| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is mapA [H]
Identifier: 183219765
GI number: 183219765
Start: 342550
End: 343305
Strand: Direct
Name: mapA [H]
Synonym: LEPBI_I0342
Alternate gene names: 183219765
Gene position: 342550-343305 (Clockwise)
Preceding gene: 183219764
Following gene: 183219766
Centisome position: 9.52
GC content: 42.2
Gene sequence:
>756_bases ATGTCGATTCAAAATGAAAAAGACCTTCAAGGGATTTTAAAAGCAGGAAAGTTTGTCGCAAAAGTCAGAGAGTTATTAAA ACTTTTGGCAAAACCTGGTGTGTCTACTTTGGAACTTGATTTGGCCGCCAAACATGAGTTTGAAGCCGCAGGCGCATTTT CCGCTCCCAAATTTGATTACAAATTCCCTGGTTTCACTTGTATCAGTACCAATTTTGAAATCGCTCATGGCATTCCCAAA AAAGAAACCATTCTAAAAGAAGGGGATTTGGTGAATGTGGATGTTTCTGCGAAACTGGACGGTTATTATGCCGACACTGG GATTTCGTTTGTTGTGGGAAACTCCAACCAAACACTTCAAAAACTTTGTGAAACTGCCATCGAAGGCACCATGCGCGCCA CAAAACAAGCGTTTACTGGAAATTATCTTCGACATATTGGAAAAGAAATCCATTCGGCAGCCAAAGAAAATGGATTCACT GTGATTAAAAACTTAGCGGGCCATGGAACCGGTAAAAAACTCCATGAAGAACCGCAAGTTCTCGTTTATGAAGACAAACG TGACCATAGGAAACTAAACCAAGGCCTAGTCCTTGCCATTGAATCTTTTATTTCCACGGGAAGCCAAACGGCATATGAGG AAGCAGATGGATGGACACTCGTGGCAGGGAATAGACAAGGAACCCTTAGTTATGTGGCACAGTGTGAACACACAGTCATC GTTCAAAATGGCAAACCCATCATCGCGACTTTGTAA
Upstream 100 bases:
>100_bases CGATTTGCTTTCTTATCTAAGTCGAGAAATCGTAGTAGCAAACCATTGTTATGGATGTACGGCTGGAGCAGGGTCTAGTT GTGGAGGGGAGATTGTATAA
Downstream 100 bases:
>100_bases ACAGAGCTTGAAATAATCCCTTTCTTTGATTCGGATTTTGATTTTGATTCAGGTTCACATTTACATCAATTGGCCCAACT AAGTTTTTTCAGTGTTTGGT
Product: methionine aminopeptidase
Products: NA
Alternate protein names: MAP 2 [H]
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSIQNEKDLQGILKAGKFVAKVRELLKLLAKPGVSTLELDLAAKHEFEAAGAFSAPKFDYKFPGFTCISTNFEIAHGIPK KETILKEGDLVNVDVSAKLDGYYADTGISFVVGNSNQTLQKLCETAIEGTMRATKQAFTGNYLRHIGKEIHSAAKENGFT VIKNLAGHGTGKKLHEEPQVLVYEDKRDHRKLNQGLVLAIESFISTGSQTAYEEADGWTLVAGNRQGTLSYVAQCEHTVI VQNGKPIIATL
Sequences:
>Translated_251_residues MSIQNEKDLQGILKAGKFVAKVRELLKLLAKPGVSTLELDLAAKHEFEAAGAFSAPKFDYKFPGFTCISTNFEIAHGIPK KETILKEGDLVNVDVSAKLDGYYADTGISFVVGNSNQTLQKLCETAIEGTMRATKQAFTGNYLRHIGKEIHSAAKENGFT VIKNLAGHGTGKKLHEEPQVLVYEDKRDHRKLNQGLVLAIESFISTGSQTAYEEADGWTLVAGNRQGTLSYVAQCEHTVI VQNGKPIIATL >Mature_250_residues SIQNEKDLQGILKAGKFVAKVRELLKLLAKPGVSTLELDLAAKHEFEAAGAFSAPKFDYKFPGFTCISTNFEIAHGIPKK ETILKEGDLVNVDVSAKLDGYYADTGISFVVGNSNQTLQKLCETAIEGTMRATKQAFTGNYLRHIGKEIHSAAKENGFTV IKNLAGHGTGKKLHEEPQVLVYEDKRDHRKLNQGLVLAIESFISTGSQTAYEEADGWTLVAGNRQGTLSYVAQCEHTVIV QNGKPIIATL
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=243, Percent_Identity=33.3333333333333, Blast_Score=134, Evalue=9e-32, Organism=Homo sapiens, GI40385867, Length=241, Percent_Identity=30.7053941908714, Blast_Score=122, Evalue=2e-28, Organism=Escherichia coli, GI1786364, Length=252, Percent_Identity=35.3174603174603, Blast_Score=159, Evalue=1e-40, Organism=Caenorhabditis elegans, GI71996291, Length=225, Percent_Identity=33.7777777777778, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6323273, Length=242, Percent_Identity=33.8842975206612, Blast_Score=129, Evalue=5e-31, Organism=Drosophila melanogaster, GI21355531, Length=244, Percent_Identity=30.7377049180328, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24583427, Length=241, Percent_Identity=28.2157676348548, Blast_Score=99, Evalue=3e-21,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 27367; Mature: 27235
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQNEKDLQGILKAGKFVAKVRELLKLLAKPGVSTLELDLAAKHEFEAAGAFSAPKFDY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCCCCCCCCCC KFPGFTCISTNFEIAHGIPKKETILKEGDLVNVDVSAKLDGYYADTGISFVVGNSNQTLQ CCCCEEEEECCCHHHCCCCCHHHHHCCCCEEEEEEEEEECCEEECCCEEEEECCCCHHHH KLCETAIEGTMRATKQAFTGNYLRHIGKEIHSAAKENGFTVIKNLAGHGTGKKLHEEPQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCE LVYEDKRDHRKLNQGLVLAIESFISTGSQTAYEEADGWTLVAGNRQGTLSYVAQCEHTVI EEECCCHHHHHHHCCHHHHHHHHHCCCCCCHHHCCCCEEEEECCCCCHHHHHHHCCEEEE VQNGKPIIATL EECCCEEEEEC >Mature Secondary Structure SIQNEKDLQGILKAGKFVAKVRELLKLLAKPGVSTLELDLAAKHEFEAAGAFSAPKFDY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCCCCCCCCCC KFPGFTCISTNFEIAHGIPKKETILKEGDLVNVDVSAKLDGYYADTGISFVVGNSNQTLQ CCCCEEEEECCCHHHCCCCCHHHHHCCCCEEEEEEEEEECCEEECCCEEEEECCCCHHHH KLCETAIEGTMRATKQAFTGNYLRHIGKEIHSAAKENGFTVIKNLAGHGTGKKLHEEPQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCE LVYEDKRDHRKLNQGLVLAIESFISTGSQTAYEEADGWTLVAGNRQGTLSYVAQCEHTVI EEECCCHHHHHHHCCHHHHHHHHHCCCCCCHHHCCCCEEEEECCCCCHHHHHHHCCEEEE VQNGKPIIATL EECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]