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The map label for this gene is yhfM [C]

Identifier: 186474778

GI number: 186474778

Start: 7331

End: 8734

Strand: Direct

Name: yhfM [C]

Synonym: Bphy_0006

Alternate gene names: 186474778

Gene position: 7331-8734 (Clockwise)

Preceding gene: 186474776

Following gene: 186474779

Centisome position: 0.21

GC content: 60.61

Gene sequence:

>1404_bases
ATGAAACAAGCGTCGACAACCCAGCACAAAGGAAACGTCACGCATCATGAACTGAAGCAGACGCTCGGCACCTGGCAGCT
TTGGGGCATCGCCGTCGGTCTGGTGATTTCGGGCGAATACTTCGGCTGGAGCTATGGTTGGGCGAGCGCCGGTACGCTCG
GCTTCGTGATCACCGCGCTCTTCATTGCCGCGATGTACACGACGTTTATCTTCAGCTTCACCGAGCTCACGACGTCGATT
CCGCACGCAGGCGGCCCGTTCGCATACGCGCGTCACGCGTTCGGCCCCACAGGTGGCTACATCGCGGGGGCAGCGACGCT
GGTGGAGTTCGTGTTCGCACCGCCCGCTATCGCGCTGGCGATCGGCGCGTATCTGCATGTGCAGTTTCCCGGTCTTGAAC
CGAAGCATGCGGCAATGGGCGCTTACCTCGTGTTCATGGCGCTGAACATCGTCGGCGTGCAGATAGCAGCGGCATTCGAG
CTTTGCGTGACATTGCTCGCCATCTTCGAGCTGCTGGTATTTATGGGCGTCGTATCGCCGGGCTTCCAATGGTCGAACTT
CGCGAAGGGCGGCTGGGCCGGCTCGGACGCGTTCAACATGGGTTCGTTTCACGGTATGTTCGCCGCGATTCCGTTCGCGA
TCTGGTTCTTCCTCGCGATCGAAGGCGTTGCGATGGCCGCCGAAGAAGCGAAGAACCCGAAGCGCTCGATCCCGATCGCT
TACGTGACGGGCATCCTGACGCTCGTCGTGCTTGCGATCGGCGTGATGGTGTTCGCGGGCGCCGCGGGCGACTGGACGAA
GCTCTCCAACATCAACGACCCGCTGCCGCAAGCCATGAAATACATCGTCGGCGAAAACAGCGGCTGGATGCATATGCTCG
TCTGGCTCGGCCTGTTCGGTCTCGTCGCGTCGTTTCACGGCATCATCCTGGGCTATTCACGGCAGATCTTCGCGCTGGCT
CGCGCAGGCTATCTGCCGGAGTGGCTGTCGAAGGTGCATCCGCGCTTCAAGACTCCGCATCGCGCGATTCTCGCGGGTGG
TGTGGTCGGCATCGCCGCCATTTATAGTGACGAGCTGATCCAGTTCGGCGGCCAGACGCTGACCGCGAATATCGTGACGA
TGTCGGTATTTGGCGCTATCGTGATGTACATCATCAGCATGCTGGCGCTTTTCAAGTTGCGCCGCATCGAGCCGAACATG
GAGCGTCCGTTCCGCGCGCCGCTGTTTCCGTACTTCCCGGCGTTCGCACTGGTGGCTGCCGTGATTTCGCTGGGCACGAT
GATCTACTTCAATCTGCTCGTCGCGCTCGTGTTTGCCGCTTTCCTCGCGCTCGGCTACGGTTATTTCCTGATGACGCGTC
ATCAACGCGAAGCGGCCCCGGCAGACGTTTTGCTCGAAGAATGA

Upstream 100 bases:

>100_bases
TAATGGCTTCCTACCATCGCCAGATGCCGCCCGTAGTGGGCAACCGCGACGCGACCGCGAACGCGATTGCCGACCGGCAA
CTTTAAAAAGGGAGCCTCCG

Downstream 100 bases:

>100_bases
AGGCAGCGCAGGCATCGCACGCGGCACTGACGCATTGGCAATAGAGCCGCGCGCAGCAGGCGCGGCGATGGAGTACACGA
CATGAGCTACATGGAGACAA

Product: ethanolamine transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MKQASTTQHKGNVTHHELKQTLGTWQLWGIAVGLVISGEYFGWSYGWASAGTLGFVITALFIAAMYTTFIFSFTELTTSI
PHAGGPFAYARHAFGPTGGYIAGAATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAAAFE
LCVTLLAIFELLVFMGVVSPGFQWSNFAKGGWAGSDAFNMGSFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPIA
YVTGILTLVVLAIGVMVFAGAAGDWTKLSNINDPLPQAMKYIVGENSGWMHMLVWLGLFGLVASFHGIILGYSRQIFALA
RAGYLPEWLSKVHPRFKTPHRAILAGGVVGIAAIYSDELIQFGGQTLTANIVTMSVFGAIVMYIISMLALFKLRRIEPNM
ERPFRAPLFPYFPAFALVAAVISLGTMIYFNLLVALVFAAFLALGYGYFLMTRHQREAAPADVLLEE

Sequences:

>Translated_467_residues
MKQASTTQHKGNVTHHELKQTLGTWQLWGIAVGLVISGEYFGWSYGWASAGTLGFVITALFIAAMYTTFIFSFTELTTSI
PHAGGPFAYARHAFGPTGGYIAGAATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAAAFE
LCVTLLAIFELLVFMGVVSPGFQWSNFAKGGWAGSDAFNMGSFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPIA
YVTGILTLVVLAIGVMVFAGAAGDWTKLSNINDPLPQAMKYIVGENSGWMHMLVWLGLFGLVASFHGIILGYSRQIFALA
RAGYLPEWLSKVHPRFKTPHRAILAGGVVGIAAIYSDELIQFGGQTLTANIVTMSVFGAIVMYIISMLALFKLRRIEPNM
ERPFRAPLFPYFPAFALVAAVISLGTMIYFNLLVALVFAAFLALGYGYFLMTRHQREAAPADVLLEE
>Mature_467_residues
MKQASTTQHKGNVTHHELKQTLGTWQLWGIAVGLVISGEYFGWSYGWASAGTLGFVITALFIAAMYTTFIFSFTELTTSI
PHAGGPFAYARHAFGPTGGYIAGAATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAAAFE
LCVTLLAIFELLVFMGVVSPGFQWSNFAKGGWAGSDAFNMGSFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPIA
YVTGILTLVVLAIGVMVFAGAAGDWTKLSNINDPLPQAMKYIVGENSGWMHMLVWLGLFGLVASFHGIILGYSRQIFALA
RAGYLPEWLSKVHPRFKTPHRAILAGGVVGIAAIYSDELIQFGGQTLTANIVTMSVFGAIVMYIISMLALFKLRRIEPNM
ERPFRAPLFPYFPAFALVAAVISLGTMIYFNLLVALVFAAFLALGYGYFLMTRHQREAAPADVLLEE

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI7657683, Length=384, Percent_Identity=26.0416666666667, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI4507047, Length=165, Percent_Identity=31.5151515151515, Blast_Score=69, Evalue=9e-12,
Organism=Escherichia coli, GI87082250, Length=421, Percent_Identity=24.4655581947743, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI87082023, Length=373, Percent_Identity=25.201072386059, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI87081869, Length=371, Percent_Identity=22.1024258760108, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1786789, Length=434, Percent_Identity=22.3502304147465, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI2367353, Length=432, Percent_Identity=23.6111111111111, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1786602, Length=480, Percent_Identity=19.375, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1786302, Length=474, Percent_Identity=24.0506329113924, Blast_Score=62, Evalue=7e-11,
Organism=Escherichia coli, GI1790653, Length=402, Percent_Identity=22.1393034825871, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17568033, Length=444, Percent_Identity=25.9009009009009, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17532491, Length=391, Percent_Identity=25.3196930946292, Blast_Score=65, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI71982612, Length=373, Percent_Identity=26.5415549597855, Blast_Score=65, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24667468, Length=410, Percent_Identity=24.8780487804878, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI281366235, Length=431, Percent_Identity=22.737819025522, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI116007820, Length=431, Percent_Identity=22.737819025522, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI116007818, Length=431, Percent_Identity=22.737819025522, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI85725152, Length=431, Percent_Identity=22.737819025522, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24666159, Length=392, Percent_Identity=24.234693877551, Blast_Score=66, Evalue=6e-11,
Organism=Drosophila melanogaster, GI221512776, Length=392, Percent_Identity=24.234693877551, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50557; Mature: 50557

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]