| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is fadF [H]
Identifier: 183221188
GI number: 183221188
Start: 1879912
End: 1882014
Strand: Direct
Name: fadF [H]
Synonym: LEPBI_I1802
Alternate gene names: 183221188
Gene position: 1879912-1882014 (Clockwise)
Preceding gene: 183221186
Following gene: 183221189
Centisome position: 52.22
GC content: 43.13
Gene sequence:
>2103_bases ATGGATATCGGAAGAATTCTCTTTCACCTATTATTCACAGCTTTTTTCGTCGTGGCAAACGTAGTGTTTGTCCGCGCTAT CCTTTACAGGCTCGGATTGATCTTCAACGGTCGTCCTGCATTTTTTAACGAAGATGCAAAAAAGAACCTGAACATCGGAT TCCGTTTAAAAAGTTTTTTGATAAACGTAATCTTACAAAAAAAGAACTTCCGTGAACCTGTACGCGGGATCATGCACGCC TTTGTTTTTTATGGATTTATCGTCTATACGATCCATACAACAAGCCAAATGATCGCGGGTGTCTTCGGTTATGCCATGGA AGACCCTTATCAATTTGCACTACCCAATTTTTTATTTGGGGAAACTGCAAACCATCTCTATGAACAAACTGTTAACTATG TATCCATTTTAGTTTTAACTGGTCTCGGTTTTTTTGCTTGGAGACGTTGGATCCAAAAAGCAAAAGGTTTGGACGTTCAC TCACCTGCTTCTGCCATTGTGATCAGTATGATTGCAACGCTTATGGTGACCACCTTACTTGGGAATGGTGCTAAGACTGT TGCGGCAACTTACTACACACATGCAGGTTTCATCGATGGTGCCATCGGAAGTCTTTGGGAATCAATCGGAGTAGCAAACT CTTCTGCGGATATCGTTTTCCAAATCATGTGGTGGGGCCATATCATCACTGTTTTCTCTTTTATGTTGTATGTTCCTACA TCCAAACATGCTCACTTGATCTTTGCTCCATTTAACTACTTCCTTGCCACTGACACTCCCAAAGGACAGTTATCGAAACT CAATTTGGATGATGAAAATGCAGTTTGGGGATCCAACCGTGTGGAAGATTTCCCTTGGCCAAACCTACTCGATGGAATGT CTTGCATTGAATGCGGACGTTGCCAAGTGGAGTGCCCTGCCAACAGAACGGGTAAAGTATTAAATCCAAAAGCTATCATT GTCGAACTCAAACACCAAATGTTAGAGAAAATGCCTGAGGTTGCTTCCGCTCGTGCTGGCAAAACTCCAGAAGAAGCGGC AGAAGCAGTTGCGGCTCTTGACACAGGTGTCATCAACTCTCATGAAGGCCTTAGCGAAGAAGCACTTTGGGGATGTACCA CTTGTTATGCGTGCGTTGAAGCATGCCCTGTTGGAAACAACCAAGTAAACGCCATCATTGAGATGCGCCGTCACTTAGTC CTTGCTGAATCCAAAATGAGTCCAGAACTCCAAAAAGCCTTCACCAACATGGAAAACAATTCTAACCCATGGGGAGTTGG TGCACACACAAGAGCAGACTGGGCAGATGGCTTAAACGTAAAAGTACTCTCAGAAGCAGAAGACAAAAACGTAGATGTTC TCTATTGGGTAGGTTGTGCTGGTGCTTTTGATGAAAGAAATAAAAAGATCTCTCGTGACTTTGTCAAAATCATGCAAAAA GCAGATGTGAACTTTGGTATCCTTGGAACTGAAGAAGGATGTTCGGGAGACTCGGCTCGCCGTGGTGGTAACGAATACCT ATACCAAACATTAGCACAAACAAACGTAGACACAATCAACGGTTACGGAATCAAAAAGATCGTAACCGCTTGTCCACATT GTTACAACACGATCAAAAACGAATATCCACAATTTGGTGGGAACTTCGAAGTCATCCACCACTCGGAATACATCAACCAA CTATCCAAAGATGGAAAAATCGATGTAAAAGTGGCCGATGATGCCAAAACTGGAAAGTATACGTATCACGACTCTTGTTA CATCGGTCGTTATAACAACAATTACGACAACCCTCGTGATGTTGTGAAAAAGGTATCTGGTGGTAAAATAGAAGAAGCAG TCGACCATCACTCCAAAGGACTTTGTTGTGGTGCAGGTGGTGCGCAGTACTGGATGGAAGAACATGTAGATGAGTCCAAC CCAGAAAGTATGCGTGTGAATAGCAAACGTACAGGACAACTCCTCGATACAGGTGCCACAACCATTGCTACAGCCTGCCC ATTCTGTATCACAATGATCACAGACGGAGTCAAAGCTGCGGAAAAAATTGACTCTGTCAAAGTAAAAGACATTGCAGAAC TTGTAGCCGAAAATATCGACTAA
Upstream 100 bases:
>100_bases AATCTTCTGACATATCCCTGTAAAAACCGAATTTTCCTGGACATTCATTTTTCTATAGAAATCCTAGGAAATACCAAACA CCTTAAGGGCATAAATATAA
Downstream 100 bases:
>100_bases CAAGATCATAGGGGAAATATGAGATTCGCAGATTTCCCCTATCTAATTTCCACATTCAGTCCCAGGAAGGAAACCGTATG GAATTCTTTTTGGGACTTTT
Product: putative CoB--CoM heterodisulfide reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 700; Mature: 700
Protein sequence:
>700_residues MDIGRILFHLLFTAFFVVANVVFVRAILYRLGLIFNGRPAFFNEDAKKNLNIGFRLKSFLINVILQKKNFREPVRGIMHA FVFYGFIVYTIHTTSQMIAGVFGYAMEDPYQFALPNFLFGETANHLYEQTVNYVSILVLTGLGFFAWRRWIQKAKGLDVH SPASAIVISMIATLMVTTLLGNGAKTVAATYYTHAGFIDGAIGSLWESIGVANSSADIVFQIMWWGHIITVFSFMLYVPT SKHAHLIFAPFNYFLATDTPKGQLSKLNLDDENAVWGSNRVEDFPWPNLLDGMSCIECGRCQVECPANRTGKVLNPKAII VELKHQMLEKMPEVASARAGKTPEEAAEAVAALDTGVINSHEGLSEEALWGCTTCYACVEACPVGNNQVNAIIEMRRHLV LAESKMSPELQKAFTNMENNSNPWGVGAHTRADWADGLNVKVLSEAEDKNVDVLYWVGCAGAFDERNKKISRDFVKIMQK ADVNFGILGTEEGCSGDSARRGGNEYLYQTLAQTNVDTINGYGIKKIVTACPHCYNTIKNEYPQFGGNFEVIHHSEYINQ LSKDGKIDVKVADDAKTGKYTYHDSCYIGRYNNNYDNPRDVVKKVSGGKIEEAVDHHSKGLCCGAGGAQYWMEEHVDESN PESMRVNSKRTGQLLDTGATTIATACPFCITMITDGVKAAEKIDSVKVKDIAELVAENID
Sequences:
>Translated_700_residues MDIGRILFHLLFTAFFVVANVVFVRAILYRLGLIFNGRPAFFNEDAKKNLNIGFRLKSFLINVILQKKNFREPVRGIMHA FVFYGFIVYTIHTTSQMIAGVFGYAMEDPYQFALPNFLFGETANHLYEQTVNYVSILVLTGLGFFAWRRWIQKAKGLDVH SPASAIVISMIATLMVTTLLGNGAKTVAATYYTHAGFIDGAIGSLWESIGVANSSADIVFQIMWWGHIITVFSFMLYVPT SKHAHLIFAPFNYFLATDTPKGQLSKLNLDDENAVWGSNRVEDFPWPNLLDGMSCIECGRCQVECPANRTGKVLNPKAII VELKHQMLEKMPEVASARAGKTPEEAAEAVAALDTGVINSHEGLSEEALWGCTTCYACVEACPVGNNQVNAIIEMRRHLV LAESKMSPELQKAFTNMENNSNPWGVGAHTRADWADGLNVKVLSEAEDKNVDVLYWVGCAGAFDERNKKISRDFVKIMQK ADVNFGILGTEEGCSGDSARRGGNEYLYQTLAQTNVDTINGYGIKKIVTACPHCYNTIKNEYPQFGGNFEVIHHSEYINQ LSKDGKIDVKVADDAKTGKYTYHDSCYIGRYNNNYDNPRDVVKKVSGGKIEEAVDHHSKGLCCGAGGAQYWMEEHVDESN PESMRVNSKRTGQLLDTGATTIATACPFCITMITDGVKAAEKIDSVKVKDIAELVAENID >Mature_700_residues MDIGRILFHLLFTAFFVVANVVFVRAILYRLGLIFNGRPAFFNEDAKKNLNIGFRLKSFLINVILQKKNFREPVRGIMHA FVFYGFIVYTIHTTSQMIAGVFGYAMEDPYQFALPNFLFGETANHLYEQTVNYVSILVLTGLGFFAWRRWIQKAKGLDVH SPASAIVISMIATLMVTTLLGNGAKTVAATYYTHAGFIDGAIGSLWESIGVANSSADIVFQIMWWGHIITVFSFMLYVPT SKHAHLIFAPFNYFLATDTPKGQLSKLNLDDENAVWGSNRVEDFPWPNLLDGMSCIECGRCQVECPANRTGKVLNPKAII VELKHQMLEKMPEVASARAGKTPEEAAEAVAALDTGVINSHEGLSEEALWGCTTCYACVEACPVGNNQVNAIIEMRRHLV LAESKMSPELQKAFTNMENNSNPWGVGAHTRADWADGLNVKVLSEAEDKNVDVLYWVGCAGAFDERNKKISRDFVKIMQK ADVNFGILGTEEGCSGDSARRGGNEYLYQTLAQTNVDTINGYGIKKIVTACPHCYNTIKNEYPQFGGNFEVIHHSEYINQ LSKDGKIDVKVADDAKTGKYTYHDSCYIGRYNNNYDNPRDVVKKVSGGKIEEAVDHHSKGLCCGAGGAQYWMEEHVDESN PESMRVNSKRTGQLLDTGATTIATACPFCITMITDGVKAAEKIDSVKVKDIAELVAENID
Specific function: Unknown
COG id: COG0247
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR004017 - InterPro: IPR012285 - InterPro: IPR009051 [H]
Pfam domain/function: PF02754 CCG [H]
EC number: NA
Molecular weight: Translated: 77549; Mature: 77549
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIGRILFHLLFTAFFVVANVVFVRAILYRLGLIFNGRPAFFNEDAKKNLNIGFRLKSFL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHH INVILQKKNFREPVRGIMHAFVFYGFIVYTIHTTSQMIAGVFGYAMEDPYQFALPNFLFG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHH ETANHLYEQTVNYVSILVLTGLGFFAWRRWIQKAKGLDVHSPASAIVISMIATLMVTTLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH GNGAKTVAATYYTHAGFIDGAIGSLWESIGVANSSADIVFQIMWWGHIITVFSFMLYVPT CCCCHHHEEHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCC SKHAHLIFAPFNYFLATDTPKGQLSKLNLDDENAVWGSNRVEDFPWPNLLDGMSCIECGR CCCCEEEEEECEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHCCC CQVECPANRTGKVLNPKAIIVELKHQMLEKMPEVASARAGKTPEEAAEAVAALDTGVINS EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC HEGLSEEALWGCTTCYACVEACPVGNNQVNAIIEMRRHLVLAESKMSPELQKAFTNMENN CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC SNPWGVGAHTRADWADGLNVKVLSEAEDKNVDVLYWVGCAGAFDERNKKISRDFVKIMQK CCCCCCCCCCCCHHCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH ADVNFGILGTEEGCSGDSARRGGNEYLYQTLAQTNVDTINGYGIKKIVTACPHCYNTIKN CCCCEEEEECCCCCCCCCHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHHHHHHH EYPQFGGNFEVIHHSEYINQLSKDGKIDVKVADDAKTGKYTYHDSCYIGRYNNNYDNPRD CCCCCCCCEEEEECHHHHHHHCCCCCEEEEECCCCCCCCEEECCCEEEECCCCCCCCHHH VVKKVSGGKIEEAVDHHSKGLCCGAGGAQYWMEEHVDESNPESMRVNSKRTGQLLDTGAT HHHHCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHCCCCCCCCEEECCCCCCCHHHCCHH TIATACPFCITMITDGVKAAEKIDSVKVKDIAELVAENID HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure MDIGRILFHLLFTAFFVVANVVFVRAILYRLGLIFNGRPAFFNEDAKKNLNIGFRLKSFL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHH INVILQKKNFREPVRGIMHAFVFYGFIVYTIHTTSQMIAGVFGYAMEDPYQFALPNFLFG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHH ETANHLYEQTVNYVSILVLTGLGFFAWRRWIQKAKGLDVHSPASAIVISMIATLMVTTLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH GNGAKTVAATYYTHAGFIDGAIGSLWESIGVANSSADIVFQIMWWGHIITVFSFMLYVPT CCCCHHHEEHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCC SKHAHLIFAPFNYFLATDTPKGQLSKLNLDDENAVWGSNRVEDFPWPNLLDGMSCIECGR CCCCEEEEEECEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHCCC CQVECPANRTGKVLNPKAIIVELKHQMLEKMPEVASARAGKTPEEAAEAVAALDTGVINS EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC HEGLSEEALWGCTTCYACVEACPVGNNQVNAIIEMRRHLVLAESKMSPELQKAFTNMENN CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC SNPWGVGAHTRADWADGLNVKVLSEAEDKNVDVLYWVGCAGAFDERNKKISRDFVKIMQK CCCCCCCCCCCCHHCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH ADVNFGILGTEEGCSGDSARRGGNEYLYQTLAQTNVDTINGYGIKKIVTACPHCYNTIKN CCCCEEEEECCCCCCCCCHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHHHHHHH EYPQFGGNFEVIHHSEYINQLSKDGKIDVKVADDAKTGKYTYHDSCYIGRYNNNYDNPRD CCCCCCCCEEEEECHHHHHHHCCCCCEEEEECCCCCCCCEEECCCEEEECCCCCCCCHHH VVKKVSGGKIEEAVDHHSKGLCCGAGGAQYWMEEHVDESNPESMRVNSKRTGQLLDTGAT HHHHCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHCCCCCCCCEEECCCCCCCHHHCCHH TIATACPFCITMITDGVKAAEKIDSVKVKDIAELVAENID HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]