| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is yjgR [H]
Identifier: 183221713
GI number: 183221713
Start: 2413530
End: 2415113
Strand: Direct
Name: yjgR [H]
Synonym: LEPBI_I2342
Alternate gene names: 183221713
Gene position: 2413530-2415113 (Clockwise)
Preceding gene: 183221711
Following gene: 183221714
Centisome position: 67.05
GC content: 45.27
Gene sequence:
>1584_bases ATGGCCAAACAATCCGATGCATTTACAAAAAAAATCCAGGAAGGATACCCAAGTGACGGGTCCCTTTTTTTAGGATGTGG AAAATTTGATGGGGACACTTTCCCTGAAGCCAAGGTCCAAATCCCCCTCTCCACCTTAAACCGACATGGTCTGATCGCCG GTGCCACGGGAACAGGAAAAACCAAAACCTTACAACTCCTCACAGAATCCCTTTCCGATGCGGGTGTGCCCGTTGTCCTT ATGGACATCAAAGGAGACCTTTCTGGTCTTGCGGCAGAAGGCGAATCCAATGAAAAAATCGAAGAACGAACCAAGATCCT TGGTTCGGAATGGAATCCCACAACCTACCCCGTTGAATTTTTATCCATCTCCAAAGAACCAGGGGTCAAACTCCGTGCAA CAGTTGCCGAGTTTGGTCCGATTTTACTTTCTCGGATTTTGGAACTCAATGAAACACAAGGCAGTGTGGTTTCCCTTGTC TTTAAATACTGTGATGATTTGGGGCTTCCCATCCTTGACCTCAAGGATTTCAAAAAAGCACTCCAATACATCAATGACGA AGGCAAAGAGGAACTAGAAAAAGAATACGGCACTGTTTCCTCTCAAAGTGTTTCGATCATCTTACGAAAGTTAATGGATC TGGAAAGCCAAGGCGGGGAGGATTTTTTTGGTGAACCTTCGTTTGATGTGGATGACCTTATCCAAACAGAATCTAAAAAA GGGAAAATTTCCATTGTCAGGCTCACAGACATTCAAACCAAACCACGTCTTTTTTCTACATTTATGTTGTCTCTCCTCAC AGAGATTTATGCGAATTTTCCAGAAGAAGGTGATTTGGAGAAACCAAAACTAGTATTATTCATCGATGAAGCCCACTTGG TCTTTGATGAAGCTTCCAGTGATTTGTTAAAACAATTGGAAACAATGGTACGCCTCATCCGTTCCAAAGGTGTGGGAATT ATTTTTTGTACACAATCGCCAACCGATTTACCAAAGGAAATTTTAGGCCAATTGGGACTCAAAGTCCAACATGCCCTCCG CGCCTTCACAGCAAACGACCGCAAGGCGATCAAAACCGCTTCCGAAAATTATCCAGAAACGGATTTTTATGATACCAAAG AAGTGATCACAGAACTTGGGATTGGGGAGGCATTCATCACAGCCCTAAATACCAAAGGATCTCCCACTCCCCTCGTCCAC ACCTTTCTCTGTCCTCCCAAGTCTCGTATGGGAACTCTCACAACAAAGGAACTCGAAGGTTTGGTTGGAAAATCGGAACT AGTGAAAAAATACGAAACCACCCTCGATCGGGAAAGTGCTCACGAAATGCTCACTAAAAAGATGGAAACCATTGCCGACG AGACGGAATCGGCAGAAGAGGAAACGGGATCCAAAAAACCCAAATCCAAACGTGCCAAAGAAAAAGAAGACCCCAGTTTT GTGGAAACCCTCTCCAAAAACCCCCTCGCCAGAGAAGTAGGAAGGACCGTTGCCAAGGAAGTGACTCGGGGCCTACTCGG GATGCTCGGTGTCACCCCCAAGCGCGGCTCAAAACGCAAAAAAACAGGGCTTTTCGGGTTCTAA
Upstream 100 bases:
>100_bases AGGATCACTTGGAAATGCCGAGCGCATTGCCCACTCTCCGCTTAGAAAACATTGACTTAGTGGGGAATGAAAATGAACTA GTGGAGTTTCGAGGGAACCA
Downstream 100 bases:
>100_bases TTTCATTTTAGCACTCTTTGATTGAAAGTGCTTGACGAATCCTTCCTCCAATCATTCTATGGTACTTGAGTTTAGCACTC TTTTTGAAATGGTGCTAAAC
Product: putative ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 527; Mature: 526
Protein sequence:
>527_residues MAKQSDAFTKKIQEGYPSDGSLFLGCGKFDGDTFPEAKVQIPLSTLNRHGLIAGATGTGKTKTLQLLTESLSDAGVPVVL MDIKGDLSGLAAEGESNEKIEERTKILGSEWNPTTYPVEFLSISKEPGVKLRATVAEFGPILLSRILELNETQGSVVSLV FKYCDDLGLPILDLKDFKKALQYINDEGKEELEKEYGTVSSQSVSIILRKLMDLESQGGEDFFGEPSFDVDDLIQTESKK GKISIVRLTDIQTKPRLFSTFMLSLLTEIYANFPEEGDLEKPKLVLFIDEAHLVFDEASSDLLKQLETMVRLIRSKGVGI IFCTQSPTDLPKEILGQLGLKVQHALRAFTANDRKAIKTASENYPETDFYDTKEVITELGIGEAFITALNTKGSPTPLVH TFLCPPKSRMGTLTTKELEGLVGKSELVKKYETTLDRESAHEMLTKKMETIADETESAEEETGSKKPKSKRAKEKEDPSF VETLSKNPLAREVGRTVAKEVTRGLLGMLGVTPKRGSKRKKTGLFGF
Sequences:
>Translated_527_residues MAKQSDAFTKKIQEGYPSDGSLFLGCGKFDGDTFPEAKVQIPLSTLNRHGLIAGATGTGKTKTLQLLTESLSDAGVPVVL MDIKGDLSGLAAEGESNEKIEERTKILGSEWNPTTYPVEFLSISKEPGVKLRATVAEFGPILLSRILELNETQGSVVSLV FKYCDDLGLPILDLKDFKKALQYINDEGKEELEKEYGTVSSQSVSIILRKLMDLESQGGEDFFGEPSFDVDDLIQTESKK GKISIVRLTDIQTKPRLFSTFMLSLLTEIYANFPEEGDLEKPKLVLFIDEAHLVFDEASSDLLKQLETMVRLIRSKGVGI IFCTQSPTDLPKEILGQLGLKVQHALRAFTANDRKAIKTASENYPETDFYDTKEVITELGIGEAFITALNTKGSPTPLVH TFLCPPKSRMGTLTTKELEGLVGKSELVKKYETTLDRESAHEMLTKKMETIADETESAEEETGSKKPKSKRAKEKEDPSF VETLSKNPLAREVGRTVAKEVTRGLLGMLGVTPKRGSKRKKTGLFGF >Mature_526_residues AKQSDAFTKKIQEGYPSDGSLFLGCGKFDGDTFPEAKVQIPLSTLNRHGLIAGATGTGKTKTLQLLTESLSDAGVPVVLM DIKGDLSGLAAEGESNEKIEERTKILGSEWNPTTYPVEFLSISKEPGVKLRATVAEFGPILLSRILELNETQGSVVSLVF KYCDDLGLPILDLKDFKKALQYINDEGKEELEKEYGTVSSQSVSIILRKLMDLESQGGEDFFGEPSFDVDDLIQTESKKG KISIVRLTDIQTKPRLFSTFMLSLLTEIYANFPEEGDLEKPKLVLFIDEAHLVFDEASSDLLKQLETMVRLIRSKGVGII FCTQSPTDLPKEILGQLGLKVQHALRAFTANDRKAIKTASENYPETDFYDTKEVITELGIGEAFITALNTKGSPTPLVHT FLCPPKSRMGTLTTKELEGLVGKSELVKKYETTLDRESAHEMLTKKMETIADETESAEEETGSKKPKSKRAKEKEDPSFV ETLSKNPLAREVGRTVAKEVTRGLLGMLGVTPKRGSKRKKTGLFGF
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjiB [H]
Homologues:
Organism=Escherichia coli, GI1790714, Length=482, Percent_Identity=43.7759336099585, Blast_Score=377, Evalue=1e-105,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 [H]
Pfam domain/function: PF05872 DUF853 [H]
EC number: NA
Molecular weight: Translated: 58068; Mature: 57937
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKQSDAFTKKIQEGYPSDGSLFLGCGKFDGDTFPEAKVQIPLSTLNRHGLIAGATGTGK CCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEHHHHCCCCEEEECCCCCC TKTLQLLTESLSDAGVPVVLMDIKGDLSGLAAEGESNEKIEERTKILGSEWNPTTYPVEF HHHHHHHHHHHHCCCCCEEEEECCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCE LSISKEPGVKLRATVAEFGPILLSRILELNETQGSVVSLVFKYCDDLGLPILDLKDFKKA EEECCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH LQYINDEGKEELEKEYGTVSSQSVSIILRKLMDLESQGGEDFFGEPSFDVDDLIQTESKK HHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCC GKISIVRLTDIQTKPRLFSTFMLSLLTEIYANFPEEGDLEKPKLVLFIDEAHLVFDEASS CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHH DLLKQLETMVRLIRSKGVGIIFCTQSPTDLPKEILGQLGLKVQHALRAFTANDRKAIKTA HHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCHHHHHHHHHHHCCCHHHHHHH SENYPETDFYDTKEVITELGIGEAFITALNTKGSPTPLVHTFLCPPKSRMGTLTTKELEG HCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEEECCCHHHCCCCHHHHHHH LVGKSELVKKYETTLDRESAHEMLTKKMETIADETESAEEETGSKKPKSKRAKEKEDPSF HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHH VETLSKNPLAREVGRTVAKEVTRGLLGMLGVTPKRGSKRKKTGLFGF HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AKQSDAFTKKIQEGYPSDGSLFLGCGKFDGDTFPEAKVQIPLSTLNRHGLIAGATGTGK CCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEHHHHCCCCEEEECCCCCC TKTLQLLTESLSDAGVPVVLMDIKGDLSGLAAEGESNEKIEERTKILGSEWNPTTYPVEF HHHHHHHHHHHHCCCCCEEEEECCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCE LSISKEPGVKLRATVAEFGPILLSRILELNETQGSVVSLVFKYCDDLGLPILDLKDFKKA EEECCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH LQYINDEGKEELEKEYGTVSSQSVSIILRKLMDLESQGGEDFFGEPSFDVDDLIQTESKK HHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCC GKISIVRLTDIQTKPRLFSTFMLSLLTEIYANFPEEGDLEKPKLVLFIDEAHLVFDEASS CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHH DLLKQLETMVRLIRSKGVGIIFCTQSPTDLPKEILGQLGLKVQHALRAFTANDRKAIKTA HHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCHHHHHHHHHHHCCCHHHHHHH SENYPETDFYDTKEVITELGIGEAFITALNTKGSPTPLVHTFLCPPKSRMGTLTTKELEG HCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEEECCCHHHCCCCHHHHHHH LVGKSELVKKYETTLDRESAHEMLTKKMETIADETESAEEETGSKKPKSKRAKEKEDPSF HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHH VETLSKNPLAREVGRTVAKEVTRGLLGMLGVTPKRGSKRKKTGLFGF HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]