Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is sbp [H]

Identifier: 186474938

GI number: 186474938

Start: 187790

End: 188815

Strand: Direct

Name: sbp [H]

Synonym: Bphy_0169

Alternate gene names: 186474938

Gene position: 187790-188815 (Clockwise)

Preceding gene: 186474936

Following gene: 186474951

Centisome position: 5.4

GC content: 62.67

Gene sequence:

>1026_bases
ATGGCAGGCAGAGGGGATAAAGCGCGCGGGCTCGCGGCCGGCTTCACGGCTTTGACGCTTGCGCTTGGTGCTGCGCAGAA
CGCGCATGCGGATGCATCGCTGTTGAACGTGTCGTATGACGTGACGCGCGAGCTCTATAAGGACATCAACACGGCGTTCG
TCGCGGCGTACAAGCAGAAGAGCGGTGAGACGGTGGCAATCAGGCAGTCGCACGGCGCTTCAAGTGCGCAGGCGCTGTCG
GTGCTGCAAGGCTTGCAGGCCGACGTCGTGACGATGAACCAGCCGAATGATATCGACCTGCTGGCCGAGCGCGGCCATCT
CGTTCCCGACAACTGGCGCGCGCGTTTGCCGAACAACAGCGCGCCTTACACGACGACCATGGTGTTCCTCGTGCGCAAGG
GCAATCCGAAGCACATCAAGGACTGGGACGATCTGGCGAAGCCTGGCGTGCAGGTTGTGATTCCGAATCCGAAGACGGCG
GGTAACGGCCGCTACACGTACCTGGCCGCATGGGGTTACAAGAAACAGAACGGTGCGACGGACGCTCAGGCGCTCGATTT
CGAGAAGTCGATCTTCCGCAACGTGCCCGTGCTCGACACGGGCGGCCGCGGCGCGACGACGACGTTTACGCAGCGGGGCA
TCGGCGACGTGCTGGTGACATTCGAGAACGAGGTGTCGCTGATCGACACGGGCGTGGGTGCGGGCAGCTTCGAGGCCGTG
TATCCATCGATCAGCATTCTTGCCGAGCCGCCCGTGACGATCGTGGACAAGGTGGTCGACAAGCGCGGCACGCGCAAGGA
AGCGCAGGCGTATCTCGACTATCTGTACACCGCGCCCGCGCAGGAGATCATCGCGCAGCACCACTTGCGTCCGCGTGATC
CCGCCGTGCTCGCAAAGCACGCGAGCGAGTTCAAGCCGCTGAAGACGTTCACCGTCGAGCAGGTGTTCGGCAGCTGGCAG
AAAGCACAGCAAAGCCATTTCGCAGACGGCGGCACGTTCGATCAGATCATCGTCGACCGGAAGTAA

Upstream 100 bases:

>100_bases
GCTGCCTGTTTTCCAGGAATCGCAAGAAGCGATCCGATAGAATCGCTGCTCCAGCCGCGTGATGCGGCCATTTGCTTCAT
CATTGAAAAGCGGGGAAAAG

Downstream 100 bases:

>100_bases
GCGCGGTATCGCGCGAAACGAAAAAGCCGCTTCGACATTCGAAGCGGCTTTTTCGTTGGAGGTGAGCGTAGGGGCGTACG
TCGAAGCAACCCGGACAATC

Product: sulfate ABC transporter periplasmic sulfate-binding protein

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: Sulfate starvation-induced protein 2; SSI2 [H]

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MAGRGDKARGLAAGFTALTLALGAAQNAHADASLLNVSYDVTRELYKDINTAFVAAYKQKSGETVAIRQSHGASSAQALS
VLQGLQADVVTMNQPNDIDLLAERGHLVPDNWRARLPNNSAPYTTTMVFLVRKGNPKHIKDWDDLAKPGVQVVIPNPKTA
GNGRYTYLAAWGYKKQNGATDAQALDFEKSIFRNVPVLDTGGRGATTTFTQRGIGDVLVTFENEVSLIDTGVGAGSFEAV
YPSISILAEPPVTIVDKVVDKRGTRKEAQAYLDYLYTAPAQEIIAQHHLRPRDPAVLAKHASEFKPLKTFTVEQVFGSWQ
KAQQSHFADGGTFDQIIVDRK

Sequences:

>Translated_341_residues
MAGRGDKARGLAAGFTALTLALGAAQNAHADASLLNVSYDVTRELYKDINTAFVAAYKQKSGETVAIRQSHGASSAQALS
VLQGLQADVVTMNQPNDIDLLAERGHLVPDNWRARLPNNSAPYTTTMVFLVRKGNPKHIKDWDDLAKPGVQVVIPNPKTA
GNGRYTYLAAWGYKKQNGATDAQALDFEKSIFRNVPVLDTGGRGATTTFTQRGIGDVLVTFENEVSLIDTGVGAGSFEAV
YPSISILAEPPVTIVDKVVDKRGTRKEAQAYLDYLYTAPAQEIIAQHHLRPRDPAVLAKHASEFKPLKTFTVEQVFGSWQ
KAQQSHFADGGTFDQIIVDRK
>Mature_340_residues
AGRGDKARGLAAGFTALTLALGAAQNAHADASLLNVSYDVTRELYKDINTAFVAAYKQKSGETVAIRQSHGASSAQALSV
LQGLQADVVTMNQPNDIDLLAERGHLVPDNWRARLPNNSAPYTTTMVFLVRKGNPKHIKDWDDLAKPGVQVVIPNPKTAG
NGRYTYLAAWGYKKQNGATDAQALDFEKSIFRNVPVLDTGGRGATTTFTQRGIGDVLVTFENEVSLIDTGVGAGSFEAVY
PSISILAEPPVTIVDKVVDKRGTRKEAQAYLDYLYTAPAQEIIAQHHLRPRDPAVLAKHASEFKPLKTFTVEQVFGSWQK
AQQSHFADGGTFDQIIVDRK

Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]

COG id: COG1613

COG function: function code P; ABC-type sulfate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]

Homologues:

Organism=Escherichia coli, GI1790351, Length=320, Percent_Identity=55.625, Blast_Score=367, Evalue=1e-103,
Organism=Escherichia coli, GI1788765, Length=313, Percent_Identity=49.5207667731629, Blast_Score=315, Evalue=2e-87,

Paralogues:

None

Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR000957
- InterPro:   IPR005669 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 37009; Mature: 36878

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRGDKARGLAAGFTALTLALGAAQNAHADASLLNVSYDVTRELYKDINTAFVAAYKQK
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHEEECHHHHHHHHHHHHHHHHHHHHHHC
SGETVAIRQSHGASSAQALSVLQGLQADVVTMNQPNDIDLLAERGHLVPDNWRARLPNNS
CCCEEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCC
APYTTTMVFLVRKGNPKHIKDWDDLAKPGVQVVIPNPKTAGNGRYTYLAAWGYKKQNGAT
CCCEEEEEEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCC
DAQALDFEKSIFRNVPVLDTGGRGATTTFTQRGIGDVLVTFENEVSLIDTGVGAGSFEAV
CHHHHHHHHHHHCCCCEEECCCCCCCCHHHHCCCCEEEEEECCCEEEEECCCCCCCCHHH
YPSISILAEPPVTIVDKVVDKRGTRKEAQAYLDYLYTAPAQEIIAQHHLRPRDPAVLAKH
CCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHH
ASEFKPLKTFTVEQVFGSWQKAQQSHFADGGTFDQIIVDRK
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
>Mature Secondary Structure 
AGRGDKARGLAAGFTALTLALGAAQNAHADASLLNVSYDVTRELYKDINTAFVAAYKQK
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHEEECHHHHHHHHHHHHHHHHHHHHHHC
SGETVAIRQSHGASSAQALSVLQGLQADVVTMNQPNDIDLLAERGHLVPDNWRARLPNNS
CCCEEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCC
APYTTTMVFLVRKGNPKHIKDWDDLAKPGVQVVIPNPKTAGNGRYTYLAAWGYKKQNGAT
CCCEEEEEEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCC
DAQALDFEKSIFRNVPVLDTGGRGATTTFTQRGIGDVLVTFENEVSLIDTGVGAGSFEAV
CHHHHHHHHHHHCCCCEEECCCCCCCCHHHHCCCCEEEEEECCCEEEEECCCCCCCCHHH
YPSISILAEPPVTIVDKVVDKRGTRKEAQAYLDYLYTAPAQEIIAQHHLRPRDPAVLAKH
CCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHH
ASEFKPLKTFTVEQVFGSWQKAQQSHFADGGTFDQIIVDRK
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3158524; 2002055; 8346018; 9278503; 9298646; 8774726 [H]