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The map label for this gene is ompA [H]

Identifier: 186475502

GI number: 186475502

Start: 830843

End: 831490

Strand: Reverse

Name: ompA [H]

Synonym: Bphy_0737

Alternate gene names: 186475502

Gene position: 831490-830843 (Counterclockwise)

Preceding gene: 186475520

Following gene: 186475501

Centisome position: 23.9

GC content: 59.1

Gene sequence:

>648_bases
ATGAATAAACTTTCAAAGCTCGCGTTCATTGCAGCTACCGCAGTTATGGCTGCATCCGCTTCGGCACAGTCGGTGCCGGC
GTCGCGACAAGCCACGAACGACAACTGGGTGAACGGCACCGGCGAATACGTGTGGATGAACGGCACGAACGAGCTTTGCT
GGCGCGATGCGTTCTGGACGCCGGCAACGGCTAACGCAAAGTGCGATGGCGCACTGGTCGCACAAGCACCGACCCCGCCG
GCACCGGCACCGGTTGCTCCGGCAATCACCAGCCAGAAGATCACGTATCAAGCTGACACGCTGTTCGATTTCGACAAGGC
TATCCTGAAGCCGGCCGGCAAGGAAAAACTGGACGATCTGGCATCGAAGATTCAAGGCCTGAACCTGGAAGTCGTCGTGG
CCACGGGCTACACCGACCGCATCGGTTCGGACAAGTACAACGACCGTCTGTCGCTGCGTCGCGCACAAGCTGTCAAGGCA
TACCTGGTCAGCAAGGGCATCGAAGCCAACCGCATCTACACGGAAGGCAAGGGCAAGCGCAATCCGGTCACGACGGGCTG
CAACCAGAAGAACCGCAAGCAACTCATCGCCTGCCTCGCACCGGATCGTCGCGTGGAAGTCGAAGTTGTCGGTACTTCGA
AGCAGTAA

Upstream 100 bases:

>100_bases
TTTGTTCTGCACCGATGTTATACTTCGAGCAATGTATGACTGGTCTACGTCAACAGGCTCGCAGTAAACCTGCGGTAATC
TCAATTTCGAGAGGAGAAAT

Downstream 100 bases:

>100_bases
GCGAAAGAATACCGCAGTACCCAAGCCCCGCTTCGGCGGGGCTTTTTTATGCCTGCGATGGCCGCTTCAAAATGGCGCGT
TCCGGCGCGCCGCTGCGCGT

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MNKLSKLAFIAATAVMAASASAQSVPASRQATNDNWVNGTGEYVWMNGTNELCWRDAFWTPATANAKCDGALVAQAPTPP
APAPVAPAITSQKITYQADTLFDFDKAILKPAGKEKLDDLASKIQGLNLEVVVATGYTDRIGSDKYNDRLSLRRAQAVKA
YLVSKGIEANRIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTSKQ

Sequences:

>Translated_215_residues
MNKLSKLAFIAATAVMAASASAQSVPASRQATNDNWVNGTGEYVWMNGTNELCWRDAFWTPATANAKCDGALVAQAPTPP
APAPVAPAITSQKITYQADTLFDFDKAILKPAGKEKLDDLASKIQGLNLEVVVATGYTDRIGSDKYNDRLSLRRAQAVKA
YLVSKGIEANRIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTSKQ
>Mature_215_residues
MNKLSKLAFIAATAVMAASASAQSVPASRQATNDNWVNGTGEYVWMNGTNELCWRDAFWTPATANAKCDGALVAQAPTPP
APAPVAPAITSQKITYQADTLFDFDKAILKPAGKEKLDDLASKIQGLNLEVVVATGYTDRIGSDKYNDRLSLRRAQAVKA
YLVSKGIEANRIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTSKQ

Specific function: Structural protein that may protect the integrity of the bacterium [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=127, Percent_Identity=53.5433070866142, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI48994946, Length=108, Percent_Identity=35.1851851851852, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 23175; Mature: 23175

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLSKLAFIAATAVMAASASAQSVPASRQATNDNWVNGTGEYVWMNGTNELCWRDAFWT
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCC
PATANAKCDGALVAQAPTPPAPAPVAPAITSQKITYQADTLFDFDKAILKPAGKEKLDDL
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHH
ASKIQGLNLEVVVATGYTDRIGSDKYNDRLSLRRAQAVKAYLVSKGIEANRIYTEGKGKR
HHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
NPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTSKQ
CCCCCCCCCCCHHHEEEEECCCCEEEEEEEECCCC
>Mature Secondary Structure
MNKLSKLAFIAATAVMAASASAQSVPASRQATNDNWVNGTGEYVWMNGTNELCWRDAFWT
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCC
PATANAKCDGALVAQAPTPPAPAPVAPAITSQKITYQADTLFDFDKAILKPAGKEKLDDL
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHH
ASKIQGLNLEVVVATGYTDRIGSDKYNDRLSLRRAQAVKAYLVSKGIEANRIYTEGKGKR
HHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
NPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTSKQ
CCCCCCCCCCCHHHEEEEECCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1447140 [H]