Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186474851

Identifier: 186474851

GI number: 186474851

Start: 90294

End: 91055

Strand: Direct

Name: 186474851

Synonym: Bphy_0080

Alternate gene names: NA

Gene position: 90294-91055 (Clockwise)

Preceding gene: 186474849

Following gene: 186474853

Centisome position: 2.6

GC content: 63.12

Gene sequence:

>762_bases
ATGTCAGTCCATTCGAAGAAAGAGCAGATTCAGGTGCTGCGCGAGCAGGGTTTTGTCGTGGTGCCGAGTCTCGTCACGCC
CGAGCGCTGCGACGAGATGAAACAGATCGCGCGGCAGCAGTTGCAGATCGCGGCCGACCCGGTCGAATTCGAAGCGGACC
TGCGCTATCCTGGCGCGCCGGAGTCGAAAGAAGCGCCCGGCGGTCATACCGTGCGGCGTCTGCTGGATGCTTATGCACGT
CATCCGCGGTTTGCGGAATGGGGGACGGCGCCGGAAATCCGCGGCTGGATGGAACTGTATTTCGGCGAAGAGCCGCGCCT
GTCGCGCGCGCATCACAACTGCATGATGACCAAGCATCCCGCGTACGGCAGCCTGACGGGCTGGCATCGCGATGTGCGCT
ACTGGTCATTCGAGCGCGACGATCTGGTGTCGGTGTGGCTCGCGCTCGGCGACGAAATCGTCGATAACGGCGCGCTCTGG
TTCGTGCCGGGTTCGCATGCCGCAGCGTTCACGTCGGATCGCTTCGACGAAGCGAAATTCTTCCGCTCGGACGTGCCGGA
GAATGCCGCGCTGATCCAGAAAGCGGTGTCGCCCGCGCTGAAGGCGGGCGACGTGGTCTTCTTCCACTGCAACACGCTGC
ATTCGGCGGGGAAGAATCTGTCGGAGCAGGTGAAGTTCTCGCTCGTCTTCACCTATCACGGCGCGAGCAATGTGCCGCTG
CCGGGTTCGCGCTCTGCGTCGAAGCCCGAAGTCGCGTTCTGA

Upstream 100 bases:

>100_bases
TTCGCGCGAGGCGCAACGCAAGACCGGACGCCGATCCGATCGTGCCCGTTTTACAATGGGAAACCGGTTGTCGAACGAAC
GCTAGCTGAACGGAACGTCC

Downstream 100 bases:

>100_bases
ACCCCTTGTCCCGCCGCTGGCCGGGGCCGCTATGCGGCGGCGCGTCAGCGCCTGTTCGACGCGAGTCCGATCAGGCCTGC
GAGCGTCGCAACGATCCCGC

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: Deoxygenase; Hypophosphite Dioxygenase; Potassium Channel Protein; Phytanoyl-CoA Deoxygenase Family Protein; Phytanoyl-CoA Dioxygenase Family Protein; Ectoine Hydroxylase; Phytanoyl-CoA Dioxygenase PhyH Family; Dioxygenase

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSVHSKKEQIQVLREQGFVVVPSLVTPERCDEMKQIARQQLQIAADPVEFEADLRYPGAPESKEAPGGHTVRRLLDAYAR
HPRFAEWGTAPEIRGWMELYFGEEPRLSRAHHNCMMTKHPAYGSLTGWHRDVRYWSFERDDLVSVWLALGDEIVDNGALW
FVPGSHAAAFTSDRFDEAKFFRSDVPENAALIQKAVSPALKAGDVVFFHCNTLHSAGKNLSEQVKFSLVFTYHGASNVPL
PGSRSASKPEVAF

Sequences:

>Translated_253_residues
MSVHSKKEQIQVLREQGFVVVPSLVTPERCDEMKQIARQQLQIAADPVEFEADLRYPGAPESKEAPGGHTVRRLLDAYAR
HPRFAEWGTAPEIRGWMELYFGEEPRLSRAHHNCMMTKHPAYGSLTGWHRDVRYWSFERDDLVSVWLALGDEIVDNGALW
FVPGSHAAAFTSDRFDEAKFFRSDVPENAALIQKAVSPALKAGDVVFFHCNTLHSAGKNLSEQVKFSLVFTYHGASNVPL
PGSRSASKPEVAF
>Mature_252_residues
SVHSKKEQIQVLREQGFVVVPSLVTPERCDEMKQIARQQLQIAADPVEFEADLRYPGAPESKEAPGGHTVRRLLDAYARH
PRFAEWGTAPEIRGWMELYFGEEPRLSRAHHNCMMTKHPAYGSLTGWHRDVRYWSFERDDLVSVWLALGDEIVDNGALWF
VPGSHAAAFTSDRFDEAKFFRSDVPENAALIQKAVSPALKAGDVVFFHCNTLHSAGKNLSEQVKFSLVFTYHGASNVPLP
GSRSASKPEVAF

Specific function: Unknown

COG id: COG5285

COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28408; Mature: 28277

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVHSKKEQIQVLREQGFVVVPSLVTPERCDEMKQIARQQLQIAADPVEFEADLRYPGAP
CCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC
ESKEAPGGHTVRRLLDAYARHPRFAEWGTAPEIRGWMELYFGEEPRLSRAHHNCMMTKHP
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCEEECCC
AYGSLTGWHRDVRYWSFERDDLVSVWLALGDEIVDNGALWFVPGSHAAAFTSDRFDEAKF
CCCCCCCHHHCCEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCHHHHHH
FRSDVPENAALIQKAVSPALKAGDVVFFHCNTLHSAGKNLSEQVKFSLVFTYHGASNVPL
HHHCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCHHHHEEEEEEEEECCCCCCCC
PGSRSASKPEVAF
CCCCCCCCCCCCC
>Mature Secondary Structure 
SVHSKKEQIQVLREQGFVVVPSLVTPERCDEMKQIARQQLQIAADPVEFEADLRYPGAP
CCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC
ESKEAPGGHTVRRLLDAYARHPRFAEWGTAPEIRGWMELYFGEEPRLSRAHHNCMMTKHP
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCEEECCC
AYGSLTGWHRDVRYWSFERDDLVSVWLALGDEIVDNGALWFVPGSHAAAFTSDRFDEAKF
CCCCCCCHHHCCEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCHHHHHH
FRSDVPENAALIQKAVSPALKAGDVVFFHCNTLHSAGKNLSEQVKFSLVFTYHGASNVPL
HHHCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCHHHHEEEEEEEEECCCCCCCC
PGSRSASKPEVAF
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA