| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is cbbA [H]
Identifier: 186475229
GI number: 186475229
Start: 523822
End: 524886
Strand: Direct
Name: cbbA [H]
Synonym: Bphy_0461
Alternate gene names: 186475229
Gene position: 523822-524886 (Clockwise)
Preceding gene: 186475228
Following gene: 186475230
Centisome position: 15.06
GC content: 61.41
Gene sequence:
>1065_bases ATGCCTCTCGTATCAATGCGTCAACTGCTGGACCATGCCGCCGAAAACGGTTATGGCCTTCCGGCATTCAACGTGAACAA CCTGGAGCAGGTGCAGGCCATCATGGCGGCGGCGGATCAGGTCAATGCGCCCGTGATCATGCAGGCTTCGGCAGGCGCGC GTAAGTATGCGGGCGAGCCGTTCCTGCGCCATCTGATCGAAGCGGCTATCGAGTCCTATCCGCACATTCCCGTCGTGATG CACCAGGACCACGGCCAGTCGCCGGCAGTCTGCATGGCCGCGATCCGCAGCGGCTTCACGAGCGTAATGATGGACGGCTC GCTGGAAGCCGACGGCAAGACGGTGGCGTCGTACGAGTACAACGTCGATGTGTCGCGCAAGGTCGTCGAGGCGGCGCATT CGATCGGCGTGACGGTTGAAGCGGAACTGGGTGTGCTCGGTTCGCTGGAAACGATGAAGGGCGACAAGGAAGACGGCCAC GGCGCGGAAGGCACGATGACGCGCGAGCAGCTGCTGACCGACGTCGAACAGGCAGCGGACTTCGTGAAGCTCACGCAGTG CGACGCACTCGCCATTGCAATCGGCACGTCGCATGGCGCGTACAAATTCTCGAAGAAGCCGACGGGCGATATCCTGTCGA TCCAGCGTATCCGCGAGATTCACGAGCGTATTCCGAACACGCACCTGGTGATGCACGGCTCGTCATCGGTGCCGCAGGAA CTGCTCGCTGAAATCCGCGAATTCGGCGGCGACATGAAGGAAACCTACGGCGTGCCCGTCGAGGAAATCCAGATCGGCAT CAAGCATGGCGTGCGCAAGATCAACATCGACACCGATCTGCGTCTTGCCATCACGGGCGCGATTCGCCGCTACCTGGCGG AAAATCCGTCGAAGTTCGATCCGCGCGACTACCTGAAGCCGGCTCGCGAAGCCGCGAAGAAGGTCTGCGTGGATCGTTAT CTGGCGTTCGGTTGCGAAGGCCAGGCGTCGAAGATCAAGCCGGTCTCGCTGGACAAGATCGCTGAGAAGTACAAGGCGGG CGAGCTCGCGCAGGTCGTTCGCTAA
Upstream 100 bases:
>100_bases GCATGCGCGCGGGACACGGTCTGCTTCACGATAAAATTGCACGAAATTGCACAAAAAGATGCCGTCGGCACAGATTTCGT TTCAATCTATGGAGTAATCA
Downstream 100 bases:
>100_bases GCAGTTGTTGCGCACGCACCTGGCCATCCGGCCAGGTTGTCGTCAGATCGCCGTTCCCGCATGATCCGGGGAACGGCGTT TCCCTTTTGTTCCGGGCGGT
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MPLVSMRQLLDHAAENGYGLPAFNVNNLEQVQAIMAAADQVNAPVIMQASAGARKYAGEPFLRHLIEAAIESYPHIPVVM HQDHGQSPAVCMAAIRSGFTSVMMDGSLEADGKTVASYEYNVDVSRKVVEAAHSIGVTVEAELGVLGSLETMKGDKEDGH GAEGTMTREQLLTDVEQAADFVKLTQCDALAIAIGTSHGAYKFSKKPTGDILSIQRIREIHERIPNTHLVMHGSSSVPQE LLAEIREFGGDMKETYGVPVEEIQIGIKHGVRKINIDTDLRLAITGAIRRYLAENPSKFDPRDYLKPAREAAKKVCVDRY LAFGCEGQASKIKPVSLDKIAEKYKAGELAQVVR
Sequences:
>Translated_354_residues MPLVSMRQLLDHAAENGYGLPAFNVNNLEQVQAIMAAADQVNAPVIMQASAGARKYAGEPFLRHLIEAAIESYPHIPVVM HQDHGQSPAVCMAAIRSGFTSVMMDGSLEADGKTVASYEYNVDVSRKVVEAAHSIGVTVEAELGVLGSLETMKGDKEDGH GAEGTMTREQLLTDVEQAADFVKLTQCDALAIAIGTSHGAYKFSKKPTGDILSIQRIREIHERIPNTHLVMHGSSSVPQE LLAEIREFGGDMKETYGVPVEEIQIGIKHGVRKINIDTDLRLAITGAIRRYLAENPSKFDPRDYLKPAREAAKKVCVDRY LAFGCEGQASKIKPVSLDKIAEKYKAGELAQVVR >Mature_353_residues PLVSMRQLLDHAAENGYGLPAFNVNNLEQVQAIMAAADQVNAPVIMQASAGARKYAGEPFLRHLIEAAIESYPHIPVVMH QDHGQSPAVCMAAIRSGFTSVMMDGSLEADGKTVASYEYNVDVSRKVVEAAHSIGVTVEAELGVLGSLETMKGDKEDGHG AEGTMTREQLLTDVEQAADFVKLTQCDALAIAIGTSHGAYKFSKKPTGDILSIQRIREIHERIPNTHLVMHGSSSVPQEL LAEIREFGGDMKETYGVPVEEIQIGIKHGVRKINIDTDLRLAITGAIRRYLAENPSKFDPRDYLKPAREAAKKVCVDRYL AFGCEGQASKIKPVSLDKIAEKYKAGELAQVVR
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI87082041, Length=329, Percent_Identity=34.6504559270517, Blast_Score=172, Evalue=3e-44, Organism=Escherichia coli, GI1789526, Length=331, Percent_Identity=33.8368580060423, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI1788072, Length=329, Percent_Identity=29.1793313069909, Blast_Score=118, Evalue=6e-28, Organism=Escherichia coli, GI1789293, Length=354, Percent_Identity=24.5762711864407, Blast_Score=81, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006412 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38536; Mature: 38404
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVSMRQLLDHAAENGYGLPAFNVNNLEQVQAIMAAADQVNAPVIMQASAGARKYAGEP CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHCCCCH FLRHLIEAAIESYPHIPVVMHQDHGQSPAVCMAAIRSGFTSVMMDGSLEADGKTVASYEY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCHHHHHCCCCCCCCCCEEEEEEE NVDVSRKVVEAAHSIGVTVEAELGVLGSLETMKGDKEDGHGAEGTMTREQLLTDVEQAAD CCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH FVKLTQCDALAIAIGTSHGAYKFSKKPTGDILSIQRIREIHERIPNTHLVMHGSSSVPQE HHHHHCCCEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH LLAEIREFGGDMKETYGVPVEEIQIGIKHGVRKINIDTDLRLAITGAIRRYLAENPSKFD HHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCC PRDYLKPAREAAKKVCVDRYLAFGCEGQASKIKPVSLDKIAEKYKAGELAQVVR CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCC >Mature Secondary Structure PLVSMRQLLDHAAENGYGLPAFNVNNLEQVQAIMAAADQVNAPVIMQASAGARKYAGEP CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHCCCCH FLRHLIEAAIESYPHIPVVMHQDHGQSPAVCMAAIRSGFTSVMMDGSLEADGKTVASYEY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCHHHHHCCCCCCCCCCEEEEEEE NVDVSRKVVEAAHSIGVTVEAELGVLGSLETMKGDKEDGHGAEGTMTREQLLTDVEQAAD CCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH FVKLTQCDALAIAIGTSHGAYKFSKKPTGDILSIQRIREIHERIPNTHLVMHGSSSVPQE HHHHHCCCEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH LLAEIREFGGDMKETYGVPVEEIQIGIKHGVRKINIDTDLRLAITGAIRRYLAENPSKFD HHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCC PRDYLKPAREAAKKVCVDRYLAFGCEGQASKIKPVSLDKIAEKYKAGELAQVVR CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8550527 [H]