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The map label for this gene is yrdA [C]

Identifier: 183219728

GI number: 183219728

Start: 298459

End: 299031

Strand: Reverse

Name: yrdA [C]

Synonym: LEPBI_I0304

Alternate gene names: 183219728

Gene position: 299031-298459 (Counterclockwise)

Preceding gene: 183219729

Following gene: 183219727

Centisome position: 8.31

GC content: 40.49

Gene sequence:

>573_bases
ATGTCGTACACTGAAATTCCTAATTTTACTAAACCATTCATCCATCCAAATGCTACAGCATTCGGAATGATTGAATATGG
AACTTCCGTTTCCATTTGGCCTGGTGCTGTCGTCCGCGCAGATATGAACCAAATTAAATTGGGAAATTTTGTCAATATCC
AAGATAACTCCACTCTACACACAGACTCTACAAGTCCAATTTCCATTGGTGAGTATACATTAGTTGGTCATAACGTGATG
ATCCACGGTTGCAAAATTGGAAGGGCTGTACTGATTGGCATTGGTTCTATTGTTCTCGACAATGCTGAAATCGGAGATGG
TTCTCAAATTGCAGCAGGTTGTATGATTCGCGGAGGAAAAAAAATCCCACCACGATCCCTTGTGGTTCCCGATGGTTCTG
ATATCAAAATTTTCGAAAGGAAGGCCAAACCAGAACTCACAGTCGCTGGATGCATAGAGTATGCTCACCTATCCGTACGT
TTTGCACAAAATCAATTTTTACCGTTTCAAAAAGAAGAAGAAGTTCATTTTGTCACGCAAGCCAAAGAAATCTTGCTTAA
ACTGGGAATTTAG

Upstream 100 bases:

>100_bases
AGTGTTAAGTGAACTCTCTTTGTTCACTGATGGACAAGCAAAACAAGACGACATTACATTTATCGGTTGCGAAATTCAAA
GTCTCAGTTGACTTTGATCC

Downstream 100 bases:

>100_bases
ATGCAGTGGATATGATACGATCTGTCTAACCAAACAAATGAGAATCAAATTTCCATAAACGGGTCCAATCAACATTTCCT
ACTATGAATCATTTCTTAAA

Product: carbonic anhydrase/acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSYTEIPNFTKPFIHPNATAFGMIEYGTSVSIWPGAVVRADMNQIKLGNFVNIQDNSTLHTDSTSPISIGEYTLVGHNVM
IHGCKIGRAVLIGIGSIVLDNAEIGDGSQIAAGCMIRGGKKIPPRSLVVPDGSDIKIFERKAKPELTVAGCIEYAHLSVR
FAQNQFLPFQKEEEVHFVTQAKEILLKLGI

Sequences:

>Translated_190_residues
MSYTEIPNFTKPFIHPNATAFGMIEYGTSVSIWPGAVVRADMNQIKLGNFVNIQDNSTLHTDSTSPISIGEYTLVGHNVM
IHGCKIGRAVLIGIGSIVLDNAEIGDGSQIAAGCMIRGGKKIPPRSLVVPDGSDIKIFERKAKPELTVAGCIEYAHLSVR
FAQNQFLPFQKEEEVHFVTQAKEILLKLGI
>Mature_189_residues
SYTEIPNFTKPFIHPNATAFGMIEYGTSVSIWPGAVVRADMNQIKLGNFVNIQDNSTLHTDSTSPISIGEYTLVGHNVMI
HGCKIGRAVLIGIGSIVLDNAEIGDGSQIAAGCMIRGGKKIPPRSLVVPDGSDIKIFERKAKPELTVAGCIEYAHLSVRF
AQNQFLPFQKEEEVHFVTQAKEILLKLGI

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=167, Percent_Identity=32.3353293413174, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1787667, Length=165, Percent_Identity=32.1212121212121, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI87081681, Length=117, Percent_Identity=34.1880341880342, Blast_Score=78, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20680; Mature: 20549

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYTEIPNFTKPFIHPNATAFGMIEYGTSVSIWPGAVVRADMNQIKLGNFVNIQDNSTLH
CCCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCEEEEECCCEEECCCEEEECCCCEEE
TDSTSPISIGEYTLVGHNVMIHGCKIGRAVLIGIGSIVLDNAEIGDGSQIAAGCMIRGGK
CCCCCCEECCCEEEEECEEEEEEECCCEEEEEEECEEEEECCCCCCCCEEEEEEEEECCC
KIPPRSLVVPDGSDIKIFERKAKPELTVAGCIEYAHLSVRFAQNQFLPFQKEEEVHFVTQ
CCCCCEEEECCCCCEEEEEECCCCCEEEEHEEEEEEEEEEEECCCCCCCCCCCCCHHHHH
AKEILLKLGI
HHHHHHCCCC
>Mature Secondary Structure 
SYTEIPNFTKPFIHPNATAFGMIEYGTSVSIWPGAVVRADMNQIKLGNFVNIQDNSTLH
CCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCEEEEECCCEEECCCEEEECCCCEEE
TDSTSPISIGEYTLVGHNVMIHGCKIGRAVLIGIGSIVLDNAEIGDGSQIAAGCMIRGGK
CCCCCCEECCCEEEEECEEEEEEECCCEEEEEEECEEEEECCCCCCCCEEEEEEEEECCC
KIPPRSLVVPDGSDIKIFERKAKPELTVAGCIEYAHLSVRFAQNQFLPFQKEEEVHFVTQ
CCCCCEEEECCCCCEEEEEECCCCCEEEEHEEEEEEEEEEEECCCCCCCCCCCCCHHHHH
AKEILLKLGI
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]