| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is yjeF [C]
Identifier: 183220908
GI number: 183220908
Start: 1585034
End: 1586542
Strand: Reverse
Name: yjeF [C]
Synonym: LEPBI_I1521
Alternate gene names: 183220908
Gene position: 1586542-1585034 (Counterclockwise)
Preceding gene: 183220909
Following gene: 183220907
Centisome position: 44.07
GC content: 41.09
Gene sequence:
>1509_bases ATGAAACTCATCCCCCTTTTTACGAATCAAGAATCCAAATCCATGGATTCTTTGGCCCATACAGAACTTGGATTTAGTGA ACAAAGTTTAATGGGAATGGCCGCCTTATCTGTGTTTCACGCCAATGAAGATTTATGGAAAACGGCAGAATCCATTTGGA TTGTTTGTGGGAGTGGCGGAAACGGTGGTGATGGGTATGCTCTCGCTCATATACTTTTCCAAGAAGGATACCCAGTCCGA GTATTTCAAACTTCGCCAAACAAAAATGATGCTGGAAAATTTTACGAATCTCTTGTTCAGTCATCAATTGGAAAAACAGA AACGATTGGCAACTTAAACGATTTCCAAACCGCCACAGAATCAGAAGATGTGGATTCTGTTTTACTTGTCGATGCCATCC TTGGCACAGGATTCCAAAACAAAGTCTCAAAAGAAATAACCGAAGCCATTTTTACCATCAATGAATCCGAAGTCTTTTTT TATCGGCTTTCTCTGGATACGCCAAGTGGCTGGAATCCTTATGGACTGGGAAGTTCCGATACGGAAAACCAACCATTTGT TTTTGCTGATTCCATTGAAGAGTTAGGTACAAGGAAGTGGGAGAATGTGGGATACATTTATGAAAAAGACAATCTCATAC CCAGATACTACGAATCCATTGGATTTCCCATTCGCACTCACCTTACAAATGCTAATTTTTCAAATCGGTATTATTTAGAA AAAGATCCGGAAAGGGCGATTCAAGTTCTCAAACGAAAGAACAAAGACCATAAATACAGTGCAGGATCTGCTTTGTTTTA TGGTGGGAAAGAAGGAATGGAAGGAGCAATTTTACTATCAGAAACTGCCTTCTCTCGGTTAGGTGGAGGTATTAGTAAAA TTTTCTCCCCTTCTGCAAAAATTAGCCAATATGTATTAAAAGAAGATTTATCCAAGATGGCCATGGTTTCGGATTTCCAA ACCATGGAAGAAGATCCGTTTTTTTCCAAAATCAAAACCTTGGTTGTTGGGCCAGGCCTTTCCGAATTTCCGAAGGGATT GGATGGATGGAAACTTAGAGAGGGATTGGCTTGTATCTTAGATGCAGGAGCCATTCCGAACCCAGGTACAAAACTTCCCA TCGGTGATAAAATCCTCCTCACACCCCATGTCGGTGAATTGAACCGTATGACAGGAAAAACCCATCACTCTGTCCAAGAA GCATATGACACACTCTTACCCTTCACGAAAGAAAACCAAGTGTATGTACTCCTCAAATCTTTTGTGAGTTTACTTGTTTG TCCCGATGGATCTTCTTATGTTTGGGAGTCTCCCAATCCAAAACTTGCTACGATGGGAACGGGTGATTTACTTTCTGGAA TCCTCGCGCGCTATTTGAGTTTGGATTTGGACCTTTCTATTCCAGAAGCGGTGCAACTTTCTCTTTCCTTTCTCGACCAT TCGAAAGACCTAGAAGAACCCTATCCGTCTGCTCACCAAATCTTAAAATCCTTAGTGGAGTTACTCTAA
Upstream 100 bases:
>100_bases CCCACGTGGGCAGTGGAGGGAAACGTATACGGATGCCTTTGATACCATTTATTCTGTGAGAATTCGCTCTGGTGCACTTG AAGTGTATCGTTGGATTTAG
Downstream 100 bases:
>100_bases TGGGAAAAGGTTACCATTCACGATCCCCCGAAGAATTCCGGGACTATTTAAAACAAATTGGTGACAAACATAAAAGGACA AGGTGGCGCCAAATTGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Sugar Kinase; Carbohydrate Kinase; YjeF Family Protein; Carbohydrate Kinase Family Protein; Carbohydrate Kinase Yjef Related Protein; YjeF-Related Sugar Kinase; YjeF-Related Protein; YjeF Protein; Kinase; Carbohydrate Kinase YjeF-Related Protein; YjeF-Like Protein; Yjef Family Protein; Carbohydrate Kinase YjeF-Like Protein; Sugar Kinase N-Terminal Region; Carbohydrate Kinase Family; YjeF-Like Protein/Carbohydrate Kinase; Carbohydrate Kinase Yjef Like Protein; Sugar Kinase Domain-Containing Protein; Ribosomal Protein S; 30S Ribosomal Protein S; YjeF-Like Protein C-Terminus; Yjef-Like Protein; Short Chain Dehydrogenase Fused Sugar Kinase
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MKLIPLFTNQESKSMDSLAHTELGFSEQSLMGMAALSVFHANEDLWKTAESIWIVCGSGGNGGDGYALAHILFQEGYPVR VFQTSPNKNDAGKFYESLVQSSIGKTETIGNLNDFQTATESEDVDSVLLVDAILGTGFQNKVSKEITEAIFTINESEVFF YRLSLDTPSGWNPYGLGSSDTENQPFVFADSIEELGTRKWENVGYIYEKDNLIPRYYESIGFPIRTHLTNANFSNRYYLE KDPERAIQVLKRKNKDHKYSAGSALFYGGKEGMEGAILLSETAFSRLGGGISKIFSPSAKISQYVLKEDLSKMAMVSDFQ TMEEDPFFSKIKTLVVGPGLSEFPKGLDGWKLREGLACILDAGAIPNPGTKLPIGDKILLTPHVGELNRMTGKTHHSVQE AYDTLLPFTKENQVYVLLKSFVSLLVCPDGSSYVWESPNPKLATMGTGDLLSGILARYLSLDLDLSIPEAVQLSLSFLDH SKDLEEPYPSAHQILKSLVELL
Sequences:
>Translated_502_residues MKLIPLFTNQESKSMDSLAHTELGFSEQSLMGMAALSVFHANEDLWKTAESIWIVCGSGGNGGDGYALAHILFQEGYPVR VFQTSPNKNDAGKFYESLVQSSIGKTETIGNLNDFQTATESEDVDSVLLVDAILGTGFQNKVSKEITEAIFTINESEVFF YRLSLDTPSGWNPYGLGSSDTENQPFVFADSIEELGTRKWENVGYIYEKDNLIPRYYESIGFPIRTHLTNANFSNRYYLE KDPERAIQVLKRKNKDHKYSAGSALFYGGKEGMEGAILLSETAFSRLGGGISKIFSPSAKISQYVLKEDLSKMAMVSDFQ TMEEDPFFSKIKTLVVGPGLSEFPKGLDGWKLREGLACILDAGAIPNPGTKLPIGDKILLTPHVGELNRMTGKTHHSVQE AYDTLLPFTKENQVYVLLKSFVSLLVCPDGSSYVWESPNPKLATMGTGDLLSGILARYLSLDLDLSIPEAVQLSLSFLDH SKDLEEPYPSAHQILKSLVELL >Mature_502_residues MKLIPLFTNQESKSMDSLAHTELGFSEQSLMGMAALSVFHANEDLWKTAESIWIVCGSGGNGGDGYALAHILFQEGYPVR VFQTSPNKNDAGKFYESLVQSSIGKTETIGNLNDFQTATESEDVDSVLLVDAILGTGFQNKVSKEITEAIFTINESEVFF YRLSLDTPSGWNPYGLGSSDTENQPFVFADSIEELGTRKWENVGYIYEKDNLIPRYYESIGFPIRTHLTNANFSNRYYLE KDPERAIQVLKRKNKDHKYSAGSALFYGGKEGMEGAILLSETAFSRLGGGISKIFSPSAKISQYVLKEDLSKMAMVSDFQ TMEEDPFFSKIKTLVVGPGLSEFPKGLDGWKLREGLACILDAGAIPNPGTKLPIGDKILLTPHVGELNRMTGKTHHSVQE AYDTLLPFTKENQVYVLLKSFVSLLVCPDGSSYVWESPNPKLATMGTGDLLSGILARYLSLDLDLSIPEAVQLSLSFLDH SKDLEEPYPSAHQILKSLVELL
Specific function: Unknown
COG id: COG0063
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55465; Mature: 55465
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIPLFTNQESKSMDSLAHTELGFSEQSLMGMAALSVFHANEDLWKTAESIWIVCGSGG CEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHCCCEEEEEECCCC NGGDGYALAHILFQEGYPVRVFQTSPNKNDAGKFYESLVQSSIGKTETIGNLNDFQTATE CCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCC SEDVDSVLLVDAILGTGFQNKVSKEITEAIFTINESEVFFYRLSLDTPSGWNPYGLGSSD CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCC TENQPFVFADSIEELGTRKWENVGYIYEKDNLIPRYYESIGFPIRTHLTNANFSNRYYLE CCCCCEEEECCHHHHCCCCCCCCCEEEECCCCCHHHHHHCCCCCEEEEECCCCCCCEEEC KDPERAIQVLKRKNKDHKYSAGSALFYGGKEGMEGAILLSETAFSRLGGGISKIFSPSAK CCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEHHHHHHHHCCCHHHHHCCHHH ISQYVLKEDLSKMAMVSDFQTMEEDPFFSKIKTLVVGPGLSEFPKGLDGWKLREGLACIL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCHHHHCCCCCCHHHHHCCEEEE DAGAIPNPGTKLPIGDKILLTPHVGELNRMTGKTHHSVQEAYDTLLPFTKENQVYVLLKS ECCCCCCCCCCCCCCCEEEECCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEHHH FVSLLVCPDGSSYVWESPNPKLATMGTGDLLSGILARYLSLDLDLSIPEAVQLSLSFLDH HHHEEECCCCCCCEECCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC SKDLEEPYPSAHQILKSLVELL CCCCCCCCCHHHHHHHHHHHHC >Mature Secondary Structure MKLIPLFTNQESKSMDSLAHTELGFSEQSLMGMAALSVFHANEDLWKTAESIWIVCGSGG CEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHCCCEEEEEECCCC NGGDGYALAHILFQEGYPVRVFQTSPNKNDAGKFYESLVQSSIGKTETIGNLNDFQTATE CCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCC SEDVDSVLLVDAILGTGFQNKVSKEITEAIFTINESEVFFYRLSLDTPSGWNPYGLGSSD CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCC TENQPFVFADSIEELGTRKWENVGYIYEKDNLIPRYYESIGFPIRTHLTNANFSNRYYLE CCCCCEEEECCHHHHCCCCCCCCCEEEECCCCCHHHHHHCCCCCEEEEECCCCCCCEEEC KDPERAIQVLKRKNKDHKYSAGSALFYGGKEGMEGAILLSETAFSRLGGGISKIFSPSAK CCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEHHHHHHHHCCCHHHHHCCHHH ISQYVLKEDLSKMAMVSDFQTMEEDPFFSKIKTLVVGPGLSEFPKGLDGWKLREGLACIL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCHHHHCCCCCCHHHHHCCEEEE DAGAIPNPGTKLPIGDKILLTPHVGELNRMTGKTHHSVQEAYDTLLPFTKENQVYVLLKS ECCCCCCCCCCCCCCCEEEECCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEHHH FVSLLVCPDGSSYVWESPNPKLATMGTGDLLSGILARYLSLDLDLSIPEAVQLSLSFLDH HHHEEECCCCCCCEECCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC SKDLEEPYPSAHQILKSLVELL CCCCCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA