| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is pykA [H]
Identifier: 186475228
GI number: 186475228
Start: 522131
End: 523567
Strand: Direct
Name: pykA [H]
Synonym: Bphy_0460
Alternate gene names: 186475228
Gene position: 522131-523567 (Clockwise)
Preceding gene: 186475227
Following gene: 186475229
Centisome position: 15.01
GC content: 64.65
Gene sequence:
>1437_bases ATGCATCGCGCCACCAAGATTGTCGCAACCATCGGACCCGCTTCCAGCACGCAGGACATCCTGCTGCAGATGATTCAGGC GGGCGCCGACGTGGTGCGTCTCAACTTCTCGCACGGCACCGCCGACGACCATCGTCAACGCGCGGAGTTCGTACGTGAAG CGGCCCGGCAGGCAGGCCGCGAGGTCGGCATCATGGCCGATCTGCAAGGCCCGAAAATCCGTGTCGGCAAGTTCGAAAAC GGCAAGACCACGCTGATCGCCGGCAACACCTTCATCCTCGACGCCGACTGCGAACTCGGCAACGACGACCGCGTCGGCCT CGATTACAAGGATCTGCCGCGCGACCTGCGAGCAGGCGACACGCTGCTTCTGAACGACGGCCTGATCGTGCTGACCGTGT CCCGCGTGATTGGCAACGAAATCCACACCGTCGTGAAGATCGGCGGCGACCTGTCGAACAACAAGGGCATCAACCGCCAG GGCGGCGGCCTGACGGCGCCGGCGCTGACCGCGAAGGACATGGAAGATATCCGCACGGCGATGTCGCTGGGTGCGGATTA TGTGGCCGTGTCGTTCCCGAAGAATGCGACCGACATGGAGATGGCGCGCCAGCTCGCGAATATCGCGGGCGCGCCATACG GCATCAAGCCGAAGATGATCGCGAAGATCGAGCGCGCCGAAGCAATTCCGGCGCTGCAAGGCATTCTCGAGGCATCGGAC GGCATCATGGTCGCGCGTGGCGATCTCGCCGTCGAAGTCGGCAACGCGGCCGTGCCTGCGCTGCAAAAGCGCATGATCAA GATGGCGCGCGACATGAACAAGTTCGTGATCACGGCCACGCAGATGATGGAGTCGATGATCCACGCGCCCGTGCCGACCC GTGCGGAAGTGTCGGACGTCGCAAACGCGGTGCTGGACGGCACGGATGCAGTGATGCTGTCGGCGGAATCGGCGGCGGGC AAGTACCCGGTGCAGACCATCGAGACGATGGCTGCCATCTGCGTCGAAGCCGAAAAGTCCGAGCACGTCGAGCTGGACAA GGATTTCCTCGACCGCACGTTCACGCGCATCGACCAGTCGATCGCGATGGGCGCGCTCTTCACCGCGTATCACCTCGGTG CGAAGGCGATCGTCGCGTTGACGGAATCGGGCTCGACGGCGCTGTGGATGTCGCGTCACTGGACGCACGTGCCCATCTTC GCGCTCACGCCCCGCACGGGCAGCGAGCGCGCGATGGCGATCTACCGCAATGTCACTCCGCTGCATCTGGATACCAGCAG CGATCGCGACATCGCGCTGGCGCAGGCGCTCGAAGTGGTGGTGGGCAAGGGCTATGCGGCGCGCGGCGACATGGTCGTGC TCACGGTCGGCGAGCCGATGGGCCAGGCGGGGGGTACGAACACGCTGAAGATCGTGCGCGTCGGCGAACCCGTCTGA
Upstream 100 bases:
>100_bases AACGAACGGCGCACCACCCCATGTAGCACCTGTCGTTGCGCAGCCTCCGCATCCGACTCCCAACGTTCATCCCAGCGATC CCATCCAGACGAGGAGACTC
Downstream 100 bases:
>100_bases CGCGAGCAGGCTGAGCCAGCCGAGCCAACTGTCAGCCGCCGCGAGAGCGAGTGGTAGCAAGCCGTTACGTTGAGTCAAGA ACGGCACAGCCGAACGGCAC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK-2 [H]
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MHRATKIVATIGPASSTQDILLQMIQAGADVVRLNFSHGTADDHRQRAEFVREAARQAGREVGIMADLQGPKIRVGKFEN GKTTLIAGNTFILDADCELGNDDRVGLDYKDLPRDLRAGDTLLLNDGLIVLTVSRVIGNEIHTVVKIGGDLSNNKGINRQ GGGLTAPALTAKDMEDIRTAMSLGADYVAVSFPKNATDMEMARQLANIAGAPYGIKPKMIAKIERAEAIPALQGILEASD GIMVARGDLAVEVGNAAVPALQKRMIKMARDMNKFVITATQMMESMIHAPVPTRAEVSDVANAVLDGTDAVMLSAESAAG KYPVQTIETMAAICVEAEKSEHVELDKDFLDRTFTRIDQSIAMGALFTAYHLGAKAIVALTESGSTALWMSRHWTHVPIF ALTPRTGSERAMAIYRNVTPLHLDTSSDRDIALAQALEVVVGKGYAARGDMVVLTVGEPMGQAGGTNTLKIVRVGEPV
Sequences:
>Translated_478_residues MHRATKIVATIGPASSTQDILLQMIQAGADVVRLNFSHGTADDHRQRAEFVREAARQAGREVGIMADLQGPKIRVGKFEN GKTTLIAGNTFILDADCELGNDDRVGLDYKDLPRDLRAGDTLLLNDGLIVLTVSRVIGNEIHTVVKIGGDLSNNKGINRQ GGGLTAPALTAKDMEDIRTAMSLGADYVAVSFPKNATDMEMARQLANIAGAPYGIKPKMIAKIERAEAIPALQGILEASD GIMVARGDLAVEVGNAAVPALQKRMIKMARDMNKFVITATQMMESMIHAPVPTRAEVSDVANAVLDGTDAVMLSAESAAG KYPVQTIETMAAICVEAEKSEHVELDKDFLDRTFTRIDQSIAMGALFTAYHLGAKAIVALTESGSTALWMSRHWTHVPIF ALTPRTGSERAMAIYRNVTPLHLDTSSDRDIALAQALEVVVGKGYAARGDMVVLTVGEPMGQAGGTNTLKIVRVGEPV >Mature_478_residues MHRATKIVATIGPASSTQDILLQMIQAGADVVRLNFSHGTADDHRQRAEFVREAARQAGREVGIMADLQGPKIRVGKFEN GKTTLIAGNTFILDADCELGNDDRVGLDYKDLPRDLRAGDTLLLNDGLIVLTVSRVIGNEIHTVVKIGGDLSNNKGINRQ GGGLTAPALTAKDMEDIRTAMSLGADYVAVSFPKNATDMEMARQLANIAGAPYGIKPKMIAKIERAEAIPALQGILEASD GIMVARGDLAVEVGNAAVPALQKRMIKMARDMNKFVITATQMMESMIHAPVPTRAEVSDVANAVLDGTDAVMLSAESAAG KYPVQTIETMAAICVEAEKSEHVELDKDFLDRTFTRIDQSIAMGALFTAYHLGAKAIVALTESGSTALWMSRHWTHVPIF ALTPRTGSERAMAIYRNVTPLHLDTSSDRDIALAQALEVVVGKGYAARGDMVVLTVGEPMGQAGGTNTLKIVRVGEPV
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=493, Percent_Identity=36.5111561866126, Blast_Score=276, Evalue=2e-74, Organism=Homo sapiens, GI33286420, Length=493, Percent_Identity=36.5111561866126, Blast_Score=276, Evalue=2e-74, Organism=Homo sapiens, GI33286418, Length=493, Percent_Identity=36.105476673428, Blast_Score=272, Evalue=5e-73, Organism=Homo sapiens, GI32967597, Length=496, Percent_Identity=36.8951612903226, Blast_Score=270, Evalue=3e-72, Organism=Homo sapiens, GI10835121, Length=496, Percent_Identity=36.8951612903226, Blast_Score=270, Evalue=3e-72, Organism=Homo sapiens, GI310128732, Length=291, Percent_Identity=36.0824742268041, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI310128730, Length=291, Percent_Identity=36.0824742268041, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI310128736, Length=239, Percent_Identity=33.0543933054393, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI310128734, Length=239, Percent_Identity=33.0543933054393, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI310128738, Length=218, Percent_Identity=31.651376146789, Blast_Score=101, Evalue=1e-21, Organism=Escherichia coli, GI1788160, Length=478, Percent_Identity=51.255230125523, Blast_Score=457, Evalue=1e-130, Organism=Escherichia coli, GI1787965, Length=468, Percent_Identity=39.5299145299145, Blast_Score=308, Evalue=7e-85, Organism=Caenorhabditis elegans, GI17544584, Length=489, Percent_Identity=36.8098159509202, Blast_Score=271, Evalue=6e-73, Organism=Caenorhabditis elegans, GI71984413, Length=487, Percent_Identity=36.9609856262834, Blast_Score=253, Evalue=1e-67, Organism=Caenorhabditis elegans, GI17506829, Length=487, Percent_Identity=36.9609856262834, Blast_Score=253, Evalue=2e-67, Organism=Caenorhabditis elegans, GI17506831, Length=487, Percent_Identity=36.9609856262834, Blast_Score=253, Evalue=2e-67, Organism=Caenorhabditis elegans, GI71984406, Length=487, Percent_Identity=36.9609856262834, Blast_Score=253, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6319279, Length=487, Percent_Identity=33.8809034907598, Blast_Score=244, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6324923, Length=489, Percent_Identity=34.7648261758691, Blast_Score=239, Evalue=1e-63, Organism=Drosophila melanogaster, GI24648964, Length=497, Percent_Identity=36.4185110663984, Blast_Score=262, Evalue=4e-70, Organism=Drosophila melanogaster, GI28571814, Length=497, Percent_Identity=36.4185110663984, Blast_Score=262, Evalue=4e-70, Organism=Drosophila melanogaster, GI24648966, Length=409, Percent_Identity=36.6748166259169, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI24581235, Length=489, Percent_Identity=30.879345603272, Blast_Score=212, Evalue=4e-55, Organism=Drosophila melanogaster, GI24646914, Length=270, Percent_Identity=36.2962962962963, Blast_Score=143, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51094; Mature: 51094
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRATKIVATIGPASSTQDILLQMIQAGADVVRLNFSHGTADDHRQRAEFVREAARQAGR CCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCC EVGIMADLQGPKIRVGKFENGKTTLIAGNTFILDADCELGNDDRVGLDYKDLPRDLRAGD EECEEEECCCCEEEEEEECCCCEEEEECCEEEEECCCCCCCCCCCCCCHHHCCHHHCCCC TLLLNDGLIVLTVSRVIGNEIHTVVKIGGDLSNNKGINRQGGGLTAPALTAKDMEDIRTA EEEEECCEEEEEEHHHHCCHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH MSLGADYVAVSFPKNATDMEMARQLANIAGAPYGIKPKMIAKIERAEAIPALQGILEASD HHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC GIMVARGDLAVEVGNAAVPALQKRMIKMARDMNKFVITATQMMESMIHAPVPTRAEVSDV CEEEEECCEEEEECCCHHHHHHHHHHHHHHCCHHHEEEHHHHHHHHHCCCCCCCHHHHHH ANAVLDGTDAVMLSAESAAGKYPVQTIETMAAICVEAEKSEHVELDKDFLDRTFTRIDQS HHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH IAMGALFTAYHLGAKAIVALTESGSTALWMSRHWTHVPIFALTPRTGSERAMAIYRNVTP HHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEECCCE LHLDTSSDRDIALAQALEVVVGKGYAARGDMVVLTVGEPMGQAGGTNTLKIVRVGEPV EEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure MHRATKIVATIGPASSTQDILLQMIQAGADVVRLNFSHGTADDHRQRAEFVREAARQAGR CCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCC EVGIMADLQGPKIRVGKFENGKTTLIAGNTFILDADCELGNDDRVGLDYKDLPRDLRAGD EECEEEECCCCEEEEEEECCCCEEEEECCEEEEECCCCCCCCCCCCCCHHHCCHHHCCCC TLLLNDGLIVLTVSRVIGNEIHTVVKIGGDLSNNKGINRQGGGLTAPALTAKDMEDIRTA EEEEECCEEEEEEHHHHCCHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH MSLGADYVAVSFPKNATDMEMARQLANIAGAPYGIKPKMIAKIERAEAIPALQGILEASD HHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC GIMVARGDLAVEVGNAAVPALQKRMIKMARDMNKFVITATQMMESMIHAPVPTRAEVSDV CEEEEECCEEEEECCCHHHHHHHHHHHHHHCCHHHEEEHHHHHHHHHCCCCCCCHHHHHH ANAVLDGTDAVMLSAESAAGKYPVQTIETMAAICVEAEKSEHVELDKDFLDRTFTRIDQS HHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH IAMGALFTAYHLGAKAIVALTESGSTALWMSRHWTHVPIFALTPRTGSERAMAIYRNVTP HHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEECCCE LHLDTSSDRDIALAQALEVVVGKGYAARGDMVVLTVGEPMGQAGGTNTLKIVRVGEPV EEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 1732206; 1859631; 8439398 [H]