDAALKVFLTASVEARATRRHKQLIQKGFSANMDDLLRDLR
HHHCCCCEECCCCCCEEEECCHHEEEEHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ERDERDSQRAAAPLKPAADAQLLDTSALSVDQAVEQVVQWYRALVPQS
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKPTRPFHQTPVITIDGPTASGKGTVAALVAAELGFHLLDSGALYRLAALASVRYDIAAD
CCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
DAEALAKLVGELHITFREGIAQLDGADVSTDIRAEEIGNRASAIAIHAPVRAALVARQRA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHH
FRKQPGLVADGRDMGTVIFPDAALKVFLTASVEARATRRHKQLIQKGFSANMDDLLRDLR
HHHCCCCEECCCCCCEEEECCHHEEEEHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ERDERDSQRAAAPLKPAADAQLLDTSALSVDQAVEQVVQWYRALVPQS
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA