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The map label for this gene is yfnF [H]

Identifier: 183221393

GI number: 183221393

Start: 2092263

End: 2093696

Strand: Reverse

Name: yfnF [H]

Synonym: LEPBI_I2011

Alternate gene names: 183221393

Gene position: 2093696-2092263 (Counterclockwise)

Preceding gene: 183221394

Following gene: 183221392

Centisome position: 58.16

GC content: 32.64

Gene sequence:

>1434_bases
ATGTCCATTAATTATTATTGTACATTATTTGATACGAACTACTTGCTTCGTGCAGTTTCGATGCTCCGATCCTTGGCTGA
TAAAGATCCTACGGCAAAGGTTTTTGTGTTTCCATTTGATAATGAATGTTATAAATCTCTTGAAAAATTGAATTTAGATT
TTGTGCAATTGGTTTCTTTGGGAGAATTTGAATCTCCCGAATTACTTCGCGTTAAAAAGGAAAGAACAAAAGGGGAATAC
TGCTGGACATGCACTCCTTGGATCATTCGTTTTTGTATTGATCGGTTTCAGTTAGAGCATTGCACATATGTCGATGCAGA
TTTATTTTTCTTCTCTAATCCTCAAGTTTTATTGGATGAGGCTAAGAATTCTTCTGTCCTCATCACTGAACATCGTTACT
CTCCTGAATATGATCAATCTGAAACTGCAGGAATTTATTGTGTTCAGTTCGTTTTATTTCGAAATGACGTCGATGGGATG
CGTATATTACATTGGTGGGCGGATCGTTGTCTTGAATGGTGTTATTCTCGTTTCGAAGATGGAAAGTTTGGGGACCAGAA
ATACTTAGACCATTGGGTTACCGAATTCAATCGAGTCCACGTATTAGAACACCTTGGTGGTGGAGTTGCTCCTTGGAATG
TTCAGCAATATGAATTTGTTTCAGATAACCATGAAATCATTTTGAAAGAAAAAAGATCAAATAAACAATTTTCAGTTATA
TTTTACCATTTTCATGACGTAAAAATTGTTGAGAATAGGCTTAGATTTTTTTCAAATTATTACTCTATCCATGAAGATAT
TTATTCATCTATATATAACAAATATTCTGAATTTCTAAATAAAAATTTTCACCAACTTCAATCTAGACATATTCAATCGG
AAACTGTTAGTCTAATTCTCAATGATCTTGCTAACTCTTTAAATAACTATAAAGCAATTAAATCTGGCTCCCTTTCCGAA
ACATATATATATATTACAAAGAATGGAAACGAAAGTTTGCAGACAATGCATAAGTTTAATTTTCCCTGCTCTGCTGAATT
CCAAGATTTTTCTTTTTTAGTTTCGTTAAATGAATATAGCAAAGACGGTGAAAATATTTCCGGCATTACCATCGTTCCTT
CCAGGGGAAGCTCTATAGAATTTGTTCTTCAATCTGTTTCAATCATTGGTTTGAGTTTAAAAGATGAAAAAGTTGAATGC
AATTTAGATGAAAAATATATAAATAAATTTGCAAAAGGAAATTGGCAGAAAAGAAAAGGAAGTTCTTTTTCTTTTTATTC
TGCCAATGGATTTCTTAAATTGCCTATAAGTATGAAGACAATGATTGATATAAAATTTAATGGCCGTTGGAGACTGATAA
GTCAGATCGAATCAGCTATCGAAATTTCGAAGTTAAGTTTTTCAAAGCGAATTCTAAAGAGATTTGGATTGTAG

Upstream 100 bases:

>100_bases
AATTCATGAAACGGAACTTAGTTTGCCAATTTCTTTTATTCATTCAAAATCCGAAATCGAACGAGTTGTTGAACTTTTAA
ATAGGTGGCAAAATTAATTA

Downstream 100 bases:

>100_bases
GTTTTTATGATTCTATTTGATTTTCAAACTTTTTTAAATCAAAAATACGGTGGAATTTCTCGTTTGTTTGTCGAAGTAAT
GGATTATCTCAGCAAACATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MSINYYCTLFDTNYLLRAVSMLRSLADKDPTAKVFVFPFDNECYKSLEKLNLDFVQLVSLGEFESPELLRVKKERTKGEY
CWTCTPWIIRFCIDRFQLEHCTYVDADLFFFSNPQVLLDEAKNSSVLITEHRYSPEYDQSETAGIYCVQFVLFRNDVDGM
RILHWWADRCLEWCYSRFEDGKFGDQKYLDHWVTEFNRVHVLEHLGGGVAPWNVQQYEFVSDNHEIILKEKRSNKQFSVI
FYHFHDVKIVENRLRFFSNYYSIHEDIYSSIYNKYSEFLNKNFHQLQSRHIQSETVSLILNDLANSLNNYKAIKSGSLSE
TYIYITKNGNESLQTMHKFNFPCSAEFQDFSFLVSLNEYSKDGENISGITIVPSRGSSIEFVLQSVSIIGLSLKDEKVEC
NLDEKYINKFAKGNWQKRKGSSFSFYSANGFLKLPISMKTMIDIKFNGRWRLISQIESAIEISKLSFSKRILKRFGL

Sequences:

>Translated_477_residues
MSINYYCTLFDTNYLLRAVSMLRSLADKDPTAKVFVFPFDNECYKSLEKLNLDFVQLVSLGEFESPELLRVKKERTKGEY
CWTCTPWIIRFCIDRFQLEHCTYVDADLFFFSNPQVLLDEAKNSSVLITEHRYSPEYDQSETAGIYCVQFVLFRNDVDGM
RILHWWADRCLEWCYSRFEDGKFGDQKYLDHWVTEFNRVHVLEHLGGGVAPWNVQQYEFVSDNHEIILKEKRSNKQFSVI
FYHFHDVKIVENRLRFFSNYYSIHEDIYSSIYNKYSEFLNKNFHQLQSRHIQSETVSLILNDLANSLNNYKAIKSGSLSE
TYIYITKNGNESLQTMHKFNFPCSAEFQDFSFLVSLNEYSKDGENISGITIVPSRGSSIEFVLQSVSIIGLSLKDEKVEC
NLDEKYINKFAKGNWQKRKGSSFSFYSANGFLKLPISMKTMIDIKFNGRWRLISQIESAIEISKLSFSKRILKRFGL
>Mature_476_residues
SINYYCTLFDTNYLLRAVSMLRSLADKDPTAKVFVFPFDNECYKSLEKLNLDFVQLVSLGEFESPELLRVKKERTKGEYC
WTCTPWIIRFCIDRFQLEHCTYVDADLFFFSNPQVLLDEAKNSSVLITEHRYSPEYDQSETAGIYCVQFVLFRNDVDGMR
ILHWWADRCLEWCYSRFEDGKFGDQKYLDHWVTEFNRVHVLEHLGGGVAPWNVQQYEFVSDNHEIILKEKRSNKQFSVIF
YHFHDVKIVENRLRFFSNYYSIHEDIYSSIYNKYSEFLNKNFHQLQSRHIQSETVSLILNDLANSLNNYKAIKSGSLSET
YIYITKNGNESLQTMHKFNFPCSAEFQDFSFLVSLNEYSKDGENISGITIVPSRGSSIEFVLQSVSIIGLSLKDEKVECN
LDEKYINKFAKGNWQKRKGSSFSFYSANGFLKLPISMKTMIDIKFNGRWRLISQIESAIEISKLSFSKRILKRFGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005069 [H]

Pfam domain/function: PF03407 Nucleotid_trans [H]

EC number: NA

Molecular weight: Translated: 56031; Mature: 55900

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINYYCTLFDTNYLLRAVSMLRSLADKDPTAKVFVFPFDNECYKSLEKLNLDFVQLVSL
CCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHC
GEFESPELLRVKKERTKGEYCWTCTPWIIRFCIDRFQLEHCTYVDADLFFFSNPQVLLDE
CCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCEEECCEEEEECCCCEEEEC
AKNSSVLITEHRYSPEYDQSETAGIYCVQFVLFRNDVDGMRILHWWADRCLEWCYSRFED
CCCCCEEEEECCCCCCCCCCCCCHHEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCC
GKFGDQKYLDHWVTEFNRVHVLEHLGGGVAPWNVQQYEFVSDNHEIILKEKRSNKQFSVI
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEE
FYHFHDVKIVENRLRFFSNYYSIHEDIYSSIYNKYSEFLNKNFHQLQSRHIQSETVSLIL
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
NDLANSLNNYKAIKSGSLSETYIYITKNGNESLQTMHKFNFPCSAEFQDFSFLVSLNEYS
HHHHHHHHHCCHHCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEHHHC
KDGENISGITIVPSRGSSIEFVLQSVSIIGLSLKDEKVECNLDEKYINKFAKGNWQKRKG
CCCCCCCCEEEECCCCCHHHHHHHHHHHEEEEEECCCEECCCCHHHHHHHHCCCCCCCCC
SSFSFYSANGFLKLPISMKTMIDIKFNGRWRLISQIESAIEISKLSFSKRILKRFGL
CCEEEEECCCEEECCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SINYYCTLFDTNYLLRAVSMLRSLADKDPTAKVFVFPFDNECYKSLEKLNLDFVQLVSL
CEEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHC
GEFESPELLRVKKERTKGEYCWTCTPWIIRFCIDRFQLEHCTYVDADLFFFSNPQVLLDE
CCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCEEECCEEEEECCCCEEEEC
AKNSSVLITEHRYSPEYDQSETAGIYCVQFVLFRNDVDGMRILHWWADRCLEWCYSRFED
CCCCCEEEEECCCCCCCCCCCCCHHEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCC
GKFGDQKYLDHWVTEFNRVHVLEHLGGGVAPWNVQQYEFVSDNHEIILKEKRSNKQFSVI
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEE
FYHFHDVKIVENRLRFFSNYYSIHEDIYSSIYNKYSEFLNKNFHQLQSRHIQSETVSLIL
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
NDLANSLNNYKAIKSGSLSETYIYITKNGNESLQTMHKFNFPCSAEFQDFSFLVSLNEYS
HHHHHHHHHCCHHCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEHHHC
KDGENISGITIVPSRGSSIEFVLQSVSIIGLSLKDEKVECNLDEKYINKFAKGNWQKRKG
CCCCCCCCEEEECCCCCHHHHHHHHHHHEEEEEECCCEECCCCHHHHHHHHCCCCCCCCC
SSFSFYSANGFLKLPISMKTMIDIKFNGRWRLISQIESAIEISKLSFSKRILKRFGL
CCEEEEECCCEEECCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]