| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is rsbP [H]
Identifier: 183219729
GI number: 183219729
Start: 299041
End: 301002
Strand: Reverse
Name: rsbP [H]
Synonym: LEPBI_I0305
Alternate gene names: 183219729
Gene position: 301002-299041 (Counterclockwise)
Preceding gene: 183219730
Following gene: 183219728
Centisome position: 8.36
GC content: 34.86
Gene sequence:
>1962_bases ATGCGGATTTTATATCTCTTCATTCTGTCGGGAAGTTTGTTTTCCTGTTCCCGTTGGGAGATCCAAAAGTCGATCAGTGA TGAAAGTTTTGTCCCACAAAAAATTGATTATGTGATCCATGCGGGTGATGATGTTAATTTTCAAAAACTAAGATGGACAC CTATCTTCAAAAACAATTTGAGTTTAGGATTTCAAACGGAACATGTTTATCTTAAGATAAAAGCAACAAACCAAACATCT GTAAACAAACTGATTTTAGATTTGGGCAATCCTCATTTGGATTTTATCCGTGTGTATGAAGAAGGAAATCCTGAACCCAT AAGTGAAGGTGGTGATTTTATTGCCCATTCCCACTGGGATGCATTTTCTAAGTCTATTGCATTTGAGTTGAATTGGCCTA GTGGTGAAACCAAAACATTGATTTTGGAAACCAAATCATCATCAAATATTAGTTATCTGATCCGATTTTACTCCAAAGAA ACTTTTTATTTAAAAGAAAATTTAGAAAACACAATCCTTGGTTTTTTTTATGGCACCATCTTTATCATGGTGATTTACAA TTTATTCATATATTTCATTTTAAAAGAAAAAGCCTACATCACCTATTCCATCTCCATTTTTTGCAATTTGTTATTACAGA TGTATCTGAATGGAATTCTAAACCAAGTTTTTACATTAGACCATCCAGAAATCCACAATCGAATAGGAAGTATCATTGTA ACTTGTTCGGCAATTACAGGTTGGACGTTTGCCCAACAAACATTGAACTTACGAGAGTTTAATCCTTGGTCCAATCGACT CATCCAATCCTTAAAATACCTCGTATTGTTTTATATATTGATTCCATATGCTTATTTACCAATTGACATCGCTGTTCGGA TCGGGAATTTTATTGCTCAGTTGTTTGTTGTCTCTGTCCTTGTTGTTGCCCTTGTCAACTATAGCACAGGAAATAAGCAA GCTCGTTTGTTTTTGTTTGGTTGGATAACACTTCTATTTGGAATTTTAATGTATACGTTGATGCAAAATGGAATCTTACC TGTAAACGTATTCACTATCTATGGTAACCAAATTGGATCTACTTTAGAAGCAGGGATTTTATCTCTCGCACTTGCCAACA AAATCAATGAACTGAAAGAAGAAAAAGCAAACACACAAGCGGAAGCACTCGTCACTTTAGAAGAAAAAGTAAGAGAGCGC ACGAAAACATTAGATGAATCGCTAAACCTTATCAAAAAAGATCTGAATGTTGCGAAAAAAATTCAAAAAACATTATTCTC TGATATCAAAACCAGCGACCCAAGAATCCATTTTCATTCCTATTATCAATCCATGTCGGAAGTGGGTGGTGACTTTTATG ATCTCACCCAAGTCAAGGCAGACTATTATCGAATTTTCGTAGCTGATGCCACGGGTCACGGAATCCAAGCTGCACTGATC ACAATGGCAATCAAAGCAGAGTATGAATCATTAAAAATGATTTATGACCATCCAGATGATTTGGTTTTTCATATGAACCA AATTTTTATCAATAAATATAGTAACATCCAAACCATTTTTACTTGTTCTGTTTGCGATATTGATTTAAAAAACAAACAGT TGTTTTACGCATCTGCGGGCCACCCCGACCAGATCCACCAAAGAATTCATGACATCAAACTATTACCAAGAACAGGAAAA ATCATTGGTCTTATGGATCATACTCAATATCGCCTCATTGAACATCAAATTGAAGAAGGAGATCGTATCTTTTTGTTCAC AGATGGTATCTTCGAACAATTTAACGAAGAAAAAGAACTGTTTGGTGAAGATCGTTTGTATGAAATCTTAAAAGAAAACT TAAAACTGAGTTTGGACCATACAATGGCAAAAGTGTTAAGTGAACTCTCTTTGTTCACTGATGGACAAGCAAAACAAGAC GACATTACATTTATCGGTTGCGAAATTCAAAGTCTCAGTTGA
Upstream 100 bases:
>100_bases TTTCTGATCGTTTGGTGGAAACGGCAAAATCAAACGGATATTCTTTGCGATAAATTTGCTTTGACAAAACCCATTTTTTA TTGGGAAATCATTCGAGTTT
Downstream 100 bases:
>100_bases CTTTGATCCATGTCGTACACTGAAATTCCTAATTTTACTAAACCATTCATCCATCCAAATGCTACAGCATTCGGAATGAT TGAATATGGAACTTCCGTTT
Product: putative phosphoserine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 653; Mature: 653
Protein sequence:
>653_residues MRILYLFILSGSLFSCSRWEIQKSISDESFVPQKIDYVIHAGDDVNFQKLRWTPIFKNNLSLGFQTEHVYLKIKATNQTS VNKLILDLGNPHLDFIRVYEEGNPEPISEGGDFIAHSHWDAFSKSIAFELNWPSGETKTLILETKSSSNISYLIRFYSKE TFYLKENLENTILGFFYGTIFIMVIYNLFIYFILKEKAYITYSISIFCNLLLQMYLNGILNQVFTLDHPEIHNRIGSIIV TCSAITGWTFAQQTLNLREFNPWSNRLIQSLKYLVLFYILIPYAYLPIDIAVRIGNFIAQLFVVSVLVVALVNYSTGNKQ ARLFLFGWITLLFGILMYTLMQNGILPVNVFTIYGNQIGSTLEAGILSLALANKINELKEEKANTQAEALVTLEEKVRER TKTLDESLNLIKKDLNVAKKIQKTLFSDIKTSDPRIHFHSYYQSMSEVGGDFYDLTQVKADYYRIFVADATGHGIQAALI TMAIKAEYESLKMIYDHPDDLVFHMNQIFINKYSNIQTIFTCSVCDIDLKNKQLFYASAGHPDQIHQRIHDIKLLPRTGK IIGLMDHTQYRLIEHQIEEGDRIFLFTDGIFEQFNEEKELFGEDRLYEILKENLKLSLDHTMAKVLSELSLFTDGQAKQD DITFIGCEIQSLS
Sequences:
>Translated_653_residues MRILYLFILSGSLFSCSRWEIQKSISDESFVPQKIDYVIHAGDDVNFQKLRWTPIFKNNLSLGFQTEHVYLKIKATNQTS VNKLILDLGNPHLDFIRVYEEGNPEPISEGGDFIAHSHWDAFSKSIAFELNWPSGETKTLILETKSSSNISYLIRFYSKE TFYLKENLENTILGFFYGTIFIMVIYNLFIYFILKEKAYITYSISIFCNLLLQMYLNGILNQVFTLDHPEIHNRIGSIIV TCSAITGWTFAQQTLNLREFNPWSNRLIQSLKYLVLFYILIPYAYLPIDIAVRIGNFIAQLFVVSVLVVALVNYSTGNKQ ARLFLFGWITLLFGILMYTLMQNGILPVNVFTIYGNQIGSTLEAGILSLALANKINELKEEKANTQAEALVTLEEKVRER TKTLDESLNLIKKDLNVAKKIQKTLFSDIKTSDPRIHFHSYYQSMSEVGGDFYDLTQVKADYYRIFVADATGHGIQAALI TMAIKAEYESLKMIYDHPDDLVFHMNQIFINKYSNIQTIFTCSVCDIDLKNKQLFYASAGHPDQIHQRIHDIKLLPRTGK IIGLMDHTQYRLIEHQIEEGDRIFLFTDGIFEQFNEEKELFGEDRLYEILKENLKLSLDHTMAKVLSELSLFTDGQAKQD DITFIGCEIQSLS >Mature_653_residues MRILYLFILSGSLFSCSRWEIQKSISDESFVPQKIDYVIHAGDDVNFQKLRWTPIFKNNLSLGFQTEHVYLKIKATNQTS VNKLILDLGNPHLDFIRVYEEGNPEPISEGGDFIAHSHWDAFSKSIAFELNWPSGETKTLILETKSSSNISYLIRFYSKE TFYLKENLENTILGFFYGTIFIMVIYNLFIYFILKEKAYITYSISIFCNLLLQMYLNGILNQVFTLDHPEIHNRIGSIIV TCSAITGWTFAQQTLNLREFNPWSNRLIQSLKYLVLFYILIPYAYLPIDIAVRIGNFIAQLFVVSVLVVALVNYSTGNKQ ARLFLFGWITLLFGILMYTLMQNGILPVNVFTIYGNQIGSTLEAGILSLALANKINELKEEKANTQAEALVTLEEKVRER TKTLDESLNLIKKDLNVAKKIQKTLFSDIKTSDPRIHFHSYYQSMSEVGGDFYDLTQVKADYYRIFVADATGHGIQAALI TMAIKAEYESLKMIYDHPDDLVFHMNQIFINKYSNIQTIFTCSVCDIDLKNKQLFYASAGHPDQIHQRIHDIKLLPRTGK IIGLMDHTQYRLIEHQIEEGDRIFLFTDGIFEQFNEEKELFGEDRLYEILKENLKLSLDHTMAKVLSELSLFTDGQAKQD DITFIGCEIQSLS
Specific function: Positive regulator of sigma-B activity. Dephosphorylates rsbV in response to energy stress [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF00989 PAS; PF07228 SpoIIE [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 75215; Mature: 75215
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILYLFILSGSLFSCSRWEIQKSISDESFVPQKIDYVIHAGDDVNFQKLRWTPIFKNNL CEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCC SLGFQTEHVYLKIKATNQTSVNKLILDLGNPHLDFIRVYEEGNPEPISEGGDFIAHSHWD CCCEEEEEEEEEEEECCCCCHHHHHEECCCCCEEEEEEEECCCCCCCCCCCCEEEECCHH AFSKSIAFELNWPSGETKTLILETKSSSNISYLIRFYSKETFYLKENLENTILGFFYGTI HHCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEHHCCCHHHHHHHHHHH FIMVIYNLFIYFILKEKAYITYSISIFCNLLLQMYLNGILNQVFTLDHPEIHNRIGSIIV HHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEE TCSAITGWTFAQQTLNLREFNPWSNRLIQSLKYLVLFYILIPYAYLPIDIAVRIGNFIAQ EEEHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LFVVSVLVVALVNYSTGNKQARLFLFGWITLLFGILMYTLMQNGILPVNVFTIYGNQIGS HHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHCH TLEAGILSLALANKINELKEEKANTQAEALVTLEEKVRERTKTLDESLNLIKKDLNVAKK HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQKTLFSDIKTSDPRIHFHSYYQSMSEVGGDFYDLTQVKADYYRIFVADATGHGIQAALI HHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHCCEEEEEEEEECCCCCHHHHHH TMAIKAEYESLKMIYDHPDDLVFHMNQIFINKYSNIQTIFTCSVCDIDLKNKQLFYASAG HHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCEEEEECCC HPDQIHQRIHDIKLLPRTGKIIGLMDHTQYRLIEHQIEEGDRIFLFTDGIFEQFNEEKEL CHHHHHHHHHHEEEECCCCCEEEEECCHHHHHHHHHHCCCCEEEEEECHHHHHHCCHHHH FGEDRLYEILKENLKLSLDHTMAKVLSELSLFTDGQAKQDDITFIGCEIQSLS CCCHHHHHHHHHHCCEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCC >Mature Secondary Structure MRILYLFILSGSLFSCSRWEIQKSISDESFVPQKIDYVIHAGDDVNFQKLRWTPIFKNNL CEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCC SLGFQTEHVYLKIKATNQTSVNKLILDLGNPHLDFIRVYEEGNPEPISEGGDFIAHSHWD CCCEEEEEEEEEEEECCCCCHHHHHEECCCCCEEEEEEEECCCCCCCCCCCCEEEECCHH AFSKSIAFELNWPSGETKTLILETKSSSNISYLIRFYSKETFYLKENLENTILGFFYGTI HHCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEHHCCCHHHHHHHHHHH FIMVIYNLFIYFILKEKAYITYSISIFCNLLLQMYLNGILNQVFTLDHPEIHNRIGSIIV HHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEE TCSAITGWTFAQQTLNLREFNPWSNRLIQSLKYLVLFYILIPYAYLPIDIAVRIGNFIAQ EEEHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LFVVSVLVVALVNYSTGNKQARLFLFGWITLLFGILMYTLMQNGILPVNVFTIYGNQIGS HHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHCH TLEAGILSLALANKINELKEEKANTQAEALVTLEEKVRERTKTLDESLNLIKKDLNVAKK HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQKTLFSDIKTSDPRIHFHSYYQSMSEVGGDFYDLTQVKADYYRIFVADATGHGIQAALI HHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHCCEEEEEEEEECCCCCHHHHHH TMAIKAEYESLKMIYDHPDDLVFHMNQIFINKYSNIQTIFTCSVCDIDLKNKQLFYASAG HHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCEEEEECCC HPDQIHQRIHDIKLLPRTGKIIGLMDHTQYRLIEHQIEEGDRIFLFTDGIFEQFNEEKEL CHHHHHHHHHHEEEECCCCCEEEEECCHHHHHHHHHHCCCCEEEEEECHHHHHHCCHHHH FGEDRLYEILKENLKLSLDHTMAKVLSELSLFTDGQAKQDDITFIGCEIQSLS CCCHHHHHHHHHHCCEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 10632888 [H]