| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219764
Identifier: 183219764
GI number: 183219764
Start: 341575
End: 342549
Strand: Direct
Name: 183219764
Synonym: LEPBI_I0341
Alternate gene names: NA
Gene position: 341575-342549 (Clockwise)
Preceding gene: 183219763
Following gene: 183219765
Centisome position: 9.49
GC content: 38.56
Gene sequence:
>975_bases ATGGAATTACAAGAACAACATTCCACCTTACACCAATATAGTGGAAAACCGTTTTTAACAACGGTGGGAAAACCAATTCA TGCTCGTTCTCTCAAGGTGTTCCAAATCAATGTTGGCAGGTGGTGTAACCAGGCTTGTCGGCATTGCCATGTGGATGCAT CTCCCATTCGAACGGAAATGATGGAAAAAAAAACAGCAAAACTTTGTATTGAACTCATTTCCAAAATTCCAGAAATTGAA ACGGTAGACATCACAGGTGGTGCACCGGAAGGGAATTCCCATTTCAAATATCTTGTAACGGAAGCAAGGCGACTTGGCAA ACGTGTGATCGATCGCTGTAATCTGACCATTTTAGAAGAACCGGGTTTTGATTGGTTGTATGAGTTTCTAAAAGAAAACC AAGTAGAAATTGTCTCTTCTCTCCCTTCTGTATTGGAAAATGTAACCGACAACCAACGCGGAAAAGGTGTATTTCAAAAA TCTATCACCGCCTTAGAGAAGTTAAATGCGATTGGATATGGGACAACACTACCGATTCATTTGGTTTATAACCCCAATGG ACTTTTTTTAAGTTCTGGGCAGTCCCAATTAGAAAAAGAATTCAAAGAGAATTTGTTTAAAAAATATGGAATTGTTTTCA ACCAATTGTATTGTATCAACAACCTTCCCATCAATCGATTTTTAGGATCCCTTGTGAGAGCAGGAAAATTTGAAATGTAT ATGGAAACATTGGTGAACGCTTTCAATCTAAGTACAGTGAATGGCCTCATGTGTTTGGACCAAATTTCTGTGGGATATGA TGGGTCTGTGTATGATTGTGATTTTAACCAAATGTTAGAGCTGAAATCAAAAGAAGTCAAACACATACAAGATTTCGATT TGCTTTCTTATCTAAGTCGAGAAATCGTAGTAGCAAACCATTGTTATGGATGTACGGCTGGAGCAGGGTCTAGTTGTGGA GGGGAGATTGTATAA
Upstream 100 bases:
>100_bases GAATGAAGCTGTACATGTTGCGGCAGCCATGGCGGCAGGTATCAATTTAGTTCACAGTGTACAAATGCAAAATAAAATAG ACGAACTTTCGTTTTAGAGT
Downstream 100 bases:
>100_bases ATGTCGATTCAAAATGAAAAAGACCTTCAAGGGATTTTAAAAGCAGGAAAGTTTGTCGCAAAAGTCAGAGAGTTATTAAA ACTTTTGGCAAAACCTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; L-Asparaginase II; Radical SAM Superfamily Protein; Radical SAM Family Protein; Fe-S Oxidoreductases; NifB/MoaA Family Fe-S Oxidoreductase; Fe-S Oxidoreductase Of MoaA/NifB/PqqE Family
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MELQEQHSTLHQYSGKPFLTTVGKPIHARSLKVFQINVGRWCNQACRHCHVDASPIRTEMMEKKTAKLCIELISKIPEIE TVDITGGAPEGNSHFKYLVTEARRLGKRVIDRCNLTILEEPGFDWLYEFLKENQVEIVSSLPSVLENVTDNQRGKGVFQK SITALEKLNAIGYGTTLPIHLVYNPNGLFLSSGQSQLEKEFKENLFKKYGIVFNQLYCINNLPINRFLGSLVRAGKFEMY METLVNAFNLSTVNGLMCLDQISVGYDGSVYDCDFNQMLELKSKEVKHIQDFDLLSYLSREIVVANHCYGCTAGAGSSCG GEIV
Sequences:
>Translated_324_residues MELQEQHSTLHQYSGKPFLTTVGKPIHARSLKVFQINVGRWCNQACRHCHVDASPIRTEMMEKKTAKLCIELISKIPEIE TVDITGGAPEGNSHFKYLVTEARRLGKRVIDRCNLTILEEPGFDWLYEFLKENQVEIVSSLPSVLENVTDNQRGKGVFQK SITALEKLNAIGYGTTLPIHLVYNPNGLFLSSGQSQLEKEFKENLFKKYGIVFNQLYCINNLPINRFLGSLVRAGKFEMY METLVNAFNLSTVNGLMCLDQISVGYDGSVYDCDFNQMLELKSKEVKHIQDFDLLSYLSREIVVANHCYGCTAGAGSSCG GEIV >Mature_324_residues MELQEQHSTLHQYSGKPFLTTVGKPIHARSLKVFQINVGRWCNQACRHCHVDASPIRTEMMEKKTAKLCIELISKIPEIE TVDITGGAPEGNSHFKYLVTEARRLGKRVIDRCNLTILEEPGFDWLYEFLKENQVEIVSSLPSVLENVTDNQRGKGVFQK SITALEKLNAIGYGTTLPIHLVYNPNGLFLSSGQSQLEKEFKENLFKKYGIVFNQLYCINNLPINRFLGSLVRAGKFEMY METLVNAFNLSTVNGLMCLDQISVGYDGSVYDCDFNQMLELKSKEVKHIQDFDLLSYLSREIVVANHCYGCTAGAGSSCG GEIV
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36451; Mature: 36451
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELQEQHSTLHQYSGKPFLTTVGKPIHARSLKVFQINVGRWCNQACRHCHVDASPIRTEM CCCHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCHHHHHHH MEKKTAKLCIELISKIPEIETVDITGGAPEGNSHFKYLVTEARRLGKRVIDRCNLTILEE HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEC PGFDWLYEFLKENQVEIVSSLPSVLENVTDNQRGKGVFQKSITALEKLNAIGYGTTLPIH CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE LVYNPNGLFLSSGQSQLEKEFKENLFKKYGIVFNQLYCINNLPINRFLGSLVRAGKFEMY EEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHH METLVNAFNLSTVNGLMCLDQISVGYDGSVYDCDFNQMLELKSKEVKHIQDFDLLSYLSR HHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH EIVVANHCYGCTAGAGSSCGGEIV HHEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MELQEQHSTLHQYSGKPFLTTVGKPIHARSLKVFQINVGRWCNQACRHCHVDASPIRTEM CCCHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCHHHHHHH MEKKTAKLCIELISKIPEIETVDITGGAPEGNSHFKYLVTEARRLGKRVIDRCNLTILEE HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEC PGFDWLYEFLKENQVEIVSSLPSVLENVTDNQRGKGVFQKSITALEKLNAIGYGTTLPIH CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE LVYNPNGLFLSSGQSQLEKEFKENLFKKYGIVFNQLYCINNLPINRFLGSLVRAGKFEMY EEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHH METLVNAFNLSTVNGLMCLDQISVGYDGSVYDCDFNQMLELKSKEVKHIQDFDLLSYLSR HHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH EIVVANHCYGCTAGAGSSCGGEIV HHEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA