| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
Click here to switch to the map view.
The map label for this gene is 182680219
Identifier: 182680219
GI number: 182680219
Start: 3773999
End: 3774673
Strand: Reverse
Name: 182680219
Synonym: Bind_3317
Alternate gene names: NA
Gene position: 3774673-3773999 (Counterclockwise)
Preceding gene: 182680220
Following gene: 182680212
Centisome position: 90.52
GC content: 58.52
Gene sequence:
>675_bases ATGAAACAGTGCGATTTCATTTTCATGCTCACACGCAATGATCGAACCGTGCCGGATGCCGCCCGACATGTCGAAACCGC CTGTAAAGCGGGAATTCGCCATATTGGTTTCAAGGATGTTGGGCTGCCTTTCACCGCGCTCCGCGATCTCACCCGGCAGA TCCGGGCGGGCTCTGCGTCTATCTATCTCGAGGTTGTCTCTCTCGACCGGGAGAGTGAAATCAGATCTGTGGAGGCGGCG GTTGATCTGGGCGTCGATTACCTGCTCGGCGGCACCCATGTGGAGGATGTCGTCCGGCTTCTGGAAGACTCGAAGATCCG CTATTATCCTTTTCCTGGACGAATTGTCGGCCATCCCAGCATCCTCATGGGATCGACGTCCGATATCGTCGCCAGTGCCC GGACTCTGGCCGCCTATTCAGGCGTACACGGTCTTGATCTGCTCGCCTATCGCTCGGCAAATGACGGACCATCCCTGATA AAAGCGGTCTGCAGCGCCATCGACAAACCGGTCATTATCGCAGGATCGGTGGATCGACCGGAACGGATCGAGGCCATCCG CAAGGGAGGAGCAGCCGGCTTTACGGTCGGCACATCCGCTCTGGATGGGCGCTTTCCAGGAGGGGGCCCCAATCTGGACG ATCAGTTGGCGGCAATCGCCGGCTTCGCGGGATAA
Upstream 100 bases:
>100_bases TTGCGGGGCGTGGCATTGCTGATTCTTCCAGCCTCGAGACAGCGTTCGATTATGCTACACGGCTGAAGGTTCCGACTCCC TTCTTCTCTGGAGCCATGTC
Downstream 100 bases:
>100_bases TTTGACGCGGTCACAAAGACGAGCAGCATCGCTCGTGAATGCGACTTTACGAGCGATGCTTCAGAGCAGACGAGTTTGAC ACCCTTGAGTGGCATTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin Domain Protein
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MKQCDFIFMLTRNDRTVPDAARHVETACKAGIRHIGFKDVGLPFTALRDLTRQIRAGSASIYLEVVSLDRESEIRSVEAA VDLGVDYLLGGTHVEDVVRLLEDSKIRYYPFPGRIVGHPSILMGSTSDIVASARTLAAYSGVHGLDLLAYRSANDGPSLI KAVCSAIDKPVIIAGSVDRPERIEAIRKGGAAGFTVGTSALDGRFPGGGPNLDDQLAAIAGFAG
Sequences:
>Translated_224_residues MKQCDFIFMLTRNDRTVPDAARHVETACKAGIRHIGFKDVGLPFTALRDLTRQIRAGSASIYLEVVSLDRESEIRSVEAA VDLGVDYLLGGTHVEDVVRLLEDSKIRYYPFPGRIVGHPSILMGSTSDIVASARTLAAYSGVHGLDLLAYRSANDGPSLI KAVCSAIDKPVIIAGSVDRPERIEAIRKGGAAGFTVGTSALDGRFPGGGPNLDDQLAAIAGFAG >Mature_224_residues MKQCDFIFMLTRNDRTVPDAARHVETACKAGIRHIGFKDVGLPFTALRDLTRQIRAGSASIYLEVVSLDRESEIRSVEAA VDLGVDYLLGGTHVEDVVRLLEDSKIRYYPFPGRIVGHPSILMGSTSDIVASARTLAAYSGVHGLDLLAYRSANDGPSLI KAVCSAIDKPVIIAGSVDRPERIEAIRKGGAAGFTVGTSALDGRFPGGGPNLDDQLAAIAGFAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23796; Mature: 23796
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQCDFIFMLTRNDRTVPDAARHVETACKAGIRHIGFKDVGLPFTALRDLTRQIRAGSAS CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCE IYLEVVSLDRESEIRSVEAAVDLGVDYLLGGTHVEDVVRLLEDSKIRYYPFPGRIVGHPS EEEEEEECCCHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHCCCEEEECCCCCEECCCC ILMGSTSDIVASARTLAAYSGVHGLDLLAYRSANDGPSLIKAVCSAIDKPVIIAGSVDRP EEECCCHHHHHHHHHHHHHCCCCCHHEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCH ERIEAIRKGGAAGFTVGTSALDGRFPGGGPNLDDQLAAIAGFAG HHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MKQCDFIFMLTRNDRTVPDAARHVETACKAGIRHIGFKDVGLPFTALRDLTRQIRAGSAS CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCE IYLEVVSLDRESEIRSVEAAVDLGVDYLLGGTHVEDVVRLLEDSKIRYYPFPGRIVGHPS EEEEEEECCCHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHCCCEEEECCCCCEECCCC ILMGSTSDIVASARTLAAYSGVHGLDLLAYRSANDGPSLIKAVCSAIDKPVIIAGSVDRP EEECCCHHHHHHHHHHHHHCCCCCHHEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCH ERIEAIRKGGAAGFTVGTSALDGRFPGGGPNLDDQLAAIAGFAG HHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA