| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is ubiG
Identifier: 186475501
GI number: 186475501
Start: 829938
End: 830636
Strand: Reverse
Name: ubiG
Synonym: Bphy_0736
Alternate gene names: 186475501
Gene position: 830636-829938 (Counterclockwise)
Preceding gene: 186475502
Following gene: 186475500
Centisome position: 23.87
GC content: 60.37
Gene sequence:
>699_bases ATGACCAACGCCGATCCCCACGAACTGCAGAAATTCAGCGATCTCGCGCATCGCTGGTGGGACCCGAATGCTGAGTTCAA ACCTCTGCACGAACTGAATCCCGTTCGGCTCAAATGGATCGACTCCCATGCGCACCTCACAGGCAAGCGCGTGCTCGACA TCGGGTGCGGCGGCGGCATTTTGTCCGAGTCGATGGCGACCTTGGGTGCTGACGTGAAGGGAATTGACCTGTCCAATGAG GCGTTGGGCGTCGCAGATCTTCACAGCCTTGAAAGCGGTGTAACCGTAAATTACGAGGAAATCGCGGCGGAGACGCTGGC GGCCCGTGAACCGGCCTCTTTCGACGTTGCCACATGCATGGAAATGCTCGAGCACGTGCCGGATCCGTCGAAGGTCGTCG AGGCTTGCAAGACGCTCGTCAAGCCTGGCGGATGGGTGTTCTTTTCAACGCTCAACCGCAATGTGAAGTCATATCTGTTT GCCGTGATCGGTGCCGAGTACGTCGCGCGCATGCTGCCGAAGGGCACGCACGATTACGCCCGCTTCATCCGCCCGTCGGA GCTCGCGGGCTTCGCACGCGCGGCGGGTTTGCTGACCGCGGATATCAAGGGCATCACCTACAACCCGCTGACGCGCGATT TCGGCCTGTCGAGCGACACCGATGTGAACTACATGCTCGCGTGCCGCCGCGAAGCCTGA
Upstream 100 bases:
>100_bases CGTCCGTGACCCGTCGCTTTTGCCCGCGCGTGCACACCTCTATATACTCAGGGTTTGTCCGATCCACCCCGCTCTTCCTG CCCTCGAGGCCGTATTCGTC
Downstream 100 bases:
>100_bases TCCATTTTTTTGCGCCCGATTAACTGCATCTACTTCAATGAGCGATCCCACGCCCCTGCCTCAGCGCGAAGACGAAGAAG CATCGATCGGCCTTTGCCAG
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTNADPHELQKFSDLAHRWWDPNAEFKPLHELNPVRLKWIDSHAHLTGKRVLDIGCGGGILSESMATLGADVKGIDLSNE ALGVADLHSLESGVTVNYEEIAAETLAAREPASFDVATCMEMLEHVPDPSKVVEACKTLVKPGGWVFFSTLNRNVKSYLF AVIGAEYVARMLPKGTHDYARFIRPSELAGFARAAGLLTADIKGITYNPLTRDFGLSSDTDVNYMLACRREA
Sequences:
>Translated_232_residues MTNADPHELQKFSDLAHRWWDPNAEFKPLHELNPVRLKWIDSHAHLTGKRVLDIGCGGGILSESMATLGADVKGIDLSNE ALGVADLHSLESGVTVNYEEIAAETLAAREPASFDVATCMEMLEHVPDPSKVVEACKTLVKPGGWVFFSTLNRNVKSYLF AVIGAEYVARMLPKGTHDYARFIRPSELAGFARAAGLLTADIKGITYNPLTRDFGLSSDTDVNYMLACRREA >Mature_231_residues TNADPHELQKFSDLAHRWWDPNAEFKPLHELNPVRLKWIDSHAHLTGKRVLDIGCGGGILSESMATLGADVKGIDLSNEA LGVADLHSLESGVTVNYEEIAAETLAAREPASFDVATCMEMLEHVPDPSKVVEACKTLVKPGGWVFFSTLNRNVKSYLFA VIGAEYVARMLPKGTHDYARFIRPSELAGFARAAGLLTADIKGITYNPLTRDFGLSSDTDVNYMLACRREA
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family
Homologues:
Organism=Homo sapiens, GI118600965, Length=238, Percent_Identity=33.6134453781513, Blast_Score=155, Evalue=3e-38, Organism=Escherichia coli, GI1788564, Length=230, Percent_Identity=56.5217391304348, Blast_Score=267, Evalue=5e-73, Organism=Caenorhabditis elegans, GI115533050, Length=234, Percent_Identity=31.1965811965812, Blast_Score=122, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6324476, Length=282, Percent_Identity=30.1418439716312, Blast_Score=122, Evalue=4e-29, Organism=Drosophila melanogaster, GI281365311, Length=244, Percent_Identity=29.5081967213115, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI24585589, Length=232, Percent_Identity=29.7413793103448, Blast_Score=120, Evalue=9e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UBIG_BURP8 (B2JEZ6)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001856971.1 - ProteinModelPortal: B2JEZ6 - SMR: B2JEZ6 - GeneID: 6242234 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_0736 - HOGENOM: HBG738842 - OMA: DHAEIAK - ProtClustDB: PRK05134 - HAMAP: MF_00472 - InterPro: IPR013216 - InterPro: IPR010233 - TIGRFAMs: TIGR01983
Pfam domain/function: PF08241 Methyltransf_11
EC number: =2.1.1.64
Molecular weight: Translated: 25448; Mature: 25317
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNADPHELQKFSDLAHRWWDPNAEFKPLHELNPVRLKWIDSHAHLTGKRVLDIGCGGGI CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCHH LSESMATLGADVKGIDLSNEALGVADLHSLESGVTVNYEEIAAETLAAREPASFDVATCM HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCEECHHHHHHHHHHHCCCCCCCHHHHH EMLEHVPDPSKVVEACKTLVKPGGWVFFSTLNRNVKSYLFAVIGAEYVARMLPKGTHDYA HHHHHCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RFIRPSELAGFARAAGLLTADIKGITYNPLTRDFGLSSDTDVNYMLACRREA HHCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure TNADPHELQKFSDLAHRWWDPNAEFKPLHELNPVRLKWIDSHAHLTGKRVLDIGCGGGI CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCHH LSESMATLGADVKGIDLSNEALGVADLHSLESGVTVNYEEIAAETLAAREPASFDVATCM HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCEECHHHHHHHHHHHCCCCCCCHHHHH EMLEHVPDPSKVVEACKTLVKPGGWVFFSTLNRNVKSYLFAVIGAEYVARMLPKGTHDYA HHHHHCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RFIRPSELAGFARAAGLLTADIKGITYNPLTRDFGLSSDTDVNYMLACRREA HHCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA