| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yghZ [H]
Identifier: 186474853
GI number: 186474853
Start: 91610
End: 92653
Strand: Direct
Name: yghZ [H]
Synonym: Bphy_0082
Alternate gene names: 186474853
Gene position: 91610-92653 (Clockwise)
Preceding gene: 186474851
Following gene: 186474857
Centisome position: 2.63
GC content: 60.92
Gene sequence:
>1044_bases ATGGCTTACGAAGCAGCTTCAGCCCGTTATTCGGATATGCAGTACCGCGTGTGCGGCAAGTCAGGTCTCAAACTGCCGGC ACTGTCGCTCGGCCTGTGGCACAACTTCGGCGACACCACGCCGATCTCGACGCAACGCGACATACTGCGCACGTCGTTCG ATCTCGGCATCACTCACTTCGACCTGGCGAACAACTACGGCCCGCCATACGGCAGCGCGGAAACGAACTTCGGCCGCATC TTCAAGGACGACTTCAGGCCGTATCGCGATGAATTGCTGATTTCGTCGAAGGCCGGTTGGGATATGTGGCCTGGCCCCTA CGGCCAGGGCGGCGGGTCGCGCAAATACATCCTCGCGAGCCTCGATCAGAGTCTGCAGCGCATGGGTCTCGACTACGTCG ACATCTTTTATTCGCACCGTTTCGACGTCGACACGCCGCTCGAAGAAACGGCAGGTGCGCTTGCGAGCGCGGTGCAGCAG GGTAAGGCGCTGTATATCGGCATCTCGTCGTACTCCGCGCAAAAGACCCGCGAAATGGCAAAGCTGCTTGCGGAATACAA GGTGCCGCTGCTGATTCATCAGCCTGCATACAACATGCTGAATCGCTGGATCGAAAGCGAACTGCTCAACGCGCTGGAGG AAACGGGTTCGGGTGCGATTGCGTTCACGCCGCTCGCGCAAGGTCTGCTGACCGGCAAATACCTGAACGGCGTGCCGCAG GACGCTCGCGTCAACAAGGCGGGCGGCGGTTCGCTGAAGCAGGAGCACCTGAGCGAGCAGAATATCGAGCGCGTGCGCAA GCTCAACGACATCGCGCAACGCAGAGGTCAGAGCCTTGCGCAGATGGCGCTCGCCTGGACGCTGCGTGATTCGCGCGTGA CGTCTGCGCTGATCGGCGCGAGCAAGGCCGAGCAGGTCCGCGAGAATGTCGCGGCGCTGAAGAACCTGTCGTTCACAGCG GAGGAGCTGGCGGAGATCGATCGCTATGCGACGGAAGGCAGCGTGAACCTGTGGGAGAAGCCATCGACGGATCAGCACAT CTGA
Upstream 100 bases:
>100_bases CGGTATCACGGCGGCACGACACGACAACAACAAGCGTTCACCCGAGCGATGCACGACGGCATCGTCGACTCCACTTCAGT TCTCGACAAGGACTTCGGCA
Downstream 100 bases:
>100_bases TCGCGACAATCGCAAGTCGATGCGAGATAAAAAAGCCGCCCATGTTGGCGGCTTTTTCAATGGTGCGCGGGGTTGCTTCC ACCAGCGCCTTTCGCACGCG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MAYEAASARYSDMQYRVCGKSGLKLPALSLGLWHNFGDTTPISTQRDILRTSFDLGITHFDLANNYGPPYGSAETNFGRI FKDDFRPYRDELLISSKAGWDMWPGPYGQGGGSRKYILASLDQSLQRMGLDYVDIFYSHRFDVDTPLEETAGALASAVQQ GKALYIGISSYSAQKTREMAKLLAEYKVPLLIHQPAYNMLNRWIESELLNALEETGSGAIAFTPLAQGLLTGKYLNGVPQ DARVNKAGGGSLKQEHLSEQNIERVRKLNDIAQRRGQSLAQMALAWTLRDSRVTSALIGASKAEQVRENVAALKNLSFTA EELAEIDRYATEGSVNLWEKPSTDQHI
Sequences:
>Translated_347_residues MAYEAASARYSDMQYRVCGKSGLKLPALSLGLWHNFGDTTPISTQRDILRTSFDLGITHFDLANNYGPPYGSAETNFGRI FKDDFRPYRDELLISSKAGWDMWPGPYGQGGGSRKYILASLDQSLQRMGLDYVDIFYSHRFDVDTPLEETAGALASAVQQ GKALYIGISSYSAQKTREMAKLLAEYKVPLLIHQPAYNMLNRWIESELLNALEETGSGAIAFTPLAQGLLTGKYLNGVPQ DARVNKAGGGSLKQEHLSEQNIERVRKLNDIAQRRGQSLAQMALAWTLRDSRVTSALIGASKAEQVRENVAALKNLSFTA EELAEIDRYATEGSVNLWEKPSTDQHI >Mature_346_residues AYEAASARYSDMQYRVCGKSGLKLPALSLGLWHNFGDTTPISTQRDILRTSFDLGITHFDLANNYGPPYGSAETNFGRIF KDDFRPYRDELLISSKAGWDMWPGPYGQGGGSRKYILASLDQSLQRMGLDYVDIFYSHRFDVDTPLEETAGALASAVQQG KALYIGISSYSAQKTREMAKLLAEYKVPLLIHQPAYNMLNRWIESELLNALEETGSGAIAFTPLAQGLLTGKYLNGVPQD ARVNKAGGGSLKQEHLSEQNIERVRKLNDIAQRRGQSLAQMALAWTLRDSRVTSALIGASKAEQVRENVAALKNLSFTAE ELAEIDRYATEGSVNLWEKPSTDQHI
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27436964, Length=334, Percent_Identity=34.7305389221557, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI27436969, Length=322, Percent_Identity=35.7142857142857, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI27436962, Length=324, Percent_Identity=35.4938271604938, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI4504825, Length=320, Percent_Identity=35.625, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI27436966, Length=334, Percent_Identity=34.4311377245509, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI27436971, Length=337, Percent_Identity=34.7181008902077, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI41152114, Length=208, Percent_Identity=31.25, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI223718702, Length=307, Percent_Identity=28.6644951140065, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI41327764, Length=212, Percent_Identity=29.2452830188679, Blast_Score=83, Evalue=3e-16, Organism=Escherichia coli, GI1789375, Length=345, Percent_Identity=65.7971014492754, Blast_Score=481, Evalue=1e-137, Organism=Escherichia coli, GI87081735, Length=324, Percent_Identity=33.641975308642, Blast_Score=152, Evalue=4e-38, Organism=Escherichia coli, GI1788070, Length=285, Percent_Identity=32.280701754386, Blast_Score=111, Evalue=8e-26, Organism=Escherichia coli, GI1789199, Length=342, Percent_Identity=30.4093567251462, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1788081, Length=317, Percent_Identity=26.813880126183, Blast_Score=84, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6325169, Length=334, Percent_Identity=27.8443113772455, Blast_Score=96, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6319958, Length=286, Percent_Identity=24.4755244755245, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6323998, Length=327, Percent_Identity=24.4648318042813, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6322615, Length=249, Percent_Identity=27.3092369477912, Blast_Score=80, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6319951, Length=278, Percent_Identity=25.1798561151079, Blast_Score=70, Evalue=4e-13, Organism=Drosophila melanogaster, GI24640980, Length=340, Percent_Identity=26.4705882352941, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI45549126, Length=340, Percent_Identity=26.4705882352941, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI24646159, Length=317, Percent_Identity=24.9211356466877, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24646155, Length=345, Percent_Identity=26.9565217391304, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38468; Mature: 38337
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYEAASARYSDMQYRVCGKSGLKLPALSLGLWHNFGDTTPISTQRDILRTSFDLGITHF CCCCCCCCHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEE DLANNYGPPYGSAETNFGRIFKDDFRPYRDELLISSKAGWDMWPGPYGQGGGSRKYILAS EHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHEEEECCCCCCCCCCCCCCCCCCCHHHHHH LDQSLQRMGLDYVDIFYSHRFDVDTPLEETAGALASAVQQGKALYIGISSYSAQKTREMA HHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH KLLAEYKVPLLIHQPAYNMLNRWIESELLNALEETGSGAIAFTPLAQGLLTGKYLNGVPQ HHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCC DARVNKAGGGSLKQEHLSEQNIERVRKLNDIAQRRGQSLAQMALAWTLRDSRVTSALIGA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SKAEQVRENVAALKNLSFTAEELAEIDRYATEGSVNLWEKPSTDQHI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCC >Mature Secondary Structure AYEAASARYSDMQYRVCGKSGLKLPALSLGLWHNFGDTTPISTQRDILRTSFDLGITHF CCCCCCCHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEE DLANNYGPPYGSAETNFGRIFKDDFRPYRDELLISSKAGWDMWPGPYGQGGGSRKYILAS EHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHEEEECCCCCCCCCCCCCCCCCCCHHHHHH LDQSLQRMGLDYVDIFYSHRFDVDTPLEETAGALASAVQQGKALYIGISSYSAQKTREMA HHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH KLLAEYKVPLLIHQPAYNMLNRWIESELLNALEETGSGAIAFTPLAQGLLTGKYLNGVPQ HHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCC DARVNKAGGGSLKQEHLSEQNIERVRKLNDIAQRRGQSLAQMALAWTLRDSRVTSALIGA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SKAEQVRENVAALKNLSFTAEELAEIDRYATEGSVNLWEKPSTDQHI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]