| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221189
Identifier: 183221189
GI number: 183221189
Start: 1882033
End: 1882953
Strand: Direct
Name: 183221189
Synonym: LEPBI_I1803
Alternate gene names: NA
Gene position: 1882033-1882953 (Clockwise)
Preceding gene: 183221188
Following gene: 183221190
Centisome position: 52.28
GC content: 39.74
Gene sequence:
>921_bases ATGAGATTCGCAGATTTCCCCTATCTAATTTCCACATTCAGTCCCAGGAAGGAAACCGTATGGAATTCTTTTTGGGACTT TTGTTGTACGCATACGAAAGCGTTTGGCCAAAAACTGCCAAAACTCCAAAGATTGTTTCTCGTAAACTTACTTTTGTTTG TTTTCGTTTTTGGAATTCCAGCCGAATCTAAAAAACAAACCTTCCAGCCTAACCCAGATGATGGGATCACCATTATTGTG GAAAAAGGACAAACCTTAAGCATTATTTCCAAAACCTATTTGGATGATCCGAGGAAATGGAAGGAACTTCTGAAATCCAA CCAAATCGACAATCCCAATCTCATCATCCCAGGCATGAAACTATGGATCCCAAAAAGTTTAGGGAAAAAACCTCTCGCCG ACTTACAACGGTTCACCGGCACAACTGAAGTTTTAAAAATTTCTCAAAAACAAAATGATTGGGCCAAAGGAAATATTGGC GAAGGACTGTATGCGAAGGATGAGGTACGAACCTTAAAAGAATCGGAAGCACAATTTGTTTTTCAATCGGGGTCTCGATT TGAAATCACAGAAAATAGCCATGTAATTATGGAACGCGGAAAAACTGATTCGGAACCAGATGAAGTATTTTTACGACAAG GACGCATTCGCTCCCTCATTCCTAAATCAAAATCACCTAACCAAAAAATGTTTTTATTAAAAACAGAATCGGCTGAGTCT GTTGTCAAAGGAACTGATTTTATAACGGAAGTGGATACTGCGGGAAATACAACTTTAAGTTGTTATGAAGGAAGTGTTGC GGTATCGGCAGAAAAAGTAACCGTACTCGTCAACCAAGGCTTTGCCACCTATGTTGAAAAAGGAAAGGCACCTTTAAAAC CATTCCCTGTTCCAAACCCTCCCATCCCAAACAACCAATGA
Upstream 100 bases:
>100_bases AGACGGAGTCAAAGCTGCGGAAAAAATTGACTCTGTCAAAGTAAAAGACATTGCAGAACTTGTAGCCGAAAATATCGACT AACAAGATCATAGGGGAAAT
Downstream 100 bases:
>100_bases CGTTACAAAACATTCCAATTCAGTTTGTTTTTTTCTCTATTTTTCTTTTTTGGTTTTGGAATCCTCTTTTCGCCAAACAA ATCCAATTTGCACTGGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MRFADFPYLISTFSPRKETVWNSFWDFCCTHTKAFGQKLPKLQRLFLVNLLLFVFVFGIPAESKKQTFQPNPDDGITIIV EKGQTLSIISKTYLDDPRKWKELLKSNQIDNPNLIIPGMKLWIPKSLGKKPLADLQRFTGTTEVLKISQKQNDWAKGNIG EGLYAKDEVRTLKESEAQFVFQSGSRFEITENSHVIMERGKTDSEPDEVFLRQGRIRSLIPKSKSPNQKMFLLKTESAES VVKGTDFITEVDTAGNTTLSCYEGSVAVSAEKVTVLVNQGFATYVEKGKAPLKPFPVPNPPIPNNQ
Sequences:
>Translated_306_residues MRFADFPYLISTFSPRKETVWNSFWDFCCTHTKAFGQKLPKLQRLFLVNLLLFVFVFGIPAESKKQTFQPNPDDGITIIV EKGQTLSIISKTYLDDPRKWKELLKSNQIDNPNLIIPGMKLWIPKSLGKKPLADLQRFTGTTEVLKISQKQNDWAKGNIG EGLYAKDEVRTLKESEAQFVFQSGSRFEITENSHVIMERGKTDSEPDEVFLRQGRIRSLIPKSKSPNQKMFLLKTESAES VVKGTDFITEVDTAGNTTLSCYEGSVAVSAEKVTVLVNQGFATYVEKGKAPLKPFPVPNPPIPNNQ >Mature_306_residues MRFADFPYLISTFSPRKETVWNSFWDFCCTHTKAFGQKLPKLQRLFLVNLLLFVFVFGIPAESKKQTFQPNPDDGITIIV EKGQTLSIISKTYLDDPRKWKELLKSNQIDNPNLIIPGMKLWIPKSLGKKPLADLQRFTGTTEVLKISQKQNDWAKGNIG EGLYAKDEVRTLKESEAQFVFQSGSRFEITENSHVIMERGKTDSEPDEVFLRQGRIRSLIPKSKSPNQKMFLLKTESAES VVKGTDFITEVDTAGNTTLSCYEGSVAVSAEKVTVLVNQGFATYVEKGKAPLKPFPVPNPPIPNNQ
Specific function: Unknown
COG id: COG4254
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34526; Mature: 34526
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFADFPYLISTFSPRKETVWNSFWDFCCTHTKAFGQKLPKLQRLFLVNLLLFVFVFGIP CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AESKKQTFQPNPDDGITIIVEKGQTLSIISKTYLDDPRKWKELLKSNQIDNPNLIIPGMK CCCCCCCCCCCCCCCEEEEEECCCEEEHHHHHHCCCHHHHHHHHHHCCCCCCCEEECCHH LWIPKSLGKKPLADLQRFTGTTEVLKISQKQNDWAKGNIGEGLYAKDEVRTLKESEAQFV EECCHHCCCCHHHHHHHHCCCHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEE FQSGSRFEITENSHVIMERGKTDSEPDEVFLRQGRIRSLIPKSKSPNQKMFLLKTESAES ECCCCEEEEECCCEEEEECCCCCCCHHHHHHHCCHHHHHCCCCCCCCCEEEEEECCCHHH VVKGTDFITEVDTAGNTTLSCYEGSVAVSAEKVTVLVNQGFATYVEKGKAPLKPFPVPNP HHHCCHHHEEECCCCCCEEEEECCCEEEEEEEEEEEEECCHHHHHHCCCCCCCCCCCCCC PIPNNQ CCCCCC >Mature Secondary Structure MRFADFPYLISTFSPRKETVWNSFWDFCCTHTKAFGQKLPKLQRLFLVNLLLFVFVFGIP CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AESKKQTFQPNPDDGITIIVEKGQTLSIISKTYLDDPRKWKELLKSNQIDNPNLIIPGMK CCCCCCCCCCCCCCCEEEEEECCCEEEHHHHHHCCCHHHHHHHHHHCCCCCCCEEECCHH LWIPKSLGKKPLADLQRFTGTTEVLKISQKQNDWAKGNIGEGLYAKDEVRTLKESEAQFV EECCHHCCCCHHHHHHHHCCCHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEE FQSGSRFEITENSHVIMERGKTDSEPDEVFLRQGRIRSLIPKSKSPNQKMFLLKTESAES ECCCCEEEEECCCEEEEECCCCCCCHHHHHHHCCHHHHHCCCCCCCCCEEEEEECCCHHH VVKGTDFITEVDTAGNTTLSCYEGSVAVSAEKVTVLVNQGFATYVEKGKAPLKPFPVPNP HHHCCHHHEEECCCCCCEEEEECCCEEEEEEEEEEEEECCHHHHHHCCCCCCCCCCCCCC PIPNNQ CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA