| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186474936
Identifier: 186474936
GI number: 186474936
Start: 186570
End: 187172
Strand: Direct
Name: 186474936
Synonym: Bphy_0167
Alternate gene names: NA
Gene position: 186570-187172 (Clockwise)
Preceding gene: 186474929
Following gene: 186474938
Centisome position: 5.36
GC content: 65.51
Gene sequence:
>603_bases ATGTTTTCGTGCACCCGATCGATCTGGCCGCCGCGGCTCGTGACCGTGCCGGGCTTGCACGGCAGCGAAGGCGCGCATTG GCAAACGTGGCTCGAGCGTCAGTTTCCGCGTTCGTTGCGCGTCGAGCAGGCGGACTGGGACGCACCGAACCTTGGGCAAT GGGCGCAGGCCGTGCGGGACCTGCTGGCGCGCGAGCGCGGTCCGTTCGTGCTTGCCGCGCATAGTTTCGGCTGCCTTGCG ACTGCGCATGCGTTGCAGCAAGGCGTGCCGGCCGCCGATATTGCTGGCGTGCTATTCGTGGCGCCCGCGAGCCCGAAGAA GTTCGAGTATGCGGGTGCATTCGATGCGCGCCGTCTTGGCGTGCCTTCCATTCTGATCGGCAGCGAGACCGACCCGTGGA TGCCGCTTGCGGGCGCACGTGAACTAGCAACGCATCTGGGCAGCGCCTTCGTCAATCTTGGCGATGCGGGCCATATCAAC ACGGCGGCGGGCTATGGCCCTTGGCCTCGCGCGAAGTACCTGGTCGATACGCTTGCGCATTGCGCGGCGCCGCTGCGCTT CCAGGACGAAGGCGAGGAACTTGCTACGCAGGTATTCAGCTAA
Upstream 100 bases:
>100_bases GCGCGGTGGCACGGCGATATACAAAGCAGGAAAAATTGGTTCGGGGCAGGCGCCGCCCACGCGACAATGATTTCCAGGTT CCCCTAGCGAGAAAATAATC
Downstream 100 bases:
>100_bases CGCCGGTGGAGGGATGCCGCGACATCAGATCCAGTGAAAGCCCTTCGCGAGCATGCCCGCGAGCGCGAAGTTTGCTGCCC ACAGCAAACGGCATTCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MFSCTRSIWPPRLVTVPGLHGSEGAHWQTWLERQFPRSLRVEQADWDAPNLGQWAQAVRDLLARERGPFVLAAHSFGCLA TAHALQQGVPAADIAGVLFVAPASPKKFEYAGAFDARRLGVPSILIGSETDPWMPLAGARELATHLGSAFVNLGDAGHIN TAAGYGPWPRAKYLVDTLAHCAAPLRFQDEGEELATQVFS
Sequences:
>Translated_200_residues MFSCTRSIWPPRLVTVPGLHGSEGAHWQTWLERQFPRSLRVEQADWDAPNLGQWAQAVRDLLARERGPFVLAAHSFGCLA TAHALQQGVPAADIAGVLFVAPASPKKFEYAGAFDARRLGVPSILIGSETDPWMPLAGARELATHLGSAFVNLGDAGHIN TAAGYGPWPRAKYLVDTLAHCAAPLRFQDEGEELATQVFS >Mature_200_residues MFSCTRSIWPPRLVTVPGLHGSEGAHWQTWLERQFPRSLRVEQADWDAPNLGQWAQAVRDLLARERGPFVLAAHSFGCLA TAHALQQGVPAADIAGVLFVAPASPKKFEYAGAFDARRLGVPSILIGSETDPWMPLAGARELATHLGSAFVNLGDAGHIN TAAGYGPWPRAKYLVDTLAHCAAPLRFQDEGEELATQVFS
Specific function: Unknown
COG id: COG3545
COG function: function code R; Predicted esterase of the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21652; Mature: 21652
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSCTRSIWPPRLVTVPGLHGSEGAHWQTWLERQFPRSLRVEQADWDAPNLGQWAQAVRD CCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHH LLARERGPFVLAAHSFGCLATAHALQQGVPAADIAGVLFVAPASPKKFEYAGAFDARRLG HHHHCCCCEEEEECCCHHHHHHHHHHHCCCHHHHCCEEEECCCCCCCEEECCCCCHHHCC VPSILIGSETDPWMPLAGARELATHLGSAFVNLGDAGHINTAAGYGPWPRAKYLVDTLAH CCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH CAAPLRFQDEGEELATQVFS HHCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MFSCTRSIWPPRLVTVPGLHGSEGAHWQTWLERQFPRSLRVEQADWDAPNLGQWAQAVRD CCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHH LLARERGPFVLAAHSFGCLATAHALQQGVPAADIAGVLFVAPASPKKFEYAGAFDARRLG HHHHCCCCEEEEECCCHHHHHHHHHHHCCCHHHHCCEEEECCCCCCCEEECCCCCHHHCC VPSILIGSETDPWMPLAGARELATHLGSAFVNLGDAGHINTAAGYGPWPRAKYLVDTLAH CCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH CAAPLRFQDEGEELATQVFS HHCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA