| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is eutB [H]
Identifier: 186474779
GI number: 186474779
Start: 8816
End: 10210
Strand: Direct
Name: eutB [H]
Synonym: Bphy_0007
Alternate gene names: 186474779
Gene position: 8816-10210 (Clockwise)
Preceding gene: 186474778
Following gene: 186474780
Centisome position: 0.25
GC content: 60.79
Gene sequence:
>1395_bases ATGAGCTACATGGAGACAATCGGCAGCCGCACGTATCGTTTTGCCGATCTGAAGTCGCTGATGGCGAAGGCAAGTCCGCT GCGTTCCGGCGATCAGCTCGCCGGCATTGCGGCGGCGAGCGAGGAAGAACGCGTCGCCGCGAAGATGGCGCTGGCGGACG TGCCGTTGCGCACGTTCCTGAACGAGGCGTTGATTCCATACGAGAGCGATGAAGTCACGCGCCTCGTCATCGATACCCAT TCTCCGGAAGCATTCGCGCCGATTGCGCATCTTACCGTCGGGGAATTTCGCAACTGGCTGCTGTCGAGCGAGACGGACAC GGACACACTCACGCGCGTCACGAAAGGACTCACGCCCGAAATGGTGGCGGCCGTGTCGAAGCTGATGCGCAATCAGGATC TGATTCTGGCGGCGCGCAAGCGGCCCGTCATCACTCGCTTTCGCAACACCGTCGGCTTGCCGGGACACATGTCCGTTCGA CTGCAGCCGAACCATCCGACCGACGACGTGAAAGGCATCGCTGCATCGATGATCGACGGTCTGATGTACGGTTGCGGCGA TGCGATGATCGGCATCAATCCCGCATCGGACAGTCTCTCGGCGATCACGAACCTGCTGCTGATGATCGACGACTTCCGCA CCCGCTATCACGTGCCGACGCAATCGTGCGTGCTCACGCATGTGACCAACACGATTTCTGCGATCGAGAAAGGCGCACCC GTCGATCTCGTGTTCCAGTCGATTGCCGGAACAGAAAAAGCCAATGCGGGCTTCGGCATTTCGCTCGCGTTGCTGCAGGA AGCCTACGAGGCGGCGTTGGCGCTCAAGCGCGGCACGGTCGGCGACAACGTGATGTACTTCGAAACAGGGCAGGGCAGTG CGCTGTCGGCGGATGCGCATCATGGCGTCGATCAGCAGACGTGCGAGGTGCGGGCCTACGCGGTCGCGCGCCACTTCAAC CCGTTTCTGGTGAATACGGTGGTCGGCTTTATCGGCCCGGAATACCTTTACGACGGCAAGCAGATCACGCGCGCGGGTCT CGAAGATCACTTCTGCGGCAAGCTGCTCGGCGTGCCGATGGGCTGCGACATCTGCTACACGAATCACGCGGAAGCCGATC AGGACGACATGGATAATCTGCTGACGCTGCTTGGCGTTGCAGGCATCAACTTCATCATGGGCATTCCCGGCGCCGACGAC GTGATGCTCAACTATCAAAGCACGTCGTTCCATGATGCGCTCTATGTGCGCGAGGTGCTCGGATTGCGCCGCGCACCGGA GTTCGAAGAATGGCTGGAATCGATGCAGATCACAGACACGCGCGGCGCGCTGCTCAATGCGCCGACGGGTCAGCCATTGC TCGAAGGCGCGAGCGAATGGATGGGCATCGCATGA
Upstream 100 bases:
>100_bases CGTTTTGCTCGAAGAATGAAGGCAGCGCAGGCATCGCACGCGGCACTGACGCATTGGCAATAGAGCCGCGCGCAGCAGGC GCGGCGATGGAGTACACGAC
Downstream 100 bases:
>100_bases GCGACTCGATCGAAAAGAATGCGTGGCAGGCATTGCGTGCTTTCACGAATGCGCGCATCGCGTTGGGCCGCGCGGGCAAC AGTCTGCCGACCGCGCCGCT
Product: ethanolamine ammonia lyase large subunit
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase large subunit [H]
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MSYMETIGSRTYRFADLKSLMAKASPLRSGDQLAGIAAASEEERVAAKMALADVPLRTFLNEALIPYESDEVTRLVIDTH SPEAFAPIAHLTVGEFRNWLLSSETDTDTLTRVTKGLTPEMVAAVSKLMRNQDLILAARKRPVITRFRNTVGLPGHMSVR LQPNHPTDDVKGIAASMIDGLMYGCGDAMIGINPASDSLSAITNLLLMIDDFRTRYHVPTQSCVLTHVTNTISAIEKGAP VDLVFQSIAGTEKANAGFGISLALLQEAYEAALALKRGTVGDNVMYFETGQGSALSADAHHGVDQQTCEVRAYAVARHFN PFLVNTVVGFIGPEYLYDGKQITRAGLEDHFCGKLLGVPMGCDICYTNHAEADQDDMDNLLTLLGVAGINFIMGIPGADD VMLNYQSTSFHDALYVREVLGLRRAPEFEEWLESMQITDTRGALLNAPTGQPLLEGASEWMGIA
Sequences:
>Translated_464_residues MSYMETIGSRTYRFADLKSLMAKASPLRSGDQLAGIAAASEEERVAAKMALADVPLRTFLNEALIPYESDEVTRLVIDTH SPEAFAPIAHLTVGEFRNWLLSSETDTDTLTRVTKGLTPEMVAAVSKLMRNQDLILAARKRPVITRFRNTVGLPGHMSVR LQPNHPTDDVKGIAASMIDGLMYGCGDAMIGINPASDSLSAITNLLLMIDDFRTRYHVPTQSCVLTHVTNTISAIEKGAP VDLVFQSIAGTEKANAGFGISLALLQEAYEAALALKRGTVGDNVMYFETGQGSALSADAHHGVDQQTCEVRAYAVARHFN PFLVNTVVGFIGPEYLYDGKQITRAGLEDHFCGKLLGVPMGCDICYTNHAEADQDDMDNLLTLLGVAGINFIMGIPGADD VMLNYQSTSFHDALYVREVLGLRRAPEFEEWLESMQITDTRGALLNAPTGQPLLEGASEWMGIA >Mature_463_residues SYMETIGSRTYRFADLKSLMAKASPLRSGDQLAGIAAASEEERVAAKMALADVPLRTFLNEALIPYESDEVTRLVIDTHS PEAFAPIAHLTVGEFRNWLLSSETDTDTLTRVTKGLTPEMVAAVSKLMRNQDLILAARKRPVITRFRNTVGLPGHMSVRL QPNHPTDDVKGIAASMIDGLMYGCGDAMIGINPASDSLSAITNLLLMIDDFRTRYHVPTQSCVLTHVTNTISAIEKGAPV DLVFQSIAGTEKANAGFGISLALLQEAYEAALALKRGTVGDNVMYFETGQGSALSADAHHGVDQQTCEVRAYAVARHFNP FLVNTVVGFIGPEYLYDGKQITRAGLEDHFCGKLLGVPMGCDICYTNHAEADQDDMDNLLTLLGVAGINFIMGIPGADDV MLNYQSTSFHDALYVREVLGLRRAPEFEEWLESMQITDTRGALLNAPTGQPLLEGASEWMGIA
Specific function: Ethanolamine utilization. [C]
COG id: COG4303
COG function: function code E; Ethanolamine ammonia-lyase, large subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082106, Length=437, Percent_Identity=52.8604118993135, Blast_Score=477, Evalue=1e-136,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR010628 [H]
Pfam domain/function: PF06751 EutB [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 50378; Mature: 50247
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYMETIGSRTYRFADLKSLMAKASPLRSGDQLAGIAAASEEERVAAKMALADVPLRTFL CCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHECCCCHHHHHHHHHHHHHCCHHHHH NEALIPYESDEVTRLVIDTHSPEAFAPIAHLTVGEFRNWLLSSETDTDTLTRVTKGLTPE HHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHH MVAAVSKLMRNQDLILAARKRPVITRFRNTVGLPGHMSVRLQPNHPTDDVKGIAASMIDG HHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHH LMYGCGDAMIGINPASDSLSAITNLLLMIDDFRTRYHVPTQSCVLTHVTNTISAIEKGAP HHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC VDLVFQSIAGTEKANAGFGISLALLQEAYEAALALKRGTVGDNVMYFETGQGSALSADAH HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEECCHHH HGVDQQTCEVRAYAVARHFNPFLVNTVVGFIGPEYLYDGKQITRAGLEDHFCGKLLGVPM CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHCCCHHHHHHCCCHHHHHHHHCCCC GCDICYTNHAEADQDDMDNLLTLLGVAGINFIMGIPGADDVMLNYQSTSFHDALYVREVL CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCHHHHHHHHHHH GLRRAPEFEEWLESMQITDTRGALLNAPTGQPLLEGASEWMGIA HCCCCCCHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHCCCC >Mature Secondary Structure SYMETIGSRTYRFADLKSLMAKASPLRSGDQLAGIAAASEEERVAAKMALADVPLRTFL CHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHECCCCHHHHHHHHHHHHHCCHHHHH NEALIPYESDEVTRLVIDTHSPEAFAPIAHLTVGEFRNWLLSSETDTDTLTRVTKGLTPE HHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHH MVAAVSKLMRNQDLILAARKRPVITRFRNTVGLPGHMSVRLQPNHPTDDVKGIAASMIDG HHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHH LMYGCGDAMIGINPASDSLSAITNLLLMIDDFRTRYHVPTQSCVLTHVTNTISAIEKGAP HHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC VDLVFQSIAGTEKANAGFGISLALLQEAYEAALALKRGTVGDNVMYFETGQGSALSADAH HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEECCHHH HGVDQQTCEVRAYAVARHFNPFLVNTVVGFIGPEYLYDGKQITRAGLEDHFCGKLLGVPM CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHCCCHHHHHHCCCHHHHHHHHCCCC GCDICYTNHAEADQDDMDNLLTLLGVAGINFIMGIPGADDVMLNYQSTSFHDALYVREVL CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCHHHHHHHHHHH GLRRAPEFEEWLESMQITDTRGALLNAPTGQPLLEGASEWMGIA HCCCCCCHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]