| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222147
Identifier: 183222147
GI number: 183222147
Start: 2886990
End: 2888201
Strand: Direct
Name: 183222147
Synonym: LEPBI_I2790
Alternate gene names: NA
Gene position: 2886990-2888201 (Clockwise)
Preceding gene: 183222146
Following gene: 183222148
Centisome position: 80.2
GC content: 35.97
Gene sequence:
>1212_bases ATGAAACGTATTTTAGTCCTAGGAAGTAATTTTGCCGGCGTCACAGCAGCTATTTCCGTAAAAAGAAAACTTGGGAACGA AGTGGAAGTTTTGGTAATTTCACCTTCTCGTAATTTTTTATACGTACCTTCTCTGATATGGGTACCTTTTGGAATCCGCA AAGTCAAAGATATCACCTTTGCCGTAGAACCAATGTTAAACAAAAAAGGTGTAAAATTCATTCATGACAGAGGTGTAAAA GTAATACCAAATCGCAATGTAGTGATCACGGAAAAAAATGGAGAAATCAGTTACGATTACTTAGTCGTTGCAACAGGTGC TTCACTTAACTTTGATATTTTGCCAAACCTAAATCCAAAAGATAAAATGATCCAATGTATTGTCACACCTGAACTTGCAG AAAAATCTGCGATCGCATTTGAAGATTTAGTCAAAAACCCAGGTCCAGTGGTCGTTGCGGCAACACAAGGAGCAAGTTGT ATGGGTGCCGCTTATGAATATCTCTTCAATTTAGATAAATATCTTCGGGTAAGAGGAGTTCGCGATCAAGTGGATATTAC TTGGATCACTCCGGAACCATTTTTAGGTCATTTTGGGATCGGTGGTATTGTCGGAGGCCAAACAATGTTAGAAATCTTTA TGAAAATGTATGGTATCAAGTGGCATACGAACGCTACGATCAAAAAAATCGAAAAACACAATATTACATTAGGTGATGAT ACAAACATACCGTACAAAATGTCCATGATGATTCCTCCTTTCTTAGGAGCAGATGTCATGAAAAACTCGCCAGAACTAGT CGATGAAAAGGGTTTTGTTATCACTAATGAAGGTTATCAACATATAAATTTTAAGAATGTATATGCGGCAGGTCTTGCTG TAGAAGTCATTGCTCCTTTCAAAAAATCTGCTGCACCTTTTGGTGTACCTAAAACTGGATTCCCTTCGGATGTTATGGGT AAAATTGTCGCAGAGAACATTAAGAATGATATCAAAGGTAATGGAAAATTCAAAACAATGCCTTTCGGAAAAATTCCAGG GATTTGTATTATGGATGCTGGTAAAAAAGAAGTTTGGATCTTAACCAATCACCTATTCAAACCAAGACAATTTGAATTAA TGATCCCAAATATTTTTTATAATTTTGGTAAACTCATTTTAGAAAAATATATGTTGTGGAAAAATAAAAAGGGACTTGTA CAACTTCCGTAA
Upstream 100 bases:
>100_bases TTTAAAAAAATCCTACTCCAAAATAAGTTTCCCAATTTAGATTTTTTTGGGAATATTCGTCATATAGGATACCCTGTATA CTATATGACGAGGAAAAAAG
Downstream 100 bases:
>100_bases GGATCGATCAAATATTCCTTTGAATCTAAGAGAGGAAATCTAAAGTTGGTTCAGGATATTTGTCTTCTGGACCAAAATGG ATTTGAAACGTTGGGTTTTT
Product: putative sulfide quinone reductase
Products: NA
Alternate protein names: Sulfide-Quinone Reductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; SulfideQuinone Oxidoreductase; Pyridine Nucleotide-Disulphide Oxidoreductase; Sulfide Quinone Reductase; NAD(FAD)-Dependent Dehydrogenase; Sulfide-Quinone Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase Flavoprotein Subunit; Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Sulfide Dehydrogenase; Quinone Reductase; FAD Dependent Oxidoreductase; Sulfide Dehydrogenase Flavoprotein; Flavoprotein Reductase-Like Protein; Dehydrogenase; Sulfide-Quinone Reductase Related Protein; Flavoprotein Reductase Conjectural; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; Flavoprotein Reductase; Sulfide Dehydrogenase Related Protein
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MKRILVLGSNFAGVTAAISVKRKLGNEVEVLVISPSRNFLYVPSLIWVPFGIRKVKDITFAVEPMLNKKGVKFIHDRGVK VIPNRNVVITEKNGEISYDYLVVATGASLNFDILPNLNPKDKMIQCIVTPELAEKSAIAFEDLVKNPGPVVVAATQGASC MGAAYEYLFNLDKYLRVRGVRDQVDITWITPEPFLGHFGIGGIVGGQTMLEIFMKMYGIKWHTNATIKKIEKHNITLGDD TNIPYKMSMMIPPFLGADVMKNSPELVDEKGFVITNEGYQHINFKNVYAAGLAVEVIAPFKKSAAPFGVPKTGFPSDVMG KIVAENIKNDIKGNGKFKTMPFGKIPGICIMDAGKKEVWILTNHLFKPRQFELMIPNIFYNFGKLILEKYMLWKNKKGLV QLP
Sequences:
>Translated_403_residues MKRILVLGSNFAGVTAAISVKRKLGNEVEVLVISPSRNFLYVPSLIWVPFGIRKVKDITFAVEPMLNKKGVKFIHDRGVK VIPNRNVVITEKNGEISYDYLVVATGASLNFDILPNLNPKDKMIQCIVTPELAEKSAIAFEDLVKNPGPVVVAATQGASC MGAAYEYLFNLDKYLRVRGVRDQVDITWITPEPFLGHFGIGGIVGGQTMLEIFMKMYGIKWHTNATIKKIEKHNITLGDD TNIPYKMSMMIPPFLGADVMKNSPELVDEKGFVITNEGYQHINFKNVYAAGLAVEVIAPFKKSAAPFGVPKTGFPSDVMG KIVAENIKNDIKGNGKFKTMPFGKIPGICIMDAGKKEVWILTNHLFKPRQFELMIPNIFYNFGKLILEKYMLWKNKKGLV QLP >Mature_403_residues MKRILVLGSNFAGVTAAISVKRKLGNEVEVLVISPSRNFLYVPSLIWVPFGIRKVKDITFAVEPMLNKKGVKFIHDRGVK VIPNRNVVITEKNGEISYDYLVVATGASLNFDILPNLNPKDKMIQCIVTPELAEKSAIAFEDLVKNPGPVVVAATQGASC MGAAYEYLFNLDKYLRVRGVRDQVDITWITPEPFLGHFGIGGIVGGQTMLEIFMKMYGIKWHTNATIKKIEKHNITLGDD TNIPYKMSMMIPPFLGADVMKNSPELVDEKGFVITNEGYQHINFKNVYAAGLAVEVIAPFKKSAAPFGVPKTGFPSDVMG KIVAENIKNDIKGNGKFKTMPFGKIPGICIMDAGKKEVWILTNHLFKPRQFELMIPNIFYNFGKLILEKYMLWKNKKGLV QLP
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI10864011, Length=334, Percent_Identity=26.0479041916168, Blast_Score=85, Evalue=9e-17, Organism=Drosophila melanogaster, GI24657386, Length=306, Percent_Identity=24.1830065359477, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24657391, Length=306, Percent_Identity=24.1830065359477, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44916; Mature: 44916
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILVLGSNFAGVTAAISVKRKLGNEVEVLVISPSRNFLYVPSLIWVPFGIRKVKDITF CCEEEEECCCCCCEEEEEEEHHHCCCCEEEEEECCCCCEEEECHHEECCCCCHHHEEEEE AVEPMLNKKGVKFIHDRGVKVIPNRNVVITEKNGEISYDYLVVATGASLNFDILPNLNPK EECCCCCCCCCEEEECCCEEEECCCCEEEEECCCCEEEEEEEEEECCCEEEEECCCCCCH DKMIQCIVTPELAEKSAIAFEDLVKNPGPVVVAATQGASCMGAAYEYLFNLDKYLRVRGV HHEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC RDQVDITWITPEPFLGHFGIGGIVGGQTMLEIFMKMYGIKWHTNATIKKIEKHNITLGDD CCCEEEEEECCCCCCCCCCCCCEECHHHHHHHHHHHHCEEEECCCHHEEHHHCCEEECCC TNIPYKMSMMIPPFLGADVMKNSPELVDEKGFVITNEGYQHINFKNVYAAGLAVEVIAPF CCCCEEEEEECCCCCCHHHHCCCCCCCCCCCEEEECCCCEECCCCCEEECCEEEEEECCH KKSAAPFGVPKTGFPSDVMGKIVAENIKNDIKGNGKFKTMPFGKIPGICIMDAGKKEVWI HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCEEEE LTNHLFKPRQFELMIPNIFYNFGKLILEKYMLWKNKKGLVQLP EECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCEECC >Mature Secondary Structure MKRILVLGSNFAGVTAAISVKRKLGNEVEVLVISPSRNFLYVPSLIWVPFGIRKVKDITF CCEEEEECCCCCCEEEEEEEHHHCCCCEEEEEECCCCCEEEECHHEECCCCCHHHEEEEE AVEPMLNKKGVKFIHDRGVKVIPNRNVVITEKNGEISYDYLVVATGASLNFDILPNLNPK EECCCCCCCCCEEEECCCEEEECCCCEEEEECCCCEEEEEEEEEECCCEEEEECCCCCCH DKMIQCIVTPELAEKSAIAFEDLVKNPGPVVVAATQGASCMGAAYEYLFNLDKYLRVRGV HHEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC RDQVDITWITPEPFLGHFGIGGIVGGQTMLEIFMKMYGIKWHTNATIKKIEKHNITLGDD CCCEEEEEECCCCCCCCCCCCCEECHHHHHHHHHHHHCEEEECCCHHEEHHHCCEEECCC TNIPYKMSMMIPPFLGADVMKNSPELVDEKGFVITNEGYQHINFKNVYAAGLAVEVIAPF CCCCEEEEEECCCCCCHHHHCCCCCCCCCCCEEEECCCCEECCCCCEEECCEEEEEECCH KKSAAPFGVPKTGFPSDVMGKIVAENIKNDIKGNGKFKTMPFGKIPGICIMDAGKKEVWI HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCEEEE LTNHLFKPRQFELMIPNIFYNFGKLILEKYMLWKNKKGLVQLP EECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA