| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220909
Identifier: 183220909
GI number: 183220909
Start: 1586543
End: 1587649
Strand: Reverse
Name: 183220909
Synonym: LEPBI_I1522
Alternate gene names: NA
Gene position: 1587649-1586543 (Counterclockwise)
Preceding gene: 183220924
Following gene: 183220908
Centisome position: 44.11
GC content: 43.09
Gene sequence:
>1107_bases ATGAGAACCCTGTACTTCAGCCTCCTTCTCTTTGTTTCCATTTCTTGCCTCCGTTTCCGAGTGGAAAACCTCAAAGAAGA AATCCTCTTTCGCATCCCCCTTGGGGCCACCAATGAAACCTTTGAAGGAGTGGTGGTGAACCAGGTCTTGACCAATGTTC CCTTAACCATCCCTACTTCCTCCAATATCTCAGCACTTCCTGACAATAAACAAGCAGTCATCAAATTGTTTGACCGGAAT GGAAGATTAGATGCAACGATTGGAAACCCAGACTTCAAATCAGTTGCAGGCATCCCCCACTACCCATTCCGCTTTGGTGG GATTGGGATTGTGGCAATGAATGAAGATGGAGATCTTGTGGTCCAAAACCGAATTTCTTCCAAAGGGATGGAACTCCCTG CCGGGCAAGAGAACTTATACAAAACCTATAGTGGCGCCTTTTCGACCCAAGGGACAACCGTATTACCTTCCTTTCTTGTG CAAATCACACAAAAAGGGGTCGTGAAATTTATGTTAGGAGCTTCTGGAAAAAACTCCGAACCATTCCGTTACATTGAGTA CATCTTACCTGGTGAGGGTGACAAATTATTTGTTTATCACCGCATTGCAGAAGAAATGCGACTCTCTTATTTTGAGGAAG GGGAACTCAAAGGGAATCTAAAAGAATCCGCCCTTGATGTCTTTTCTAGTTCTGACGCCAAAGAGTATGACATCACCTTA GACAAACTCCTCCCCCATCCAGAAGGGGATTATGTTCTGGGATCGTTTAGTTATGATTCCAAAAAAGACAAACGGTTTAA GTTCCGAAGGATTTATCGTTTCCATTTTGATTCCAAAGAAGTAGAATTATTAAAAGAAATCCAAGACCCTTCGGAGATTT TATTTTCCATTCGCAACAATGGAGAATTTTATATTTGGGAAACAGAAGATGGAGGGAATTCAGTCCGTCTGCAAGTCCAT GACAAAGAAGGAAACCACATCAATAACAAAAGGATTCCCTTTTCCAGCCCACGTGGGCAGTGGAGGGAAACGTATACGGA TGCCTTTGATACCATTTATTCTGTGAGAATTCGCTCTGGTGCACTTGAAGTGTATCGTTGGATTTAG
Upstream 100 bases:
>100_bases TAAGAGACCAAAGCTCATGCTAAAATTTAGCACGTCTCCTGACAGGCTAGGAAAAGCGAGTTGTCCTGTAAATAAAAAAT TAGGGAATGGATGTTGCACC
Downstream 100 bases:
>100_bases ATGAAACTCATCCCCCTTTTTACGAATCAAGAATCCAAATCCATGGATTCTTTGGCCCATACAGAACTTGGATTTAGTGA ACAAAGTTTAATGGGAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MRTLYFSLLLFVSISCLRFRVENLKEEILFRIPLGATNETFEGVVVNQVLTNVPLTIPTSSNISALPDNKQAVIKLFDRN GRLDATIGNPDFKSVAGIPHYPFRFGGIGIVAMNEDGDLVVQNRISSKGMELPAGQENLYKTYSGAFSTQGTTVLPSFLV QITQKGVVKFMLGASGKNSEPFRYIEYILPGEGDKLFVYHRIAEEMRLSYFEEGELKGNLKESALDVFSSSDAKEYDITL DKLLPHPEGDYVLGSFSYDSKKDKRFKFRRIYRFHFDSKEVELLKEIQDPSEILFSIRNNGEFYIWETEDGGNSVRLQVH DKEGNHINNKRIPFSSPRGQWRETYTDAFDTIYSVRIRSGALEVYRWI
Sequences:
>Translated_368_residues MRTLYFSLLLFVSISCLRFRVENLKEEILFRIPLGATNETFEGVVVNQVLTNVPLTIPTSSNISALPDNKQAVIKLFDRN GRLDATIGNPDFKSVAGIPHYPFRFGGIGIVAMNEDGDLVVQNRISSKGMELPAGQENLYKTYSGAFSTQGTTVLPSFLV QITQKGVVKFMLGASGKNSEPFRYIEYILPGEGDKLFVYHRIAEEMRLSYFEEGELKGNLKESALDVFSSSDAKEYDITL DKLLPHPEGDYVLGSFSYDSKKDKRFKFRRIYRFHFDSKEVELLKEIQDPSEILFSIRNNGEFYIWETEDGGNSVRLQVH DKEGNHINNKRIPFSSPRGQWRETYTDAFDTIYSVRIRSGALEVYRWI >Mature_368_residues MRTLYFSLLLFVSISCLRFRVENLKEEILFRIPLGATNETFEGVVVNQVLTNVPLTIPTSSNISALPDNKQAVIKLFDRN GRLDATIGNPDFKSVAGIPHYPFRFGGIGIVAMNEDGDLVVQNRISSKGMELPAGQENLYKTYSGAFSTQGTTVLPSFLV QITQKGVVKFMLGASGKNSEPFRYIEYILPGEGDKLFVYHRIAEEMRLSYFEEGELKGNLKESALDVFSSSDAKEYDITL DKLLPHPEGDYVLGSFSYDSKKDKRFKFRRIYRFHFDSKEVELLKEIQDPSEILFSIRNNGEFYIWETEDGGNSVRLQVH DKEGNHINNKRIPFSSPRGQWRETYTDAFDTIYSVRIRSGALEVYRWI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42003; Mature: 42003
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLYFSLLLFVSISCLRFRVENLKEEILFRIPLGATNETFEGVVVNQVLTNVPLTIPTS CHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEHHHHHHCCCEEECCC SNISALPDNKQAVIKLFDRNGRLDATIGNPDFKSVAGIPHYPFRFGGIGIVAMNEDGDLV CCCCCCCCCCEEEEEEECCCCEEEEEECCCCHHHHCCCCCCCEEECCEEEEEECCCCCEE VQNRISSKGMELPAGQENLYKTYSGAFSTQGTTVLPSFLVQITQKGVVKFMLGASGKNSE EEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCC PFRYIEYILPGEGDKLFVYHRIAEEMRLSYFEEGELKGNLKESALDVFSSSDAKEYDITL CCEEEEEEECCCCCEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEH DKLLPHPEGDYVLGSFSYDSKKDKRFKFRRIYRFHFDSKEVELLKEIQDPSEILFSIRNN HHHCCCCCCCEEEEECCCCCCCCHHHHEEEEEEEECCCHHHHHHHHHCCHHHHHEEEECC GEFYIWETEDGGNSVRLQVHDKEGNHINNKRIPFSSPRGQWRETYTDAFDTIYSVRIRSG CEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECC ALEVYRWI CEEHEECC >Mature Secondary Structure MRTLYFSLLLFVSISCLRFRVENLKEEILFRIPLGATNETFEGVVVNQVLTNVPLTIPTS CHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEHHHHHHCCCEEECCC SNISALPDNKQAVIKLFDRNGRLDATIGNPDFKSVAGIPHYPFRFGGIGIVAMNEDGDLV CCCCCCCCCCEEEEEEECCCCEEEEEECCCCHHHHCCCCCCCEEECCEEEEEECCCCCEE VQNRISSKGMELPAGQENLYKTYSGAFSTQGTTVLPSFLVQITQKGVVKFMLGASGKNSE EEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCC PFRYIEYILPGEGDKLFVYHRIAEEMRLSYFEEGELKGNLKESALDVFSSSDAKEYDITL CCEEEEEEECCCCCEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEH DKLLPHPEGDYVLGSFSYDSKKDKRFKFRRIYRFHFDSKEVELLKEIQDPSEILFSIRNN HHHCCCCCCCEEEEECCCCCCCCHHHHEEEEEEEECCCHHHHHHHHHCCHHHHHEEEECC GEFYIWETEDGGNSVRLQVHDKEGNHINNKRIPFSSPRGQWRETYTDAFDTIYSVRIRSG CEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECC ALEVYRWI CEEHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA