| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is murB
Identifier: 186475296
GI number: 186475296
Start: 599359
End: 600399
Strand: Direct
Name: murB
Synonym: Bphy_0528
Alternate gene names: 186475296
Gene position: 599359-600399 (Clockwise)
Preceding gene: 186475294
Following gene: 186475298
Centisome position: 17.23
GC content: 67.34
Gene sequence:
>1041_bases ATGTCCCAGCCCGAATCGCTTCCGTTTATCGCCGACTTCCCGCTCAAGCCGCACAACACCTTCGGTTTCGATGTGCGCGC GAGGCTCGCGTGTCGGATCGAAACCGACGCGCAGCTGCTCGCCGCCTTGCGCGATCCGCGCGCCGCGGGCTTGCGACGGC TCGTGCTGGGCGGCGGCAGCAACGTCGTGCTGACGGGCGATTTCGACGGACTCGTGTTGCTGGTCGCGCTGCGCGGTCGC AAGGTCGTTCGCGAAGACGACGAAGCGTGGTACGTCGAAGCGGCTGCGGGCGAGAACTGGCACGAGTTCGTATCGTGGAC CCTTGCAGAGGGCATGCCCGGTCTCGAGAATCTCGCGCTGATTCCGGGCACGGTGGGCGCGGCGCCGATCCAGAACATCG GCGCGTACGGGCTGGAGATGTGCGAGCGCTTTGCGTCGCTGCGCGCGGTCGAGCTGGCGACGGGCAAACTCGTCGAACTG GGCGCGGGCGCTTGCCGCTTCGGCTATCGCGACAGCTTCTTCAAACAGGAAGGCCGCGAGCGCTTCGTCATCGTGTCGGT GACGTTCAGATTGCCGAAGGTTTGGGCGCCGCGCGCCGGTTACACGGATATCGCGCGCCAACTCGCCGCCGTCGGTCTGG GCGACGCGACGCCGACACCGCAAGCCATCTTCGATGCCGTCGTCGCCGTGCGGCGCGCCAAGCTGCCGGATCCGTTCGTG CTCGGCAATGCGGGTAGCTTCTTCAAGAATCCTGTGGTCGAATCGGCGCAGTTCGATGCGCTCGCCGCGAAGGAACCGGA GATCGTCTCGTATCGGCAGGCGGATGGGCGCGTGAAGCTCGCAGCGGGCTGGCTCATCGACCGTTGCGGCTGGAAAGGGC GGACGTTGGGCGCGGCGGGCGTGCATGAGCGGCAGGCGCTCGTGCTCGTGAATCGCGGCGGCGCGAGTGGAACCGAGGTG CTGGCACTGGCGAAGGCGATCCAGCAGGACGTCGCGCAGCGCTTCGGCGTGGAGCTGGAGGCCGAACCCGTCTGTCTGTG A
Upstream 100 bases:
>100_bases ACCGGTGTCATTTTACCGACGCCTTTCTCGTTTGCCCAAGACTCGCGAGCGGCTTCGTTCCCGCGTCGCAGTTTCTGCCG GGCGCTTGCCAGAACATCCG
Downstream 100 bases:
>100_bases ACGGATTCCGCCGTCGGACAGCGACGCGAGCCTGAAAACAAAAAGCGCCGGGTGTCGAACCCGGCGCTTATGTTTTGCGG ACGGCGCGCCCGTCCCGGTT
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MSQPESLPFIADFPLKPHNTFGFDVRARLACRIETDAQLLAALRDPRAAGLRRLVLGGGSNVVLTGDFDGLVLLVALRGR KVVREDDEAWYVEAAAGENWHEFVSWTLAEGMPGLENLALIPGTVGAAPIQNIGAYGLEMCERFASLRAVELATGKLVEL GAGACRFGYRDSFFKQEGRERFVIVSVTFRLPKVWAPRAGYTDIARQLAAVGLGDATPTPQAIFDAVVAVRRAKLPDPFV LGNAGSFFKNPVVESAQFDALAAKEPEIVSYRQADGRVKLAAGWLIDRCGWKGRTLGAAGVHERQALVLVNRGGASGTEV LALAKAIQQDVAQRFGVELEAEPVCL
Sequences:
>Translated_346_residues MSQPESLPFIADFPLKPHNTFGFDVRARLACRIETDAQLLAALRDPRAAGLRRLVLGGGSNVVLTGDFDGLVLLVALRGR KVVREDDEAWYVEAAAGENWHEFVSWTLAEGMPGLENLALIPGTVGAAPIQNIGAYGLEMCERFASLRAVELATGKLVEL GAGACRFGYRDSFFKQEGRERFVIVSVTFRLPKVWAPRAGYTDIARQLAAVGLGDATPTPQAIFDAVVAVRRAKLPDPFV LGNAGSFFKNPVVESAQFDALAAKEPEIVSYRQADGRVKLAAGWLIDRCGWKGRTLGAAGVHERQALVLVNRGGASGTEV LALAKAIQQDVAQRFGVELEAEPVCL >Mature_345_residues SQPESLPFIADFPLKPHNTFGFDVRARLACRIETDAQLLAALRDPRAAGLRRLVLGGGSNVVLTGDFDGLVLLVALRGRK VVREDDEAWYVEAAAGENWHEFVSWTLAEGMPGLENLALIPGTVGAAPIQNIGAYGLEMCERFASLRAVELATGKLVELG AGACRFGYRDSFFKQEGRERFVIVSVTFRLPKVWAPRAGYTDIARQLAAVGLGDATPTPQAIFDAVVAVRRAKLPDPFVL GNAGSFFKNPVVESAQFDALAAKEPEIVSYRQADGRVKLAAGWLIDRCGWKGRTLGAAGVHERQALVLVNRGGASGTEVL ALAKAIQQDVAQRFGVELEAEPVCL
Specific function: Cell wall formation
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain
Homologues:
Organism=Escherichia coli, GI1790407, Length=331, Percent_Identity=51.963746223565, Blast_Score=326, Evalue=1e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURB_BURP8 (B2JDU4)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001856766.1 - ProteinModelPortal: B2JDU4 - SMR: B2JDU4 - GeneID: 6242029 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_0528 - HOGENOM: HBG686573 - OMA: GAAPMQN - ProtClustDB: PRK00046 - GO: GO:0005737 - HAMAP: MF_00037 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 - Gene3D: G3DSA:3.30.465.10 - Gene3D: G3DSA:3.30.43.10 - Gene3D: G3DSA:3.90.78.10 - PANTHER: PTHR21071 - TIGRFAMs: TIGR00179
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C; SSF56176 FAD-binding_2; SSF56194 MurB_C
EC number: =1.1.1.158
Molecular weight: Translated: 37270; Mature: 37139
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS51387 FAD_PCMH
Important sites: ACT_SITE 170-170 ACT_SITE 246-246 ACT_SITE 342-342
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPESLPFIADFPLKPHNTFGFDVRARLACRIETDAQLLAALRDPRAAGLRRLVLGGGS CCCCCCCCEEEECCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHCCHHHHHEEEEEECCC NVVLTGDFDGLVLLVALRGRKVVREDDEAWYVEAAAGENWHEFVSWTLAEGMPGLENLAL CEEEEECCCCEEEEEEHHCCHHEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEE IPGTVGAAPIQNIGAYGLEMCERFASLRAVELATGKLVELGAGACRFGYRDSFFKQEGRE CCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCEEECCCCCCCCCCCHHHHHHCCCC RFVIVSVTFRLPKVWAPRAGYTDIARQLAAVGLGDATPTPQAIFDAVVAVRRAKLPDPFV EEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEE LGNAGSFFKNPVVESAQFDALAAKEPEIVSYRQADGRVKLAAGWLIDRCGWKGRTLGAAG ECCCCCHHCCCCCCCCCCCHHCCCCCCCEEEECCCCEEEEEECHHHHHCCCCCCCCCCCC VHERQALVLVNRGGASGTEVLALAKAIQQDVAQRFGVELEAEPVCL CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCC >Mature Secondary Structure SQPESLPFIADFPLKPHNTFGFDVRARLACRIETDAQLLAALRDPRAAGLRRLVLGGGS CCCCCCCEEEECCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHCCHHHHHEEEEEECCC NVVLTGDFDGLVLLVALRGRKVVREDDEAWYVEAAAGENWHEFVSWTLAEGMPGLENLAL CEEEEECCCCEEEEEEHHCCHHEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEE IPGTVGAAPIQNIGAYGLEMCERFASLRAVELATGKLVELGAGACRFGYRDSFFKQEGRE CCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCEEECCCCCCCCCCCHHHHHHCCCC RFVIVSVTFRLPKVWAPRAGYTDIARQLAAVGLGDATPTPQAIFDAVVAVRRAKLPDPFV EEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEE LGNAGSFFKNPVVESAQFDALAAKEPEIVSYRQADGRVKLAAGWLIDRCGWKGRTLGAAG ECCCCCHHCCCCCCCCCCCHHCCCCCCCEEEECCCCEEEEEECHHHHHCCCCCCCCCCCC VHERQALVLVNRGGASGTEVLALAKAIQQDVAQRFGVELEAEPVCL CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA