| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186474968
Identifier: 186474968
GI number: 186474968
Start: 223414
End: 224157
Strand: Direct
Name: 186474968
Synonym: Bphy_0199
Alternate gene names: NA
Gene position: 223414-224157 (Clockwise)
Preceding gene: 186474967
Following gene: 186474969
Centisome position: 6.42
GC content: 70.03
Gene sequence:
>744_bases ATGACCGACAACCCCGGCTCGACGCCACCCTTTCCCGGATTTCCAGGTTTTCCACCCGCCGAAATGCTTGACCGCATGTG GGGCATGATGCGCCTCACGCCGTTCGGGGCGGCGTTTCCGGGCACGAGTCCGGGCTCGGCGCAGGGCTTCGTGCCGTCGC TGTCGATCATGTCCGACATGATGGCGCCGCTCACGAACGTCGAAGAGCTCGACAAGCGCATCACCGACATGCGCGCCGTC GAGCAGTGGCTCAAGCTCAATCTGAACATGCTGCAGTCGGCCATCCAGGCGCTCGAAGTGCAGCGCGCGACGCTCGCGAC GCTGCGCGCGTTCGGCGCGTTCGCGCAGCAATCGATGACACAGCCGGCCGCCGAAGCGCCGCAGAAGCAGCCCGAGCCGC CGCCTGCCGCGAGGACGCAGCAGGAAGCCGGCGATGCCGCCGAGTCGCCGCCACCGCCCACATTCGACGCGTCGGGCTGG TGGAACCTGCTGCAGGCGCAGTTCAATCAGCTCGCGCAATTCGCGATGGCGCAGCCGGCGGCGACCACGGCGACGGGCGC ATCGGAAGCGGGCGCGGGCGTCGAGCCAAGCGATCTCGAACCGGACGACGCCCCCGAGTCTGACACGGCCGGTGCCGCGC AAGCCGGAGCGGACGACGCGCCACGTCCGGCGGCGAAGCGCGCGCCCAGCGCGAAGCGTGCGGGCGGCGCGGCTGCAAAG AAGAGCTCGTCGACGCCCGAGTGA
Upstream 100 bases:
>100_bases TTCGCAAACAGTTCGCACGAAAAGGCTCGCGGTATCATCGAGCGTGAACTTCAAACATCCATAAACACACGGGCCAGAAC CGAACACAGGAGTCTCAGCA
Downstream 100 bases:
>100_bases CCGGGTAGCCGCGAACAAACGGGCGGGCGCAACGGCCGCCGCGCCCGACGCGCCGGCACCGCGCTTCGCACCTCCGCTTA GCACATCCGTTTGACACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTDNPGSTPPFPGFPGFPPAEMLDRMWGMMRLTPFGAAFPGTSPGSAQGFVPSLSIMSDMMAPLTNVEELDKRITDMRAV EQWLKLNLNMLQSAIQALEVQRATLATLRAFGAFAQQSMTQPAAEAPQKQPEPPPAARTQQEAGDAAESPPPPTFDASGW WNLLQAQFNQLAQFAMAQPAATTATGASEAGAGVEPSDLEPDDAPESDTAGAAQAGADDAPRPAAKRAPSAKRAGGAAAK KSSSTPE
Sequences:
>Translated_247_residues MTDNPGSTPPFPGFPGFPPAEMLDRMWGMMRLTPFGAAFPGTSPGSAQGFVPSLSIMSDMMAPLTNVEELDKRITDMRAV EQWLKLNLNMLQSAIQALEVQRATLATLRAFGAFAQQSMTQPAAEAPQKQPEPPPAARTQQEAGDAAESPPPPTFDASGW WNLLQAQFNQLAQFAMAQPAATTATGASEAGAGVEPSDLEPDDAPESDTAGAAQAGADDAPRPAAKRAPSAKRAGGAAAK KSSSTPE >Mature_246_residues TDNPGSTPPFPGFPGFPPAEMLDRMWGMMRLTPFGAAFPGTSPGSAQGFVPSLSIMSDMMAPLTNVEELDKRITDMRAVE QWLKLNLNMLQSAIQALEVQRATLATLRAFGAFAQQSMTQPAAEAPQKQPEPPPAARTQQEAGDAAESPPPPTFDASGWW NLLQAQFNQLAQFAMAQPAATTATGASEAGAGVEPSDLEPDDAPESDTAGAAQAGADDAPRPAAKRAPSAKRAGGAAAKK SSSTPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25735; Mature: 25604
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNPGSTPPFPGFPGFPPAEMLDRMWGMMRLTPFGAAFPGTSPGSAQGFVPSLSIMSDM CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH MAPLTNVEELDKRITDMRAVEQWLKLNLNMLQSAIQALEVQRATLATLRAFGAFAQQSMT HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QPAAEAPQKQPEPPPAARTQQEAGDAAESPPPPTFDASGWWNLLQAQFNQLAQFAMAQPA CHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC ATTATGASEAGAGVEPSDLEPDDAPESDTAGAAQAGADDAPRPAAKRAPSAKRAGGAAAK HHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCHHHHCCHHHH KSSSTPE CCCCCCC >Mature Secondary Structure TDNPGSTPPFPGFPGFPPAEMLDRMWGMMRLTPFGAAFPGTSPGSAQGFVPSLSIMSDM CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH MAPLTNVEELDKRITDMRAVEQWLKLNLNMLQSAIQALEVQRATLATLRAFGAFAQQSMT HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QPAAEAPQKQPEPPPAARTQQEAGDAAESPPPPTFDASGWWNLLQAQFNQLAQFAMAQPA CHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC ATTATGASEAGAGVEPSDLEPDDAPESDTAGAAQAGADDAPRPAAKRAPSAKRAGGAAAK HHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCHHHHCCHHHH KSSSTPE CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA