| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221392
Identifier: 183221392
GI number: 183221392
Start: 2091045
End: 2092256
Strand: Reverse
Name: 183221392
Synonym: LEPBI_I2010
Alternate gene names: NA
Gene position: 2092256-2091045 (Counterclockwise)
Preceding gene: 183221393
Following gene: 183221391
Centisome position: 58.12
GC content: 31.44
Gene sequence:
>1212_bases ATGATTCTATTTGATTTTCAAACTTTTTTAAATCAAAAATACGGTGGAATTTCTCGTTTGTTTGTCGAAGTAATGGATTA TCTCAGCAAACATGATAGCGAGTTTGAATTACCACTTGTATCCTCCGAAAATGTGAATTTAATTGGAAAGGATTTCTATA AGCCAATTTTTAAAATAAAGTATGCTTTGGAAGTTCCTGAAATTGAAACTTGGCTTTCGGGCAAAAGTTTTTCAGGAAAG ACATTTCTTTATTCATTATATAAGTCATTCAAAAAACTCCAAAATAAGTTGGTTATCAGGTTTTTAAATAGAAGAAATCA GAAACTGATTACTAAGAAATTGTTGGATCAAAAATTTAAAGTTTTTCATCCAACGTATTTTGATAATTACTATTTAGATC AAATTTCGAAAGGTCCAAATAAATTTGTCATCACAATTTTTGATTTGATTCACGAACGTTTTCCCGGTTATTATAAGCTG GATGATATAGCTTTACGAAACCGAAAATCGCTTTGTTATGCGGCGGATAGAATCATTGCAATTTCGAAATCAACCAAAAA TGATTTAATGGAGTTTTATGGTATTCCAAATGATAAAATCGAAGTCATTCATTTGGCCTCTAATTTGCATTTGGCTTTTG ATTTAGAATCTAATCTGATTTGGAAAAATTATATTCTATTTGTTGGAGAAAGGGGTGGCTATAAAAATTTCAATAACTTT GTGCACGGAGTTTCTCCCATTATACAAAAATATAAGGTAAATCTAATTTTTGCTGGAGGTGGTAAATTTACTCATGAAGA AAAAGAAACTCTTAAAAAAGCCAATGTCTTGGGAAAATCACTTCAGATTCCTTTTCAATCTGATTCGGAAATAAAACAAC TTTACCAAAATGCTTTGGTATTTGTATTTCCTTCTATGTATGAAGGATTTGGAATTCCGCTCTTAGAATCTATGTCACTC GGTTGTCCAGTCGCATGTAGTAATACTAGTTCATTTCCCGAGGTAGTTGGTGACGCAGCTGTAACTTTTGATCCATGGTA TCCTGAATCGATTAGAGATTCTGTCGATCGATTATTTAATTCTGAATCGTTGCGACTAAAAATGATTGCTAGAGGAAAAG AGCGATCGAAACAATTTTCTTGGGAAAAAACTGGTGAAAAACATCTGAAAATCTATAATCAATTATTGGCATCTTCTTTT GAATCCAAATAA
Upstream 100 bases:
>100_bases TGGCCGTTGGAGACTGATAAGTCAGATCGAATCAGCTATCGAAATTTCGAAGTTAAGTTTTTCAAAGCGAATTCTAAAGA GATTTGGATTGTAGGTTTTT
Downstream 100 bases:
>100_bases CATACCTATCATAACAATTGTCACTCCATCCTTCAACCAAGGTGCTTTTATTTCCGAAACACTAAATTCTGTAATAGAAC AAGAAGGTTCGTTTTTTATT
Product: putative glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MILFDFQTFLNQKYGGISRLFVEVMDYLSKHDSEFELPLVSSENVNLIGKDFYKPIFKIKYALEVPEIETWLSGKSFSGK TFLYSLYKSFKKLQNKLVIRFLNRRNQKLITKKLLDQKFKVFHPTYFDNYYLDQISKGPNKFVITIFDLIHERFPGYYKL DDIALRNRKSLCYAADRIIAISKSTKNDLMEFYGIPNDKIEVIHLASNLHLAFDLESNLIWKNYILFVGERGGYKNFNNF VHGVSPIIQKYKVNLIFAGGGKFTHEEKETLKKANVLGKSLQIPFQSDSEIKQLYQNALVFVFPSMYEGFGIPLLESMSL GCPVACSNTSSFPEVVGDAAVTFDPWYPESIRDSVDRLFNSESLRLKMIARGKERSKQFSWEKTGEKHLKIYNQLLASSF ESK
Sequences:
>Translated_403_residues MILFDFQTFLNQKYGGISRLFVEVMDYLSKHDSEFELPLVSSENVNLIGKDFYKPIFKIKYALEVPEIETWLSGKSFSGK TFLYSLYKSFKKLQNKLVIRFLNRRNQKLITKKLLDQKFKVFHPTYFDNYYLDQISKGPNKFVITIFDLIHERFPGYYKL DDIALRNRKSLCYAADRIIAISKSTKNDLMEFYGIPNDKIEVIHLASNLHLAFDLESNLIWKNYILFVGERGGYKNFNNF VHGVSPIIQKYKVNLIFAGGGKFTHEEKETLKKANVLGKSLQIPFQSDSEIKQLYQNALVFVFPSMYEGFGIPLLESMSL GCPVACSNTSSFPEVVGDAAVTFDPWYPESIRDSVDRLFNSESLRLKMIARGKERSKQFSWEKTGEKHLKIYNQLLASSF ESK >Mature_403_residues MILFDFQTFLNQKYGGISRLFVEVMDYLSKHDSEFELPLVSSENVNLIGKDFYKPIFKIKYALEVPEIETWLSGKSFSGK TFLYSLYKSFKKLQNKLVIRFLNRRNQKLITKKLLDQKFKVFHPTYFDNYYLDQISKGPNKFVITIFDLIHERFPGYYKL DDIALRNRKSLCYAADRIIAISKSTKNDLMEFYGIPNDKIEVIHLASNLHLAFDLESNLIWKNYILFVGERGGYKNFNNF VHGVSPIIQKYKVNLIFAGGGKFTHEEKETLKKANVLGKSLQIPFQSDSEIKQLYQNALVFVFPSMYEGFGIPLLESMSL GCPVACSNTSSFPEVVGDAAVTFDPWYPESIRDSVDRLFNSESLRLKMIARGKERSKQFSWEKTGEKHLKIYNQLLASSF ESK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 46718; Mature: 46718
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILFDFQTFLNQKYGGISRLFVEVMDYLSKHDSEFELPLVSSENVNLIGKDFYKPIFKIK CEEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEHHHHHHHHHHEE YALEVPEIETWLSGKSFSGKTFLYSLYKSFKKLQNKLVIRFLNRRNQKLITKKLLDQKFK EEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VFHPTYFDNYYLDQISKGPNKFVITIFDLIHERFPGYYKLDDIALRNRKSLCYAADRIIA HCCCCCCCCHHHHHHCCCCCEEEEHHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHCEEEE ISKSTKNDLMEFYGIPNDKIEVIHLASNLHLAFDLESNLIWKNYILFVGERGGYKNFNNF EECCCHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCCEEEEEEEEEEECCCCCCCHHHH VHGVSPIIQKYKVNLIFAGGGKFTHEEKETLKKANVLGKSLQIPFQSDSEIKQLYQNALV HHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHCCEE FVFPSMYEGFGIPLLESMSLGCPVACSNTSSFPEVVGDAAVTFDPWYPESIRDSVDRLFN EEEHHHHCCCCCCHHHHCCCCCCEEECCCCCCHHHHCCCEEEECCCCCHHHHHHHHHHHC SESLRLKMIARGKERSKQFSWEKTGEKHLKIYNQLLASSFESK CCCEEEEEECCCCHHHHCCCHHHCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MILFDFQTFLNQKYGGISRLFVEVMDYLSKHDSEFELPLVSSENVNLIGKDFYKPIFKIK CEEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEHHHHHHHHHHEE YALEVPEIETWLSGKSFSGKTFLYSLYKSFKKLQNKLVIRFLNRRNQKLITKKLLDQKFK EEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VFHPTYFDNYYLDQISKGPNKFVITIFDLIHERFPGYYKLDDIALRNRKSLCYAADRIIA HCCCCCCCCHHHHHHCCCCCEEEEHHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHCEEEE ISKSTKNDLMEFYGIPNDKIEVIHLASNLHLAFDLESNLIWKNYILFVGERGGYKNFNNF EECCCHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCCEEEEEEEEEEECCCCCCCHHHH VHGVSPIIQKYKVNLIFAGGGKFTHEEKETLKKANVLGKSLQIPFQSDSEIKQLYQNALV HHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHCCEE FVFPSMYEGFGIPLLESMSLGCPVACSNTSSFPEVVGDAAVTFDPWYPESIRDSVDRLFN EEEHHHHCCCCCCHHHHCCCCCCEEECCCCCCHHHHCCCEEEECCCCCHHHHHHHHHHHC SESLRLKMIARGKERSKQFSWEKTGEKHLKIYNQLLASSFESK CCCEEEEEECCCCHHHHCCCHHHCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]