Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

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The map label for this gene is yjeF [C]

Identifier: 183220908

GI number: 183220908

Start: 1585034

End: 1586542

Strand: Reverse

Name: yjeF [C]

Synonym: LEPBI_I1521

Alternate gene names: 183220908

Gene position: 1586542-1585034 (Counterclockwise)

Preceding gene: 183220909

Following gene: 183220907

Centisome position: 44.07

GC content: 41.09

Gene sequence:

>1509_bases
ATGAAACTCATCCCCCTTTTTACGAATCAAGAATCCAAATCCATGGATTCTTTGGCCCATACAGAACTTGGATTTAGTGA
ACAAAGTTTAATGGGAATGGCCGCCTTATCTGTGTTTCACGCCAATGAAGATTTATGGAAAACGGCAGAATCCATTTGGA
TTGTTTGTGGGAGTGGCGGAAACGGTGGTGATGGGTATGCTCTCGCTCATATACTTTTCCAAGAAGGATACCCAGTCCGA
GTATTTCAAACTTCGCCAAACAAAAATGATGCTGGAAAATTTTACGAATCTCTTGTTCAGTCATCAATTGGAAAAACAGA
AACGATTGGCAACTTAAACGATTTCCAAACCGCCACAGAATCAGAAGATGTGGATTCTGTTTTACTTGTCGATGCCATCC
TTGGCACAGGATTCCAAAACAAAGTCTCAAAAGAAATAACCGAAGCCATTTTTACCATCAATGAATCCGAAGTCTTTTTT
TATCGGCTTTCTCTGGATACGCCAAGTGGCTGGAATCCTTATGGACTGGGAAGTTCCGATACGGAAAACCAACCATTTGT
TTTTGCTGATTCCATTGAAGAGTTAGGTACAAGGAAGTGGGAGAATGTGGGATACATTTATGAAAAAGACAATCTCATAC
CCAGATACTACGAATCCATTGGATTTCCCATTCGCACTCACCTTACAAATGCTAATTTTTCAAATCGGTATTATTTAGAA
AAAGATCCGGAAAGGGCGATTCAAGTTCTCAAACGAAAGAACAAAGACCATAAATACAGTGCAGGATCTGCTTTGTTTTA
TGGTGGGAAAGAAGGAATGGAAGGAGCAATTTTACTATCAGAAACTGCCTTCTCTCGGTTAGGTGGAGGTATTAGTAAAA
TTTTCTCCCCTTCTGCAAAAATTAGCCAATATGTATTAAAAGAAGATTTATCCAAGATGGCCATGGTTTCGGATTTCCAA
ACCATGGAAGAAGATCCGTTTTTTTCCAAAATCAAAACCTTGGTTGTTGGGCCAGGCCTTTCCGAATTTCCGAAGGGATT
GGATGGATGGAAACTTAGAGAGGGATTGGCTTGTATCTTAGATGCAGGAGCCATTCCGAACCCAGGTACAAAACTTCCCA
TCGGTGATAAAATCCTCCTCACACCCCATGTCGGTGAATTGAACCGTATGACAGGAAAAACCCATCACTCTGTCCAAGAA
GCATATGACACACTCTTACCCTTCACGAAAGAAAACCAAGTGTATGTACTCCTCAAATCTTTTGTGAGTTTACTTGTTTG
TCCCGATGGATCTTCTTATGTTTGGGAGTCTCCCAATCCAAAACTTGCTACGATGGGAACGGGTGATTTACTTTCTGGAA
TCCTCGCGCGCTATTTGAGTTTGGATTTGGACCTTTCTATTCCAGAAGCGGTGCAACTTTCTCTTTCCTTTCTCGACCAT
TCGAAAGACCTAGAAGAACCCTATCCGTCTGCTCACCAAATCTTAAAATCCTTAGTGGAGTTACTCTAA

Upstream 100 bases:

>100_bases
CCCACGTGGGCAGTGGAGGGAAACGTATACGGATGCCTTTGATACCATTTATTCTGTGAGAATTCGCTCTGGTGCACTTG
AAGTGTATCGTTGGATTTAG

Downstream 100 bases:

>100_bases
TGGGAAAAGGTTACCATTCACGATCCCCCGAAGAATTCCGGGACTATTTAAAACAAATTGGTGACAAACATAAAAGGACA
AGGTGGCGCCAAATTGTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Sugar Kinase; Carbohydrate Kinase; YjeF Family Protein; Carbohydrate Kinase Family Protein; Carbohydrate Kinase Yjef Related Protein; YjeF-Related Sugar Kinase; YjeF-Related Protein; YjeF Protein; Kinase; Carbohydrate Kinase YjeF-Related Protein; YjeF-Like Protein; Yjef Family Protein; Carbohydrate Kinase YjeF-Like Protein; Sugar Kinase N-Terminal Region; Carbohydrate Kinase Family; YjeF-Like Protein/Carbohydrate Kinase; Carbohydrate Kinase Yjef Like Protein; Sugar Kinase Domain-Containing Protein; Ribosomal Protein S; 30S Ribosomal Protein S; YjeF-Like Protein C-Terminus; Yjef-Like Protein; Short Chain Dehydrogenase Fused Sugar Kinase

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MKLIPLFTNQESKSMDSLAHTELGFSEQSLMGMAALSVFHANEDLWKTAESIWIVCGSGGNGGDGYALAHILFQEGYPVR
VFQTSPNKNDAGKFYESLVQSSIGKTETIGNLNDFQTATESEDVDSVLLVDAILGTGFQNKVSKEITEAIFTINESEVFF
YRLSLDTPSGWNPYGLGSSDTENQPFVFADSIEELGTRKWENVGYIYEKDNLIPRYYESIGFPIRTHLTNANFSNRYYLE
KDPERAIQVLKRKNKDHKYSAGSALFYGGKEGMEGAILLSETAFSRLGGGISKIFSPSAKISQYVLKEDLSKMAMVSDFQ
TMEEDPFFSKIKTLVVGPGLSEFPKGLDGWKLREGLACILDAGAIPNPGTKLPIGDKILLTPHVGELNRMTGKTHHSVQE
AYDTLLPFTKENQVYVLLKSFVSLLVCPDGSSYVWESPNPKLATMGTGDLLSGILARYLSLDLDLSIPEAVQLSLSFLDH
SKDLEEPYPSAHQILKSLVELL

Sequences:

>Translated_502_residues
MKLIPLFTNQESKSMDSLAHTELGFSEQSLMGMAALSVFHANEDLWKTAESIWIVCGSGGNGGDGYALAHILFQEGYPVR
VFQTSPNKNDAGKFYESLVQSSIGKTETIGNLNDFQTATESEDVDSVLLVDAILGTGFQNKVSKEITEAIFTINESEVFF
YRLSLDTPSGWNPYGLGSSDTENQPFVFADSIEELGTRKWENVGYIYEKDNLIPRYYESIGFPIRTHLTNANFSNRYYLE
KDPERAIQVLKRKNKDHKYSAGSALFYGGKEGMEGAILLSETAFSRLGGGISKIFSPSAKISQYVLKEDLSKMAMVSDFQ
TMEEDPFFSKIKTLVVGPGLSEFPKGLDGWKLREGLACILDAGAIPNPGTKLPIGDKILLTPHVGELNRMTGKTHHSVQE
AYDTLLPFTKENQVYVLLKSFVSLLVCPDGSSYVWESPNPKLATMGTGDLLSGILARYLSLDLDLSIPEAVQLSLSFLDH
SKDLEEPYPSAHQILKSLVELL
>Mature_502_residues
MKLIPLFTNQESKSMDSLAHTELGFSEQSLMGMAALSVFHANEDLWKTAESIWIVCGSGGNGGDGYALAHILFQEGYPVR
VFQTSPNKNDAGKFYESLVQSSIGKTETIGNLNDFQTATESEDVDSVLLVDAILGTGFQNKVSKEITEAIFTINESEVFF
YRLSLDTPSGWNPYGLGSSDTENQPFVFADSIEELGTRKWENVGYIYEKDNLIPRYYESIGFPIRTHLTNANFSNRYYLE
KDPERAIQVLKRKNKDHKYSAGSALFYGGKEGMEGAILLSETAFSRLGGGISKIFSPSAKISQYVLKEDLSKMAMVSDFQ
TMEEDPFFSKIKTLVVGPGLSEFPKGLDGWKLREGLACILDAGAIPNPGTKLPIGDKILLTPHVGELNRMTGKTHHSVQE
AYDTLLPFTKENQVYVLLKSFVSLLVCPDGSSYVWESPNPKLATMGTGDLLSGILARYLSLDLDLSIPEAVQLSLSFLDH
SKDLEEPYPSAHQILKSLVELL

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55465; Mature: 55465

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIPLFTNQESKSMDSLAHTELGFSEQSLMGMAALSVFHANEDLWKTAESIWIVCGSGG
CEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHCCCEEEEEECCCC
NGGDGYALAHILFQEGYPVRVFQTSPNKNDAGKFYESLVQSSIGKTETIGNLNDFQTATE
CCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCC
SEDVDSVLLVDAILGTGFQNKVSKEITEAIFTINESEVFFYRLSLDTPSGWNPYGLGSSD
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCC
TENQPFVFADSIEELGTRKWENVGYIYEKDNLIPRYYESIGFPIRTHLTNANFSNRYYLE
CCCCCEEEECCHHHHCCCCCCCCCEEEECCCCCHHHHHHCCCCCEEEEECCCCCCCEEEC
KDPERAIQVLKRKNKDHKYSAGSALFYGGKEGMEGAILLSETAFSRLGGGISKIFSPSAK
CCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEHHHHHHHHCCCHHHHHCCHHH
ISQYVLKEDLSKMAMVSDFQTMEEDPFFSKIKTLVVGPGLSEFPKGLDGWKLREGLACIL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCHHHHCCCCCCHHHHHCCEEEE
DAGAIPNPGTKLPIGDKILLTPHVGELNRMTGKTHHSVQEAYDTLLPFTKENQVYVLLKS
ECCCCCCCCCCCCCCCEEEECCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEHHH
FVSLLVCPDGSSYVWESPNPKLATMGTGDLLSGILARYLSLDLDLSIPEAVQLSLSFLDH
HHHEEECCCCCCCEECCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
SKDLEEPYPSAHQILKSLVELL
CCCCCCCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MKLIPLFTNQESKSMDSLAHTELGFSEQSLMGMAALSVFHANEDLWKTAESIWIVCGSGG
CEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHCCCEEEEEECCCC
NGGDGYALAHILFQEGYPVRVFQTSPNKNDAGKFYESLVQSSIGKTETIGNLNDFQTATE
CCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCC
SEDVDSVLLVDAILGTGFQNKVSKEITEAIFTINESEVFFYRLSLDTPSGWNPYGLGSSD
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCC
TENQPFVFADSIEELGTRKWENVGYIYEKDNLIPRYYESIGFPIRTHLTNANFSNRYYLE
CCCCCEEEECCHHHHCCCCCCCCCEEEECCCCCHHHHHHCCCCCEEEEECCCCCCCEEEC
KDPERAIQVLKRKNKDHKYSAGSALFYGGKEGMEGAILLSETAFSRLGGGISKIFSPSAK
CCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEHHHHHHHHCCCHHHHHCCHHH
ISQYVLKEDLSKMAMVSDFQTMEEDPFFSKIKTLVVGPGLSEFPKGLDGWKLREGLACIL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCHHHHCCCCCCHHHHHCCEEEE
DAGAIPNPGTKLPIGDKILLTPHVGELNRMTGKTHHSVQEAYDTLLPFTKENQVYVLLKS
ECCCCCCCCCCCCCCCEEEECCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEHHH
FVSLLVCPDGSSYVWESPNPKLATMGTGDLLSGILARYLSLDLDLSIPEAVQLSLSFLDH
HHHEEECCCCCCCEECCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
SKDLEEPYPSAHQILKSLVELL
CCCCCCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA