| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182680000
Identifier: 182680000
GI number: 182680000
Start: 3540795
End: 3542738
Strand: Reverse
Name: 182680000
Synonym: Bind_3096
Alternate gene names: NA
Gene position: 3542738-3540795 (Counterclockwise)
Preceding gene: 182680001
Following gene: 182679999
Centisome position: 84.95
GC content: 61.93
Gene sequence:
>1944_bases ATGAAATCCGATATCATCGAACGGCTTGGAGAGAGTGAAATCCTCCTGCCATCGCTTATCCAGGATGGTCTGCACGCGAA CGATCAGGTCAAGCTTCGTCTTGCCGTTCTGCAAGCAGCCGCCCGGCGTGCCCAAAACCCTACAGTGCCTCCCTTCGACC TCCAGGATGAATGCCGCGCTGCCGGCATTGATCCCTTGCCGATGGAAACGCTGGTTCAGAACGCGCGGCTTGTGGATCCC GGCAGGATCAGTGCGCCCGGCCTCGACACGCTCGCCGCCGCGATCTGGCAGGATGTCACGACCATGGCCAATTCCGTCAA GGCCGGAGACCAGACCGCCGGTGAGGCCGGGCTTGCTCGTCTTGCAGCCTTGCAGGCGGCCTTGAAAGACAAGCCGGAAA ACCAGGGCCCCGCCGACACTATGGCCGTGACGCGGATCGCCCAATTGGGTGCTCTTTCCGCACACCATGAGGATAGTCTG CATCGCCTTGTCATGGATCTCCATAAGGCCTTGAACCAGCTTGCGGCGGCCCATGCGGAAGAGATTTGCGCCGGCGCTCA TGTCTATGGTCTGACGCCAGAGGATCGCCCCCTGGTCGAGGCCTTCATGCGCGGGTTGGAGTCGACCCGGAAACTGAAAT TCAACCATCCGGGCCTCGCCACCACGGCCATGCGCAGCACCGGCAAATTGGTCATCCAGAACGATATCGGAGAGACCGAA GCGCATGTGGTGGTCATTACCATAGATCCGGCTGCTGTCACCATCACGTATACGGATGTGCATCTCGATCGCGCGCGATT CTTTGCCAACTTGTTCGACGCTTTCGCCGTGCAATGGAGCGGCCTTGAACGCAAGGACGCTCAAGGCATCGGCGACGAGG AACCTTTCTATCTCACGACCGGCCGTTTTGCGGCGGTAGATCAGGCGCATCGCTCCGCTTTCCTGGCGGCGCTTGGCTCC AGCCTGGTGTTTCTGATCGATTGGAACAAGGCCCGCAAGCTCCTGCGGACCTGGATGTCCAAGGCCGATGCCGGACACAT TCTCGAATGGGCGGCTCGTAACCGTTTCGGCCATCGCGCCTTTCTCGAATTGGGCGGTGGCGATCTTATCGCCTCGGCGG TGCGCAATACGACGCCCACACGGATTGGCTTCGGTGAGCGTCTCGATCATGCGCTCGGCCGTGAGGCGGCGGTGGATTTC CTCAAAAACGCGCTGCGCGTCGCGAGCGAAACCTTGCTCGCCGGCAGTTCAGTCCGGCTGGCGCGCGATCGCATCGAAGC CGATCTGATGCGGCGGCTGCAAAGCGTCGACAGTTCTTTGTTGTCGATCGTTGTGCGCCAGGCGGGCCTTGCGCGTGATA TTGCTGACGCTATCGCCCATTTGATCGCGGCGCGGAGCAAGGGGCAGGCGATCGATGCTGACCGGGCGGCCGCGAATGCG CGGCATATCGAAGAGAAAGCCGACCGCATGGCGGTCGCGGCGCGGGTTGAAATCGCCCGGCTCAATGCCGACCGCGCGAT TGAAAGCCTCGTCAACCGCGTGGAAGAGACGATCGACGAATTCGAACAAGCGGCCTTCATCGCCTCGCTGATTCCGGAAG ATTTGCCGGCCGATCTGTTGAAACCGCTTGGCGATCTGAGTGCGGCGGCGGTGGGGAGCACGCAGGCCATGGCCATCGGC GCCGTCGCGGCCATGGATGTTCCGCAAGGCCAGCGTGTCGATACGGAGGACGCGCTTGAGGCCTGTGTTCAACTGGCCGA TTACGAACATCGGGCGGATGAAGCCGAACGCACGCTCACGCGCCTGGTGTTGCGCGGCAGTTTCGATCTGCGGACCTCTC TCTCCGTCATGGAATTAGCGCGCGCCCTTGAACGCGCGACCGATCGGCTGGCTGGCGCGGGTGGCCTGCTGCGTGACCAC GTGCTGGCCGATCTCTCGAAATAA
Upstream 100 bases:
>100_bases CAATCTTCTATAAGGGAGAATGCGTCATTCAACTGTCACACGGCTGACGCACGAATCGTTCAAGGGGGATCATTATTCAC CAAGGTCCCAGGGTGCACCG
Downstream 100 bases:
>100_bases TTTTTTCAAACTCCATCATCGGAACTTCTTCATGCAGATCGTGCGTATCGCGACCGGAACGAACGAGGCACATTCCGCAG ATCTCATCGGAGCGAAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 647; Mature: 647
Protein sequence:
>647_residues MKSDIIERLGESEILLPSLIQDGLHANDQVKLRLAVLQAAARRAQNPTVPPFDLQDECRAAGIDPLPMETLVQNARLVDP GRISAPGLDTLAAAIWQDVTTMANSVKAGDQTAGEAGLARLAALQAALKDKPENQGPADTMAVTRIAQLGALSAHHEDSL HRLVMDLHKALNQLAAAHAEEICAGAHVYGLTPEDRPLVEAFMRGLESTRKLKFNHPGLATTAMRSTGKLVIQNDIGETE AHVVVITIDPAAVTITYTDVHLDRARFFANLFDAFAVQWSGLERKDAQGIGDEEPFYLTTGRFAAVDQAHRSAFLAALGS SLVFLIDWNKARKLLRTWMSKADAGHILEWAARNRFGHRAFLELGGGDLIASAVRNTTPTRIGFGERLDHALGREAAVDF LKNALRVASETLLAGSSVRLARDRIEADLMRRLQSVDSSLLSIVVRQAGLARDIADAIAHLIAARSKGQAIDADRAAANA RHIEEKADRMAVAARVEIARLNADRAIESLVNRVEETIDEFEQAAFIASLIPEDLPADLLKPLGDLSAAAVGSTQAMAIG AVAAMDVPQGQRVDTEDALEACVQLADYEHRADEAERTLTRLVLRGSFDLRTSLSVMELARALERATDRLAGAGGLLRDH VLADLSK
Sequences:
>Translated_647_residues MKSDIIERLGESEILLPSLIQDGLHANDQVKLRLAVLQAAARRAQNPTVPPFDLQDECRAAGIDPLPMETLVQNARLVDP GRISAPGLDTLAAAIWQDVTTMANSVKAGDQTAGEAGLARLAALQAALKDKPENQGPADTMAVTRIAQLGALSAHHEDSL HRLVMDLHKALNQLAAAHAEEICAGAHVYGLTPEDRPLVEAFMRGLESTRKLKFNHPGLATTAMRSTGKLVIQNDIGETE AHVVVITIDPAAVTITYTDVHLDRARFFANLFDAFAVQWSGLERKDAQGIGDEEPFYLTTGRFAAVDQAHRSAFLAALGS SLVFLIDWNKARKLLRTWMSKADAGHILEWAARNRFGHRAFLELGGGDLIASAVRNTTPTRIGFGERLDHALGREAAVDF LKNALRVASETLLAGSSVRLARDRIEADLMRRLQSVDSSLLSIVVRQAGLARDIADAIAHLIAARSKGQAIDADRAAANA RHIEEKADRMAVAARVEIARLNADRAIESLVNRVEETIDEFEQAAFIASLIPEDLPADLLKPLGDLSAAAVGSTQAMAIG AVAAMDVPQGQRVDTEDALEACVQLADYEHRADEAERTLTRLVLRGSFDLRTSLSVMELARALERATDRLAGAGGLLRDH VLADLSK >Mature_647_residues MKSDIIERLGESEILLPSLIQDGLHANDQVKLRLAVLQAAARRAQNPTVPPFDLQDECRAAGIDPLPMETLVQNARLVDP GRISAPGLDTLAAAIWQDVTTMANSVKAGDQTAGEAGLARLAALQAALKDKPENQGPADTMAVTRIAQLGALSAHHEDSL HRLVMDLHKALNQLAAAHAEEICAGAHVYGLTPEDRPLVEAFMRGLESTRKLKFNHPGLATTAMRSTGKLVIQNDIGETE AHVVVITIDPAAVTITYTDVHLDRARFFANLFDAFAVQWSGLERKDAQGIGDEEPFYLTTGRFAAVDQAHRSAFLAALGS SLVFLIDWNKARKLLRTWMSKADAGHILEWAARNRFGHRAFLELGGGDLIASAVRNTTPTRIGFGERLDHALGREAAVDF LKNALRVASETLLAGSSVRLARDRIEADLMRRLQSVDSSLLSIVVRQAGLARDIADAIAHLIAARSKGQAIDADRAAANA RHIEEKADRMAVAARVEIARLNADRAIESLVNRVEETIDEFEQAAFIASLIPEDLPADLLKPLGDLSAAAVGSTQAMAIG AVAAMDVPQGQRVDTEDALEACVQLADYEHRADEAERTLTRLVLRGSFDLRTSLSVMELARALERATDRLAGAGGLLRDH VLADLSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69814; Mature: 69814
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSDIIERLGESEILLPSLIQDGLHANDQVKLRLAVLQAAARRAQNPTVPPFDLQDECRA CCCHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH AGIDPLPMETLVQNARLVDPGRISAPGLDTLAAAIWQDVTTMANSVKAGDQTAGEAGLAR CCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LAALQAALKDKPENQGPADTMAVTRIAQLGALSAHHEDSLHRLVMDLHKALNQLAAAHAE HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EICAGAHVYGLTPEDRPLVEAFMRGLESTRKLKFNHPGLATTAMRSTGKLVIQNDIGETE HHHCCCEEECCCCCCCHHHHHHHHHHHHHHCEECCCCCCHHHHHHCCCCEEEECCCCCCC AHVVVITIDPAAVTITYTDVHLDRARFFANLFDAFAVQWSGLERKDAQGIGDEEPFYLTT CEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEC GRFAAVDQAHRSAFLAALGSSLVFLIDWNKARKLLRTWMSKADAGHILEWAARNRFGHRA CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCH FLELGGGDLIASAVRNTTPTRIGFGERLDHALGREAAVDFLKNALRVASETLLAGSSVRL HEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHH ARDRIEADLMRRLQSVDSSLLSIVVRQAGLARDIADAIAHLIAARSKGQAIDADRAAANA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH RHIEEKADRMAVAARVEIARLNADRAIESLVNRVEETIDEFEQAAFIASLIPEDLPADLL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH KPLGDLSAAAVGSTQAMAIGAVAAMDVPQGQRVDTEDALEACVQLADYEHRADEAERTLT HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RLVLRGSFDLRTSLSVMELARALERATDRLAGAGGLLRDHVLADLSK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure MKSDIIERLGESEILLPSLIQDGLHANDQVKLRLAVLQAAARRAQNPTVPPFDLQDECRA CCCHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH AGIDPLPMETLVQNARLVDPGRISAPGLDTLAAAIWQDVTTMANSVKAGDQTAGEAGLAR CCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LAALQAALKDKPENQGPADTMAVTRIAQLGALSAHHEDSLHRLVMDLHKALNQLAAAHAE HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EICAGAHVYGLTPEDRPLVEAFMRGLESTRKLKFNHPGLATTAMRSTGKLVIQNDIGETE HHHCCCEEECCCCCCCHHHHHHHHHHHHHHCEECCCCCCHHHHHHCCCCEEEECCCCCCC AHVVVITIDPAAVTITYTDVHLDRARFFANLFDAFAVQWSGLERKDAQGIGDEEPFYLTT CEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEC GRFAAVDQAHRSAFLAALGSSLVFLIDWNKARKLLRTWMSKADAGHILEWAARNRFGHRA CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCH FLELGGGDLIASAVRNTTPTRIGFGERLDHALGREAAVDFLKNALRVASETLLAGSSVRL HEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHH ARDRIEADLMRRLQSVDSSLLSIVVRQAGLARDIADAIAHLIAARSKGQAIDADRAAANA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH RHIEEKADRMAVAARVEIARLNADRAIESLVNRVEETIDEFEQAAFIASLIPEDLPADLL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH KPLGDLSAAAVGSTQAMAIGAVAAMDVPQGQRVDTEDALEACVQLADYEHRADEAERTLT HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RLVLRGSFDLRTSLSVMELARALERATDRLAGAGGLLRDHVLADLSK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA