| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186474969
Identifier: 186474969
GI number: 186474969
Start: 224717
End: 225589
Strand: Direct
Name: 186474969
Synonym: Bphy_0200
Alternate gene names: NA
Gene position: 224717-225589 (Clockwise)
Preceding gene: 186474968
Following gene: 186474970
Centisome position: 6.46
GC content: 60.25
Gene sequence:
>873_bases ATGAACACCATGCTTTATCCGGAACTTTACAAATCGCTCGAATCCGTTCGATGGGACATGGAGAAGGACATTCCCTGGGA CAAATTCGACGGGTCGCTGCTCACCGACGAGCAGGCGGCGACCATCAAGATGAACGCGATCACCGAATGGTCGGCGCTGC CGGCCACGGAAATGTTCCTGCGCGACAACCACCACGACAGCGATTTCTCTGCATTCATGAGCGTGTGGTTCTTCGAGGAG CAGAAGCACTCACTGGTATTGATGGAGTATCTGCGCCGCTTCAAGCCGCACATGGTGCCGACGGAAGAAGAGCTGCACGC CGTGCGCTTCGAGTTCGATCCGGCGCCGCCGCTCGAAACGCTGATGCTGCACTTCTGCGGCGAAATCCGCCTGAACCACT GGTATCGCCGCGCGGCTGAGTGGCATACCGAGCCCGTCATCAAGGCGATCTACGAAACCATTTCGCGCGACGAAGCGCGT CATGGCGGCGCGTATCTGCGCTACATGAAGAAAGCGCTGACCAACTTCGGCGACGGCGCGCGCGCTGCATTCGCGAAGAT CGGCGTGTTGATGGCATCTGCGCGCCGCACGGAAAAGCCGCTGCACCCGACCAACCTGCACGTGAATCAGTCGCTGTTCC CGCGCGACACGGTTCAATCGCGTCTGCCCGATCCGGAATGGCTCGAGCGCTGGCTCGACGAGCAGATCTGTTTCGACGAC GGCTGGGAAAAGAAAGTGGTGGAGCGCATTCTGCACAACCTCTCCATCCTGTTCGAGCGCTCGTTCACGACGGCTCAGGA ATTGAACCGCTATCGCAAGGAAGTCGTGACGCGCCTGCAGGCCGAGCAGCAGCCTGCGCAGCAGCCGGCCTGA
Upstream 100 bases:
>100_bases GCGCTGACGACAGGGAAAGTTCCCGAAAGTTTCCGTGCGTCGGCAATACATTGGCAACAGACATAACAGACGTCGCTTTG CGCAGAACAGGGGTGGGATC
Downstream 100 bases:
>100_bases TGACGGCCGCGCGTCGCCGGGCGTGAAGCCCTGCGCCGCACAGAAACACGACGGCCCGGCTGGTGACAAACCGCCGGGCC GTTCTTCTTTTGTCACCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MNTMLYPELYKSLESVRWDMEKDIPWDKFDGSLLTDEQAATIKMNAITEWSALPATEMFLRDNHHDSDFSAFMSVWFFEE QKHSLVLMEYLRRFKPHMVPTEEELHAVRFEFDPAPPLETLMLHFCGEIRLNHWYRRAAEWHTEPVIKAIYETISRDEAR HGGAYLRYMKKALTNFGDGARAAFAKIGVLMASARRTEKPLHPTNLHVNQSLFPRDTVQSRLPDPEWLERWLDEQICFDD GWEKKVVERILHNLSILFERSFTTAQELNRYRKEVVTRLQAEQQPAQQPA
Sequences:
>Translated_290_residues MNTMLYPELYKSLESVRWDMEKDIPWDKFDGSLLTDEQAATIKMNAITEWSALPATEMFLRDNHHDSDFSAFMSVWFFEE QKHSLVLMEYLRRFKPHMVPTEEELHAVRFEFDPAPPLETLMLHFCGEIRLNHWYRRAAEWHTEPVIKAIYETISRDEAR HGGAYLRYMKKALTNFGDGARAAFAKIGVLMASARRTEKPLHPTNLHVNQSLFPRDTVQSRLPDPEWLERWLDEQICFDD GWEKKVVERILHNLSILFERSFTTAQELNRYRKEVVTRLQAEQQPAQQPA >Mature_290_residues MNTMLYPELYKSLESVRWDMEKDIPWDKFDGSLLTDEQAATIKMNAITEWSALPATEMFLRDNHHDSDFSAFMSVWFFEE QKHSLVLMEYLRRFKPHMVPTEEELHAVRFEFDPAPPLETLMLHFCGEIRLNHWYRRAAEWHTEPVIKAIYETISRDEAR HGGAYLRYMKKALTNFGDGARAAFAKIGVLMASARRTEKPLHPTNLHVNQSLFPRDTVQSRLPDPEWLERWLDEQICFDD GWEKKVVERILHNLSILFERSFTTAQELNRYRKEVVTRLQAEQQPAQQPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34270; Mature: 34270
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTMLYPELYKSLESVRWDMEKDIPWDKFDGSLLTDEQAATIKMNAITEWSALPATEMFL CCCCCCHHHHHHHHHHHCCHHCCCCCCCCCCCEECCCCCCEEEECCHHCCCCCCHHHHHH RDNHHDSDFSAFMSVWFFEEQKHSLVLMEYLRRFKPHMVPTEEELHAVRFEFDPAPPLET HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEECCCCCCHHH LMLHFCGEIRLNHWYRRAAEWHTEPVIKAIYETISRDEARHGGAYLRYMKKALTNFGDGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHH RAAFAKIGVLMASARRTEKPLHPTNLHVNQSLFPRDTVQSRLPDPEWLERWLDEQICFDD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCC GWEKKVVERILHNLSILFERSFTTAQELNRYRKEVVTRLQAEQQPAQQPA CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNTMLYPELYKSLESVRWDMEKDIPWDKFDGSLLTDEQAATIKMNAITEWSALPATEMFL CCCCCCHHHHHHHHHHHCCHHCCCCCCCCCCCEECCCCCCEEEECCHHCCCCCCHHHHHH RDNHHDSDFSAFMSVWFFEEQKHSLVLMEYLRRFKPHMVPTEEELHAVRFEFDPAPPLET HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEECCCCCCHHH LMLHFCGEIRLNHWYRRAAEWHTEPVIKAIYETISRDEARHGGAYLRYMKKALTNFGDGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHH RAAFAKIGVLMASARRTEKPLHPTNLHVNQSLFPRDTVQSRLPDPEWLERWLDEQICFDD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCC GWEKKVVERILHNLSILFERSFTTAQELNRYRKEVVTRLQAEQQPAQQPA CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA