| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is plsY
Identifier: 186475294
GI number: 186475294
Start: 597994
End: 598626
Strand: Direct
Name: plsY
Synonym: Bphy_0526
Alternate gene names: 186475294
Gene position: 597994-598626 (Clockwise)
Preceding gene: 186475293
Following gene: 186475296
Centisome position: 17.19
GC content: 62.56
Gene sequence:
>633_bases ATGGAAAACCTGATTGTCGCCGTCGTGGCCTATCTGATCGGCTCGGTGTCGTTTGCCGTGATCGTCAGCGCCGCGATGGG ATTAGCCGACCCGCGCTCGTACGGCTCGAAGAATCCCGGGGCGACGAACGTGCTGCGCAGCGGCAACAAGAAGGCCGCCA TTCTGACGCTCATTGGCGACGCGTTCAAAGGCTGGCTGGCCGTATGGTTGACGGGGCATTTCTCCGCGCATTTCGGGCTC GACGACACATCCGTCGCGATTGCCGCAATCGCCGTATTTCTCGGGCACCTGTATCCGGTCTTCTTCCGCTTCAAGGGCGG CAAGGGCGTCGCGACGGCTGCGGGCGTGCTGCTCGCCATCAATCCCATTCTCGGTATCGCGACGCTCCTGACCTGGCTGA TCGTCGCGTTCTTCACGCGCTACTCGTCGCTGGCTGCGCTGTGCGCGGCGATCTTCGCGCCGCTGTTCGACGGCTTTCTG TTTGGCGCGAATGTGATCGCGTTGTCCATCGTCGCGATGAGCGCACTGCTGATCTGGCGTCATCGCGCGAACATCGCGAA GCTGGTGGCGGGGCAGGAAAGCCGCATCGGCGACAAGAAGAAAGCCGAAGCGGCGGCTTCGCACAAGCATTGA
Upstream 100 bases:
>100_bases GTTCGGTAGAATGTGCGCCGTTGTGCCAGCGCGGCGTGCGCGCGGCACATGGAGACGGGCGCCGCCCGATGCGCTTTCCG ATACTGACAAGAGTTTCAAC
Downstream 100 bases:
>100_bases GCCGCGAAGGTCGACGCGAACGCGCGTCATCGCTATGTCATGCGCGGGCCGGTGAGTCGCGCATGACGGCGGACATCAAT CGCGGAAGTTGTTGAAGTCG
Product: putative glycerol-3-phosphate acyltransferase PlsY
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MENLIVAVVAYLIGSVSFAVIVSAAMGLADPRSYGSKNPGATNVLRSGNKKAAILTLIGDAFKGWLAVWLTGHFSAHFGL DDTSVAIAAIAVFLGHLYPVFFRFKGGKGVATAAGVLLAINPILGIATLLTWLIVAFFTRYSSLAALCAAIFAPLFDGFL FGANVIALSIVAMSALLIWRHRANIAKLVAGQESRIGDKKKAEAAASHKH
Sequences:
>Translated_210_residues MENLIVAVVAYLIGSVSFAVIVSAAMGLADPRSYGSKNPGATNVLRSGNKKAAILTLIGDAFKGWLAVWLTGHFSAHFGL DDTSVAIAAIAVFLGHLYPVFFRFKGGKGVATAAGVLLAINPILGIATLLTWLIVAFFTRYSSLAALCAAIFAPLFDGFL FGANVIALSIVAMSALLIWRHRANIAKLVAGQESRIGDKKKAEAAASHKH >Mature_210_residues MENLIVAVVAYLIGSVSFAVIVSAAMGLADPRSYGSKNPGATNVLRSGNKKAAILTLIGDAFKGWLAVWLTGHFSAHFGL DDTSVAIAAIAVFLGHLYPVFFRFKGGKGVATAAGVLLAINPILGIATLLTWLIVAFFTRYSSLAALCAAIFAPLFDGFL FGANVIALSIVAMSALLIWRHRANIAKLVAGQESRIGDKKKAEAAASHKH
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family
Homologues:
Organism=Escherichia coli, GI1789439, Length=196, Percent_Identity=43.3673469387755, Blast_Score=137, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PLSY_BURP8 (B2JDU2)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001856764.1 - GeneID: 6242027 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_0526 - HOGENOM: HBG734487 - OMA: SRIGEKK - ProtClustDB: PRK00220 - HAMAP: MF_01043 - InterPro: IPR003811 - TIGRFAMs: TIGR00023
Pfam domain/function: PF02660 DUF205
EC number: NA
Molecular weight: Translated: 22040; Mature: 22040
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1b854930)-; HASH(0x1c56970c)-; HASH(0x1c4e819c)-; HASH(0x1bfe9b9c)-; HASH(0x1c48505c)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENLIVAVVAYLIGSVSFAVIVSAAMGLADPRSYGSKNPGATNVLRSGNKKAAILTLIGD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHCCCCCEEHHHHHHH AFKGWLAVWLTGHFSAHFGLDDTSVAIAAIAVFLGHLYPVFFRFKGGKGVATAAGVLLAI HHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH NPILGIATLLTWLIVAFFTRYSSLAALCAAIFAPLFDGFLFGANVIALSIVAMSALLIWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRANIAKLVAGQESRIGDKKKAEAAASHKH HHHHHHHHHCCCHHHCCCHHHHHHHHCCCH >Mature Secondary Structure MENLIVAVVAYLIGSVSFAVIVSAAMGLADPRSYGSKNPGATNVLRSGNKKAAILTLIGD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHCCCCCEEHHHHHHH AFKGWLAVWLTGHFSAHFGLDDTSVAIAAIAVFLGHLYPVFFRFKGGKGVATAAGVLLAI HHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH NPILGIATLLTWLIVAFFTRYSSLAALCAAIFAPLFDGFLFGANVIALSIVAMSALLIWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRANIAKLVAGQESRIGDKKKAEAAASHKH HHHHHHHHHCCCHHHCCCHHHHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA