| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219763
Identifier: 183219763
GI number: 183219763
Start: 341233
End: 341571
Strand: Direct
Name: 183219763
Synonym: LEPBI_I0340
Alternate gene names: NA
Gene position: 341233-341571 (Clockwise)
Preceding gene: 183219762
Following gene: 183219764
Centisome position: 9.48
GC content: 41.3
Gene sequence:
>339_bases ATGGCAGAAAATCATTATTACAATGCAAAAGACTTAGGAAAATTTGGAGAGATTGGTCGAACCAATCCAGCTCTTGCGGA TAAATTTTTTGGATACTACAATGCGGTGATGGCAGAAGGGGCCCTATCAGAACGAGAAAAAGCACTCATCGCACTTGCTG TTGCCCATGCTCTCAAATGTCCATACTGCATTGATGCATATACTACCACCTCACTTCAAAAAGGTGCTGATGAAGCACAA ATGAATGAAGCTGTACATGTTGCGGCAGCCATGGCGGCAGGTATCAATTTAGTTCACAGTGTACAAATGCAAAATAAAAT AGACGAACTTTCGTTTTAG
Upstream 100 bases:
>100_bases TAAGATATTGACCGAACCTAAAACCTTTTTGAATTCCCAAGACAGTGCTTGCCCTTGACGAAAAGAGAAAGGTCAAAAAA AATCATCATAGAGGGAATGT
Downstream 100 bases:
>100_bases AGTATGGAATTACAAGAACAACATTCCACCTTACACCAATATAGTGGAAAACCGTTTTTAACAACGGTGGGAAAACCAAT TCATGCTCGTTCTCTCAAGG
Product: putative 4-carboxymuconolactone decarboxylase
Products: 4,5-dihydro-5-oxofuran-2-acetate; CO2
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MAENHYYNAKDLGKFGEIGRTNPALADKFFGYYNAVMAEGALSEREKALIALAVAHALKCPYCIDAYTTTSLQKGADEAQ MNEAVHVAAAMAAGINLVHSVQMQNKIDELSF
Sequences:
>Translated_112_residues MAENHYYNAKDLGKFGEIGRTNPALADKFFGYYNAVMAEGALSEREKALIALAVAHALKCPYCIDAYTTTSLQKGADEAQ MNEAVHVAAAMAAGINLVHSVQMQNKIDELSF >Mature_111_residues AENHYYNAKDLGKFGEIGRTNPALADKFFGYYNAVMAEGALSEREKALIALAVAHALKCPYCIDAYTTTSLQKGADEAQM NEAVHVAAAMAAGINLVHSVQMQNKIDELSF
Specific function: Unknown
COG id: COG0599
COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004675 - InterPro: IPR003779 [H]
Pfam domain/function: PF02627 CMD [H]
EC number: 4.1.1.44
Molecular weight: Translated: 12144; Mature: 12013
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAENHYYNAKDLGKFGEIGRTNPALADKFFGYYNAVMAEGALSEREKALIALAVAHALKC CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC PYCIDAYTTTSLQKGADEAQMNEAVHVAAAMAAGINLVHSVQMQNKIDELSF CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AENHYYNAKDLGKFGEIGRTNPALADKFFGYYNAVMAEGALSEREKALIALAVAHALKC CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC PYCIDAYTTTSLQKGADEAQMNEAVHVAAAMAAGINLVHSVQMQNKIDELSF CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate
Specific reaction: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 4,5-dihydro-5-oxofuran-2-acetate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA