Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is ubiG

Identifier: 186475501

GI number: 186475501

Start: 829938

End: 830636

Strand: Reverse

Name: ubiG

Synonym: Bphy_0736

Alternate gene names: 186475501

Gene position: 830636-829938 (Counterclockwise)

Preceding gene: 186475502

Following gene: 186475500

Centisome position: 23.87

GC content: 60.37

Gene sequence:

>699_bases
ATGACCAACGCCGATCCCCACGAACTGCAGAAATTCAGCGATCTCGCGCATCGCTGGTGGGACCCGAATGCTGAGTTCAA
ACCTCTGCACGAACTGAATCCCGTTCGGCTCAAATGGATCGACTCCCATGCGCACCTCACAGGCAAGCGCGTGCTCGACA
TCGGGTGCGGCGGCGGCATTTTGTCCGAGTCGATGGCGACCTTGGGTGCTGACGTGAAGGGAATTGACCTGTCCAATGAG
GCGTTGGGCGTCGCAGATCTTCACAGCCTTGAAAGCGGTGTAACCGTAAATTACGAGGAAATCGCGGCGGAGACGCTGGC
GGCCCGTGAACCGGCCTCTTTCGACGTTGCCACATGCATGGAAATGCTCGAGCACGTGCCGGATCCGTCGAAGGTCGTCG
AGGCTTGCAAGACGCTCGTCAAGCCTGGCGGATGGGTGTTCTTTTCAACGCTCAACCGCAATGTGAAGTCATATCTGTTT
GCCGTGATCGGTGCCGAGTACGTCGCGCGCATGCTGCCGAAGGGCACGCACGATTACGCCCGCTTCATCCGCCCGTCGGA
GCTCGCGGGCTTCGCACGCGCGGCGGGTTTGCTGACCGCGGATATCAAGGGCATCACCTACAACCCGCTGACGCGCGATT
TCGGCCTGTCGAGCGACACCGATGTGAACTACATGCTCGCGTGCCGCCGCGAAGCCTGA

Upstream 100 bases:

>100_bases
CGTCCGTGACCCGTCGCTTTTGCCCGCGCGTGCACACCTCTATATACTCAGGGTTTGTCCGATCCACCCCGCTCTTCCTG
CCCTCGAGGCCGTATTCGTC

Downstream 100 bases:

>100_bases
TCCATTTTTTTGCGCCCGATTAACTGCATCTACTTCAATGAGCGATCCCACGCCCCTGCCTCAGCGCGAAGACGAAGAAG
CATCGATCGGCCTTTGCCAG

Product: 3-demethylubiquinone-9 3-methyltransferase

Products: NA

Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MTNADPHELQKFSDLAHRWWDPNAEFKPLHELNPVRLKWIDSHAHLTGKRVLDIGCGGGILSESMATLGADVKGIDLSNE
ALGVADLHSLESGVTVNYEEIAAETLAAREPASFDVATCMEMLEHVPDPSKVVEACKTLVKPGGWVFFSTLNRNVKSYLF
AVIGAEYVARMLPKGTHDYARFIRPSELAGFARAAGLLTADIKGITYNPLTRDFGLSSDTDVNYMLACRREA

Sequences:

>Translated_232_residues
MTNADPHELQKFSDLAHRWWDPNAEFKPLHELNPVRLKWIDSHAHLTGKRVLDIGCGGGILSESMATLGADVKGIDLSNE
ALGVADLHSLESGVTVNYEEIAAETLAAREPASFDVATCMEMLEHVPDPSKVVEACKTLVKPGGWVFFSTLNRNVKSYLF
AVIGAEYVARMLPKGTHDYARFIRPSELAGFARAAGLLTADIKGITYNPLTRDFGLSSDTDVNYMLACRREA
>Mature_231_residues
TNADPHELQKFSDLAHRWWDPNAEFKPLHELNPVRLKWIDSHAHLTGKRVLDIGCGGGILSESMATLGADVKGIDLSNEA
LGVADLHSLESGVTVNYEEIAAETLAAREPASFDVATCMEMLEHVPDPSKVVEACKTLVKPGGWVFFSTLNRNVKSYLFA
VIGAEYVARMLPKGTHDYARFIRPSELAGFARAAGLLTADIKGITYNPLTRDFGLSSDTDVNYMLACRREA

Specific function: Ubiquinone biosynthesis. [C]

COG id: COG2227

COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family

Homologues:

Organism=Homo sapiens, GI118600965, Length=238, Percent_Identity=33.6134453781513, Blast_Score=155, Evalue=3e-38,
Organism=Escherichia coli, GI1788564, Length=230, Percent_Identity=56.5217391304348, Blast_Score=267, Evalue=5e-73,
Organism=Caenorhabditis elegans, GI115533050, Length=234, Percent_Identity=31.1965811965812, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6324476, Length=282, Percent_Identity=30.1418439716312, Blast_Score=122, Evalue=4e-29,
Organism=Drosophila melanogaster, GI281365311, Length=244, Percent_Identity=29.5081967213115, Blast_Score=123, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24585589, Length=232, Percent_Identity=29.7413793103448, Blast_Score=120, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UBIG_BURP8 (B2JEZ6)

Other databases:

- EMBL:   CP001043
- RefSeq:   YP_001856971.1
- ProteinModelPortal:   B2JEZ6
- SMR:   B2JEZ6
- GeneID:   6242234
- GenomeReviews:   CP001043_GR
- KEGG:   bph:Bphy_0736
- HOGENOM:   HBG738842
- OMA:   DHAEIAK
- ProtClustDB:   PRK05134
- HAMAP:   MF_00472
- InterPro:   IPR013216
- InterPro:   IPR010233
- TIGRFAMs:   TIGR01983

Pfam domain/function: PF08241 Methyltransf_11

EC number: =2.1.1.64

Molecular weight: Translated: 25448; Mature: 25317

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNADPHELQKFSDLAHRWWDPNAEFKPLHELNPVRLKWIDSHAHLTGKRVLDIGCGGGI
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCHH
LSESMATLGADVKGIDLSNEALGVADLHSLESGVTVNYEEIAAETLAAREPASFDVATCM
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCEECHHHHHHHHHHHCCCCCCCHHHHH
EMLEHVPDPSKVVEACKTLVKPGGWVFFSTLNRNVKSYLFAVIGAEYVARMLPKGTHDYA
HHHHHCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RFIRPSELAGFARAAGLLTADIKGITYNPLTRDFGLSSDTDVNYMLACRREA
HHCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure 
TNADPHELQKFSDLAHRWWDPNAEFKPLHELNPVRLKWIDSHAHLTGKRVLDIGCGGGI
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCHH
LSESMATLGADVKGIDLSNEALGVADLHSLESGVTVNYEEIAAETLAAREPASFDVATCM
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCEECHHHHHHHHHHHCCCCCCCHHHHH
EMLEHVPDPSKVVEACKTLVKPGGWVFFSTLNRNVKSYLFAVIGAEYVARMLPKGTHDYA
HHHHHCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RFIRPSELAGFARAAGLLTADIKGITYNPLTRDFGLSSDTDVNYMLACRREA
HHCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA