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The map label for this gene is dcd

Identifier: 183222591

GI number: 183222591

Start: 3362531

End: 3363055

Strand: Reverse

Name: dcd

Synonym: LEPBI_I3246

Alternate gene names: 183222591

Gene position: 3363055-3362531 (Counterclockwise)

Preceding gene: 183222592

Following gene: 183222589

Centisome position: 93.43

GC content: 36.19

Gene sequence:

>525_bases
TTGATTTTAACTGGCAAAGAAATTTTAAAAAGACTCGGTTCCGATATCAAAATTGAACCCTATGATGAAAAACTATTAAA
TCCAAATTCCTATAATTTACGATTACACGAAGATTTATTGGTTTATTCTGAATTTCCATTGGATATGAAAAAACCAAATC
CTGTACGAACCTTAAAAATTCCGGAAGAAGGTTTGTTGCTTGAACCGGGGAATTTGTATTTAGGAAGAACCATAGAATTC
ACGGAAACTCATAACCTTGTTCCCATGTTAGAGGGAAGGTCTTCCATAGGAAGACTTGGAATGTTTGTTCATATCACTGC
TGGATTTGGAGATGTGGGGTTTAAAGGATTTTGGACTTTGGAAATCCAAGTGACTCATCCGTTACGTGTGTATTCAGGTG
TGCAAATTTGCCAGATATTCTACCATACTGTGGAAGGGGAAATCAGCGAATACAAATCAGGAAAGTACCAAGCGAATCAA
GGGATCCAACCTTCCTTACTCTATAAAGACTTTGAAAAAAAGTAA

Upstream 100 bases:

>100_bases
ACAATTGTGTTATTCTGAAACGTTAACATCGAAAGATAGATTAGAAGCCTTACAAGCTTTCGCCGAAAAAAGAAAACCAA
TATTTAAGGGAGAATGAACT

Downstream 100 bases:

>100_bases
TTTTTACTTCTTATAACAAAAGTTACCTGCCAGCCAGTTTGGTCGGCAGGTGTTTGATCATTTCAATTATTTTTTAGTTT
TAAACGTACAATCCCATTTA

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MILTGKEILKRLGSDIKIEPYDEKLLNPNSYNLRLHEDLLVYSEFPLDMKKPNPVRTLKIPEEGLLLEPGNLYLGRTIEF
TETHNLVPMLEGRSSIGRLGMFVHITAGFGDVGFKGFWTLEIQVTHPLRVYSGVQICQIFYHTVEGEISEYKSGKYQANQ
GIQPSLLYKDFEKK

Sequences:

>Translated_174_residues
MILTGKEILKRLGSDIKIEPYDEKLLNPNSYNLRLHEDLLVYSEFPLDMKKPNPVRTLKIPEEGLLLEPGNLYLGRTIEF
TETHNLVPMLEGRSSIGRLGMFVHITAGFGDVGFKGFWTLEIQVTHPLRVYSGVQICQIFYHTVEGEISEYKSGKYQANQ
GIQPSLLYKDFEKK
>Mature_174_residues
MILTGKEILKRLGSDIKIEPYDEKLLNPNSYNLRLHEDLLVYSEFPLDMKKPNPVRTLKIPEEGLLLEPGNLYLGRTIEF
TETHNLVPMLEGRSSIGRLGMFVHITAGFGDVGFKGFWTLEIQVTHPLRVYSGVQICQIFYHTVEGEISEYKSGKYQANQ
GIQPSLLYKDFEKK

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_LEPBA (B0SH49)

Other databases:

- EMBL:   CP000777
- RefSeq:   YP_001964181.1
- ProteinModelPortal:   B0SH49
- SMR:   B0SH49
- GeneID:   6389227
- GenomeReviews:   CP000777_GR
- KEGG:   lbf:LBF_3134
- HOGENOM:   HBG553199
- OMA:   HQTAGWI
- ProtClustDB:   PRK00416
- BioCyc:   LBIF355278:LBF_3134-MONOMER
- HAMAP:   MF_00146
- InterPro:   IPR011962
- TIGRFAMs:   TIGR02274

Pfam domain/function: NA

EC number: =3.5.4.13

Molecular weight: Translated: 19933; Mature: 19933

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTGKEILKRLGSDIKIEPYDEKLLNPNSYNLRLHEDLLVYSEFPLDMKKPNPVRTLKI
CEECHHHHHHHCCCCCEECCCHHHHCCCCCCEEEECCEEEEEECCCCCCCCCCCEEEEEE
PEEGLLLEPGNLYLGRTIEFTETHNLVPMLEGRSSIGRLGMFVHITAGFGDVGFKGFWTL
CCCCCEECCCCEEEEEEEEECCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEEE
EIQVTHPLRVYSGVQICQIFYHTVEGEISEYKSGKYQANQGIQPSLLYKDFEKK
EEEEECCEEECCCHHHHHHHHHHHCCCHHHHCCCCEECCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MILTGKEILKRLGSDIKIEPYDEKLLNPNSYNLRLHEDLLVYSEFPLDMKKPNPVRTLKI
CEECHHHHHHHCCCCCEECCCHHHHCCCCCCEEEECCEEEEEECCCCCCCCCCCEEEEEE
PEEGLLLEPGNLYLGRTIEFTETHNLVPMLEGRSSIGRLGMFVHITAGFGDVGFKGFWTL
CCCCCEECCCCEEEEEEEEECCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEEE
EIQVTHPLRVYSGVQICQIFYHTVEGEISEYKSGKYQANQGIQPSLLYKDFEKK
EEEEECCEEECCCHHHHHHHHHHHCCCHHHHCCCCEECCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA