Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is yxxF [H]

Identifier: 186474929

GI number: 186474929

Start: 181042

End: 181941

Strand: Direct

Name: yxxF [H]

Synonym: Bphy_0160

Alternate gene names: 186474929

Gene position: 181042-181941 (Clockwise)

Preceding gene: 186474927

Following gene: 186474936

Centisome position: 5.2

GC content: 63.0

Gene sequence:

>900_bases
ATGACGACAGGTAATGAAGTGCGGCAAGGCGCGTTCGAGATGACGCTCGCGATGCTGATGTCGGGAACGATCGGCTGGCT
GGTTGTTTCTTCGCAGCAATCAGCGCTCAACGTCGCCTTCTTCCGATGCCTGTTCGGCGGCGCAACCTTGCTGCTGATTT
GCGCGGCGCGCGGGCTGCTCGCACGCAAGCTGTTCTCGTGGAAGATGATCGCGCTCGCGACGCTCGGCAGCGCGGCCATC
GTCGCGAACTGGGTGTTGCTGTTCGCCGCTTACTCGCGCGCGTCGATATCGATGGCGACGACGGTCTACAGCACGCAGCC
GTTCATGCTCGTCGCGCTGGGGGCGCTGGTGTTTCGCGAACGCGTGACGGCGTCGACGGTCGTGTGGCTGCTGATCGCGT
TCATCGGCCTCGTGTTCGTCGTGAAAGTCGAGCCGGCTGTGCTGGCTGTGCCGGGGCAATATCTGCAGGGCGTGGCATAC
GCGGTCGGCGCAGCGTTCCTGTATGCCGTCTCGTCGATCATCACAAAGCACTTGAAGAACACGCCGCCGCACCTTATCGC
ACTGATCACCGTGGCGACGGGCGTCGTCGTGCTCGCTCCGTCCGTGCAGTACGATGCGTTGCCATCAACGGGCATGCATT
GGCTGCAACTCGTCACGCTCGGTGTCGTGAACACCGGGATCATGTACGTGCTGCTGTATGGCGCGATCCAGAAGCTGCCG
ACGGCGATGACGGGCGCACTGTCTTTCATCTATCCGGTCGTGGCCATCATCGTGGACCGCGTCGCCTTCGGCCAAAAGCT
CGCGTGGATTCAGGTGCTTGGCGCCGTACTGATCCTTCTCGCGGCGGCGGGCGTGAATCTCGGCTGGCGCATCGTGCCCG
CGCGGCGCTACTCGATATAA

Upstream 100 bases:

>100_bases
CATTCAAGGCAAACTCGTAGAATCGCCTTATTTTAGCTATGTATCATGGACTTCCGATTAATTACACTGACGTCAGAGGT
GATTCTTCGTGGAGACCGCG

Downstream 100 bases:

>100_bases
CGGTAGTTCATACCGATAGTACGGATTCCGAATAAGGCATCAGGCCGAACGTTAAAGATTCTGTAGGGAAATCACCGATG
CGTTCGAAAGGTGCGCGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MTTGNEVRQGAFEMTLAMLMSGTIGWLVVSSQQSALNVAFFRCLFGGATLLLICAARGLLARKLFSWKMIALATLGSAAI
VANWVLLFAAYSRASISMATTVYSTQPFMLVALGALVFRERVTASTVVWLLIAFIGLVFVVKVEPAVLAVPGQYLQGVAY
AVGAAFLYAVSSIITKHLKNTPPHLIALITVATGVVVLAPSVQYDALPSTGMHWLQLVTLGVVNTGIMYVLLYGAIQKLP
TAMTGALSFIYPVVAIIVDRVAFGQKLAWIQVLGAVLILLAAAGVNLGWRIVPARRYSI

Sequences:

>Translated_299_residues
MTTGNEVRQGAFEMTLAMLMSGTIGWLVVSSQQSALNVAFFRCLFGGATLLLICAARGLLARKLFSWKMIALATLGSAAI
VANWVLLFAAYSRASISMATTVYSTQPFMLVALGALVFRERVTASTVVWLLIAFIGLVFVVKVEPAVLAVPGQYLQGVAY
AVGAAFLYAVSSIITKHLKNTPPHLIALITVATGVVVLAPSVQYDALPSTGMHWLQLVTLGVVNTGIMYVLLYGAIQKLP
TAMTGALSFIYPVVAIIVDRVAFGQKLAWIQVLGAVLILLAAAGVNLGWRIVPARRYSI
>Mature_298_residues
TTGNEVRQGAFEMTLAMLMSGTIGWLVVSSQQSALNVAFFRCLFGGATLLLICAARGLLARKLFSWKMIALATLGSAAIV
ANWVLLFAAYSRASISMATTVYSTQPFMLVALGALVFRERVTASTVVWLLIAFIGLVFVVKVEPAVLAVPGQYLQGVAYA
VGAAFLYAVSSIITKHLKNTPPHLIALITVATGVVVLAPSVQYDALPSTGMHWLQLVTLGVVNTGIMYVLLYGAIQKLPT
AMTGALSFIYPVVAIIVDRVAFGQKLAWIQVLGAVLILLAAAGVNLGWRIVPARRYSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31878; Mature: 31747

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGNEVRQGAFEMTLAMLMSGTIGWLVVSSQQSALNVAFFRCLFGGATLLLICAARGLL
CCCCHHHHHHHHHHHHHHHHCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARKLFSWKMIALATLGSAAIVANWVLLFAAYSRASISMATTVYSTQPFMLVALGALVFRE
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RVTASTVVWLLIAFIGLVFVVKVEPAVLAVPGQYLQGVAYAVGAAFLYAVSSIITKHLKN
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TPPHLIALITVATGVVVLAPSVQYDALPSTGMHWLQLVTLGVVNTGIMYVLLYGAIQKLP
CCHHHHHHHHHHHCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAMTGALSFIYPVVAIIVDRVAFGQKLAWIQVLGAVLILLAAAGVNLGWRIVPARRYSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
>Mature Secondary Structure 
TTGNEVRQGAFEMTLAMLMSGTIGWLVVSSQQSALNVAFFRCLFGGATLLLICAARGLL
CCCHHHHHHHHHHHHHHHHCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARKLFSWKMIALATLGSAAIVANWVLLFAAYSRASISMATTVYSTQPFMLVALGALVFRE
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RVTASTVVWLLIAFIGLVFVVKVEPAVLAVPGQYLQGVAYAVGAAFLYAVSSIITKHLKN
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TPPHLIALITVATGVVVLAPSVQYDALPSTGMHWLQLVTLGVVNTGIMYVLLYGAIQKLP
CCHHHHHHHHHHHCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAMTGALSFIYPVVAIIVDRVAFGQKLAWIQVLGAVLILLAAAGVNLGWRIVPARRYSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704263; 9384377; 8316082 [H]