| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222146
Identifier: 183222146
GI number: 183222146
Start: 2884624
End: 2886876
Strand: Direct
Name: 183222146
Synonym: LEPBI_I2789
Alternate gene names: NA
Gene position: 2884624-2886876 (Clockwise)
Preceding gene: 183222143
Following gene: 183222147
Centisome position: 80.14
GC content: 38.84
Gene sequence:
>2253_bases ATGCGCATTCTATCCTTTAGTTTGATTTTGCCCTTACTTTTTTTCTGCAAACCTCCAGACCTATCCAATGGGTGTGATCC AAATTCAAAATCCTATTTACTCGGTACCATCTTACGATATGTCACTTCTGATAATTCCCCTTCCTGTTTACCTTCGTTTT CGCCTTTCGATATTGATTATTGGGGAGTTTTCGGTGGAAGTGCCACAGTCAATTCTATGGAAATTTACGGCAATGAACTG ATCCTAGGTGGCTCTTTTAATGCCCTTGGACCTAACGTTGGTTCAACCTATTATCTTGATACGAATACAGGAAAAATTGT TTCTAATTTTGAATGTCCATTTTTGAAATTGAATGATTTGGCTAAGGTTGTTGTTTCCGATGGGAATGGTGGATTTTATA TAGCAGGAAATTTCACTTATGTAAGAGGAACTCCTATACAAAATGTGGTTCACATGTTACCAGACTGTAAAATAGATCCG AACTTTACACCAAATCCTGGATCTCCTCCCAACATCTATTCCATGGTTATGTTTGGCGACAAACTCTACATAGGTGGGGT CTTCAACTCTTGGGAAGGGAATGCTCGTAACAACTTAGTATCGATCAATCGTTTTTCTGGTGCTTTAGAATCTTTGGCAA TGGATGTAAATTCCGCTGTTGAAAAACTTTTAATATATGATCAAAAACTATACATAGCAGGTCAGTTTAGTACTGTCAAT GGATTTGCTCGGGATCGAATTGCAAGGATTGATTTATCAAACTCTACTTTAGATAGTTTTGTACCTTCTTCAGCTCTAAA CAGTACGGTTCGAGCGTTAGCTTTTGGAACCATTTCTGGAACTCCTGCGATCATCGTTGGCGGAGCATTTACAACTCCAA GAAATAATGTATTTGCTCTAGATCTTAACGGTACTGTGCTCGCTTGGGATCCAAATTTTAACGGTATTGTTGATGCTATC GCAGTCTCTGGACAAAAAGTATATGTCGGTGGCTCTTTTACCGCTGTGAATGGTGGAACTGCTAGGCCCAATTTTGCTGT TGTAGATTCTAATACCGGAACAGACATAGGCATTAATTACGCTTTGAACGGGAATGTCCACCAAGTGATTGAATCCAATG GCCAAATCTATTTGTTTGGATCGTTTACATCTGTGTTAGGTGAAAATAGAAATTATGGCGCAAGTATTGATTCCAATACC AATTCGATAAGAGAATGGAACCCTAGATTTTTGAATCCATTCTCTTATCCCTCTGCTTCCGCTGGATTTTCGTTAGATGG AAGTCGTATTATGATTCCAGGAGGAAATGGTACTGTCAATTATGTGGATCGTTCAAACATTGCTTCAGTTTATTTAGATT CAGGTTTACCAACGAATTGGGCTCCATCCATTGACAATGAAGTAGCTGTTCTCCATATTAAAAATGATCATTTATTCATA GGTGGATATTTTGCAACAATCAGTGGCCTGTCACGAACAAGATTAGCTGCATTTCGTTTGCCATCCTATGAACTCTCCTC TTTCAATCCCACCATAACAACTGGAAATGTAACTCAATTGATATCCGATGAGACTAATTTTTATTTTGCTGGGACTTTTA CGACCGTCAGTGGTTCAGCTAGAAGTAATGCGGCAGCATATTCTCTGGACAATTTTTCTCTAACTAATTGGGCTCCTGAT CCAAACAACCAAGTGAGTTCCATCTTAGATTTAGGTGATTCAATATTGTTAGGTGGCCTTTTCAATACAGCCGGTGGAAG CGCATCAAGTTTTATACGAGCGGTGAATAAATCAGATGGATTGGCGATTAGTATTCCAACCTCTTTTCCAGATTCAGATG TCTCTGGCTTCGCATCATACAACGGAATCATTTATGTAGGTGGAAACTTCTCTACCATTGGAGGTTCCAACAATCAATAT TTGGCAAGTTTCACAAAAGGGACAGGTGTATTTGAATCCAACAAATTCCAGTTAAATGGAGGAGTATTTTATCAAATGAT TATCAGTAACGATGGTTTGATGGTCTTACATGGTGGATTCACGTCAGTCAATACGACAAACGCATCTGGTACTGCTTTTA TCAATTTAAATACAAATCAAATAAAGGCATGGGAGGTGACACAAACTGGAGTGACATTTAACCAAAAACTATTTGGCAAA TATTTGTTCATTGGTGGGAATATCACGGAACGAGGTAACCAACCATTTGGCGGTTACCACCGCATTGAACTTCCGAAACT AGAATCATTCTAG
Upstream 100 bases:
>100_bases GAAGAAGATTAGAAGATTCCCTTAAGGCTCTATTCCCCCAGAACCTGAGGAGTCCTGAAATTGAACTAGAAAGAAATTGA CGAGATTCTAAAATTGTTAC
Downstream 100 bases:
>100_bases TCAAAGAAGAAAATTTAAAAAAATCCTACTCCAAAATAAGTTTCCCAATTTAGATTTTTTTGGGAATATTCGTCATATAG GATACCCTGTATACTATATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 750; Mature: 750
Protein sequence:
>750_residues MRILSFSLILPLLFFCKPPDLSNGCDPNSKSYLLGTILRYVTSDNSPSCLPSFSPFDIDYWGVFGGSATVNSMEIYGNEL ILGGSFNALGPNVGSTYYLDTNTGKIVSNFECPFLKLNDLAKVVVSDGNGGFYIAGNFTYVRGTPIQNVVHMLPDCKIDP NFTPNPGSPPNIYSMVMFGDKLYIGGVFNSWEGNARNNLVSINRFSGALESLAMDVNSAVEKLLIYDQKLYIAGQFSTVN GFARDRIARIDLSNSTLDSFVPSSALNSTVRALAFGTISGTPAIIVGGAFTTPRNNVFALDLNGTVLAWDPNFNGIVDAI AVSGQKVYVGGSFTAVNGGTARPNFAVVDSNTGTDIGINYALNGNVHQVIESNGQIYLFGSFTSVLGENRNYGASIDSNT NSIREWNPRFLNPFSYPSASAGFSLDGSRIMIPGGNGTVNYVDRSNIASVYLDSGLPTNWAPSIDNEVAVLHIKNDHLFI GGYFATISGLSRTRLAAFRLPSYELSSFNPTITTGNVTQLISDETNFYFAGTFTTVSGSARSNAAAYSLDNFSLTNWAPD PNNQVSSILDLGDSILLGGLFNTAGGSASSFIRAVNKSDGLAISIPTSFPDSDVSGFASYNGIIYVGGNFSTIGGSNNQY LASFTKGTGVFESNKFQLNGGVFYQMIISNDGLMVLHGGFTSVNTTNASGTAFINLNTNQIKAWEVTQTGVTFNQKLFGK YLFIGGNITERGNQPFGGYHRIELPKLESF
Sequences:
>Translated_750_residues MRILSFSLILPLLFFCKPPDLSNGCDPNSKSYLLGTILRYVTSDNSPSCLPSFSPFDIDYWGVFGGSATVNSMEIYGNEL ILGGSFNALGPNVGSTYYLDTNTGKIVSNFECPFLKLNDLAKVVVSDGNGGFYIAGNFTYVRGTPIQNVVHMLPDCKIDP NFTPNPGSPPNIYSMVMFGDKLYIGGVFNSWEGNARNNLVSINRFSGALESLAMDVNSAVEKLLIYDQKLYIAGQFSTVN GFARDRIARIDLSNSTLDSFVPSSALNSTVRALAFGTISGTPAIIVGGAFTTPRNNVFALDLNGTVLAWDPNFNGIVDAI AVSGQKVYVGGSFTAVNGGTARPNFAVVDSNTGTDIGINYALNGNVHQVIESNGQIYLFGSFTSVLGENRNYGASIDSNT NSIREWNPRFLNPFSYPSASAGFSLDGSRIMIPGGNGTVNYVDRSNIASVYLDSGLPTNWAPSIDNEVAVLHIKNDHLFI GGYFATISGLSRTRLAAFRLPSYELSSFNPTITTGNVTQLISDETNFYFAGTFTTVSGSARSNAAAYSLDNFSLTNWAPD PNNQVSSILDLGDSILLGGLFNTAGGSASSFIRAVNKSDGLAISIPTSFPDSDVSGFASYNGIIYVGGNFSTIGGSNNQY LASFTKGTGVFESNKFQLNGGVFYQMIISNDGLMVLHGGFTSVNTTNASGTAFINLNTNQIKAWEVTQTGVTFNQKLFGK YLFIGGNITERGNQPFGGYHRIELPKLESF >Mature_750_residues MRILSFSLILPLLFFCKPPDLSNGCDPNSKSYLLGTILRYVTSDNSPSCLPSFSPFDIDYWGVFGGSATVNSMEIYGNEL ILGGSFNALGPNVGSTYYLDTNTGKIVSNFECPFLKLNDLAKVVVSDGNGGFYIAGNFTYVRGTPIQNVVHMLPDCKIDP NFTPNPGSPPNIYSMVMFGDKLYIGGVFNSWEGNARNNLVSINRFSGALESLAMDVNSAVEKLLIYDQKLYIAGQFSTVN GFARDRIARIDLSNSTLDSFVPSSALNSTVRALAFGTISGTPAIIVGGAFTTPRNNVFALDLNGTVLAWDPNFNGIVDAI AVSGQKVYVGGSFTAVNGGTARPNFAVVDSNTGTDIGINYALNGNVHQVIESNGQIYLFGSFTSVLGENRNYGASIDSNT NSIREWNPRFLNPFSYPSASAGFSLDGSRIMIPGGNGTVNYVDRSNIASVYLDSGLPTNWAPSIDNEVAVLHIKNDHLFI GGYFATISGLSRTRLAAFRLPSYELSSFNPTITTGNVTQLISDETNFYFAGTFTTVSGSARSNAAAYSLDNFSLTNWAPD PNNQVSSILDLGDSILLGGLFNTAGGSASSFIRAVNKSDGLAISIPTSFPDSDVSGFASYNGIIYVGGNFSTIGGSNNQY LASFTKGTGVFESNKFQLNGGVFYQMIISNDGLMVLHGGFTSVNTTNASGTAFINLNTNQIKAWEVTQTGVTFNQKLFGK YLFIGGNITERGNQPFGGYHRIELPKLESF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80302; Mature: 80302
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS01228 COF_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILSFSLILPLLFFCKPPDLSNGCDPNSKSYLLGTILRYVTSDNSPSCLPSFSPFDIDY CEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEE WGVFGGSATVNSMEIYGNELILGGSFNALGPNVGSTYYLDTNTGKIVSNFECPFLKLNDL EEEECCCCEEEEEEEECCEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCEEEECCE AKVVVSDGNGGFYIAGNFTYVRGTPIQNVVHMLPDCKIDPNFTPNPGSPPNIYSMVMFGD EEEEEECCCCCEEEEEEEEEEECCCHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEEECC KLYIGGVFNSWEGNARNNLVSINRFSGALESLAMDVNSAVEKLLIYDQKLYIAGQFSTVN EEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEEECCCC GFARDRIARIDLSNSTLDSFVPSSALNSTVRALAFGTISGTPAIIVGGAFTTPRNNVFAL CHHHCEEEEEECCCCCHHHHCCCHHHHHHHHEEEEEECCCCCEEEECCCEECCCCCEEEE DLNGTVLAWDPNFNGIVDAIAVSGQKVYVGGSFTAVNGGTARPNFAVVDSNTGTDIGINY ECCCEEEEECCCCCCCEEEEEECCCEEEECCEEEEECCCCCCCCEEEEECCCCCEEEEEE ALNGNVHQVIESNGQIYLFGSFTSVLGENRNYGASIDSNTNSIREWNPRFLNPFSYPSAS EECCCHHHHHHCCCCEEEEECHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC AGFSLDGSRIMIPGGNGTVNYVDRSNIASVYLDSGLPTNWAPSIDNEVAVLHIKNDHLFI CCCEECCCEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEE GGYFATISGLSRTRLAAFRLPSYELSSFNPTITTGNVTQLISDETNFYFAGTFTTVSGSA EEEEEECCCCCHHEEEEEECCCCCCCCCCCEEECCCEEEEECCCCCEEEEEEEEEECCCC RSNAAAYSLDNFSLTNWAPDPNNQVSSILDLGDSILLGGLFNTAGGSASSFIRAVNKSDG CCCCEEEEECCCEECCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCC LAISIPTSFPDSDVSGFASYNGIIYVGGNFSTIGGSNNQYLASFTKGTGVFESNKFQLNG EEEEECCCCCCCCCCCCEECCCEEEECCCEEECCCCCCCEEEEEECCCCEEECCEEEECC GVFYQMIISNDGLMVLHGGFTSVNTTNASGTAFINLNTNQIKAWEVTQTGVTFNQKLFGK CEEEEEEEECCCEEEEECCCCEEECCCCCCEEEEEECCCEEEEEEEEECCCEECHHHCEE YLFIGGNITERGNQPFGGYHRIELPKLESF EEEECCCCCCCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure MRILSFSLILPLLFFCKPPDLSNGCDPNSKSYLLGTILRYVTSDNSPSCLPSFSPFDIDY CEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEE WGVFGGSATVNSMEIYGNELILGGSFNALGPNVGSTYYLDTNTGKIVSNFECPFLKLNDL EEEECCCCEEEEEEEECCEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCEEEECCE AKVVVSDGNGGFYIAGNFTYVRGTPIQNVVHMLPDCKIDPNFTPNPGSPPNIYSMVMFGD EEEEEECCCCCEEEEEEEEEEECCCHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEEECC KLYIGGVFNSWEGNARNNLVSINRFSGALESLAMDVNSAVEKLLIYDQKLYIAGQFSTVN EEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEEECCCC GFARDRIARIDLSNSTLDSFVPSSALNSTVRALAFGTISGTPAIIVGGAFTTPRNNVFAL CHHHCEEEEEECCCCCHHHHCCCHHHHHHHHEEEEEECCCCCEEEECCCEECCCCCEEEE DLNGTVLAWDPNFNGIVDAIAVSGQKVYVGGSFTAVNGGTARPNFAVVDSNTGTDIGINY ECCCEEEEECCCCCCCEEEEEECCCEEEECCEEEEECCCCCCCCEEEEECCCCCEEEEEE ALNGNVHQVIESNGQIYLFGSFTSVLGENRNYGASIDSNTNSIREWNPRFLNPFSYPSAS EECCCHHHHHHCCCCEEEEECHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC AGFSLDGSRIMIPGGNGTVNYVDRSNIASVYLDSGLPTNWAPSIDNEVAVLHIKNDHLFI CCCEECCCEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEE GGYFATISGLSRTRLAAFRLPSYELSSFNPTITTGNVTQLISDETNFYFAGTFTTVSGSA EEEEEECCCCCHHEEEEEECCCCCCCCCCCEEECCCEEEEECCCCCEEEEEEEEEECCCC RSNAAAYSLDNFSLTNWAPDPNNQVSSILDLGDSILLGGLFNTAGGSASSFIRAVNKSDG CCCCEEEEECCCEECCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCC LAISIPTSFPDSDVSGFASYNGIIYVGGNFSTIGGSNNQYLASFTKGTGVFESNKFQLNG EEEEECCCCCCCCCCCCEECCCEEEECCCEEECCCCCCCEEEEEECCCCEEECCEEEECC GVFYQMIISNDGLMVLHGGFTSVNTTNASGTAFINLNTNQIKAWEVTQTGVTFNQKLFGK CEEEEEEEECCCEEEEECCCCEEECCCCCCEEEEEECCCEEEEEEEEECCCEECHHHCEE YLFIGGNITERGNQPFGGYHRIELPKLESF EEEECCCCCCCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA